Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33970 Brassica napus
A07p14260 Brassica napus
A07p17830 Brassica napus
A08p03170 Brassica napus
A09p42070 Brassica napus
Aa31LG7G6560 Aethionema arabicum
Aa31sc1035G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2494 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3982 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3985 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.827 Anthoceros agrestis
Actinidia02573 Actinidia chinensis
Actinidia23337 Actinidia chinensis
Ah.05g178240 Amaranthus hybridus
AL1G36200 Arabidopsis lyrata
AL6G39960 Arabidopsis lyrata
Aqoxy1G03086 Aquilegia oxysepala
Aqoxy1G03087 Aquilegia oxysepala
Aqoxy4G00115 Aquilegia oxysepala
Aqoxy5G00310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3C4BUC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5UEM0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8YT8MI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.984TS9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BB8XW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JS4MJM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9M74Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG3J5R Arachis hypogaea
AT1G22660 Arabidopsis thaliana
ATR0584G032 Amborella trichopoda
Atru.chr13.1730 Acer truncatum
Atru.chr4.2860 Acer truncatum
AUR62004635 Chenopodium quinoa
AUR62022701 Chenopodium quinoa
BcaB02g06958 Brassica carinata
BcaB03g14189 Brassica carinata
BcaB03g14191 Brassica carinata
BcaB04g19874 Brassica carinata
BcaB08g37366 Brassica carinata
BcaC04g23493 Brassica carinata
BcaC05g24852 Brassica carinata
BcaC06g34982 Brassica carinata
BcaC06g34983 Brassica carinata
BcaC07g41804 Brassica carinata
BcaC07g41805 Brassica carinata
BcaC07g41808 Brassica carinata
BolC2t08717H Brassica oleracea
BolC3t18170H Brassica oleracea
BolC5t29644H Brassica oleracea
BolC5t30873H Brassica oleracea
BolC5t33088H Brassica oleracea
BolC7t42629H Brassica oleracea
BolC9t53690H Brassica oleracea
BraA06t23950Z Brassica rapa
BraA07t29183Z Brassica rapa
BraA08t32349Z Brassica rapa
BraA09t39693Z Brassica rapa
C02p26430 Brassica napus
C03p59090 Brassica napus
C05p08980 Brassica napus
C05p21800 Brassica napus
C07p20980 Brassica napus
C08p48680 Brassica napus
C09p07730 Brassica napus
CAN.G761.16 Capsicum annuum
CANSAT54G2022 Cannabis sativa
CARHR023030 Cardamine hirsuta
CARHR023040 Cardamine hirsuta
CARHR103970 Cardamine hirsuta
CARHR114710 Cardamine hirsuta
CARHR163290 Cardamine hirsuta
CARHR163300 Cardamine hirsuta
Carub.0001s2218 Capsella rubella
Ca_10624_v3 Cicer arietinum L.
Cc10_g11590 Coffea canephora
Cc10_g11600 Coffea canephora
CDE04G1174 Ceratophyllum demersum
Cfa015122 Carpinus fangiana
Cfa023620 Carpinus fangiana
Ciclev10000691m.g Citrus clementina
CiPaw.05G166400 Carya illinoinensis
ClCG08G008700 Citrullus lanatus
COL.COLO4_23637 Corchorus olitorius
Cpa.g.sc66.29 Carica papaya
Cre17.g726000 Chlamydomonas reinhardtii
Cre17.g726100 Chlamydomonas reinhardtii
CsaV3_6G004730 Cucumis sativus L.
CSS0019088 Camellia sinensis var. sinensis
DCAR_001058 Daucus carota
Dinv15069 Davidia involucrata
Duzib177G0575 Durio zibethinus
ECA232G2507 Erigeron canadensis
ECA238G1828 Erigeron canadensis
EL10Ac1g00094 Beta vulgaris
Eucgr.F02594 Eucalyptus grandis
Eucgr.F02604 Eucalyptus grandis
Eucgr.F02738 Eucalyptus grandis
Eucgr.F03976 Eucalyptus grandis
Eucgr.K02157 Eucalyptus grandis
Eucgr.L00378 Eucalyptus grandis
FAN07G1831 Fragaria x ananassa
FAN12G1608 Fragaria x ananassa
FAN17G0376 Fragaria x ananassa
FAN22G1178 Fragaria x ananassa
FvH4_4g33440 Fragaria vesca
Glyma.10G217700 Glycine max
Glyma.20G174400 Glycine max
Gohir.A05G250400 Gossypium hirsutum
Gohir.D05G253400 Gossypium hirsutum
Gorai.009G263600 Gossypium raimondii
GSVIVG01034848001 Vitis vinifera
GSVIVG01034864001 Vitis vinifera
HanXRQChr09g0263631 Helianthus annuus
HanXRQChr14g0449031 Helianthus annuus
HanXRQChr15g0490731 Helianthus annuus
Haze_01552 Corylus avellana
Haze_01553 Corylus avellana
Hma1.2p1_0523F.1_g172030 Hydrangea macrophylla
HPP92_003659 Vanilla planifolia
HPP92_003668 Vanilla planifolia
Hund27091 Selenicereus undatus
Lalb_Chr06g0161951 Lupinus albus
Lj4A473G33 Lonicera japonica
Lj4A474G12 Lonicera japonica
Lj5A617G14 Lonicera japonica
Lj5A618G15 Lonicera japonica
Lj5A627G15 Lonicera japonica
Lj5A627T18 Lonicera japonica
Lj5A629T17 Lonicera japonica
Lj5A629T18 Lonicera japonica
Lj5A633T18 Lonicera japonica
Lj5A634G3 Lonicera japonica
Lj5A638G8 Lonicera japonica
Lj5A645T12 Lonicera japonica
Lj5A650G23 Lonicera japonica
Lj5A652T14 Lonicera japonica
Lj5A654G16 Lonicera japonica
Lj5A655T26 Lonicera japonica
Lj5A657T12 Lonicera japonica
Lj5A658G21 Lonicera japonica
Lj5A659G19 Lonicera japonica
Lj5A669G10 Lonicera japonica
Lj5A669G11 Lonicera japonica
Lj5A669G12 Lonicera japonica
Lj5C622G3 Lonicera japonica
Lj5C636G2 Lonicera japonica
Lj5C648G5 Lonicera japonica
Lj5E638T0 Lonicera japonica
Lj5g0020162 Lotus japonicus
Lj5P626T11 Lonicera japonica
Lj5P629G11 Lonicera japonica
Lj6g0007045 Lotus japonicus
Lj8A206G29 Lonicera japonica
LjContig00141g0028023 Lotus japonicus
Lsat_1_v5_gn_3_11000 Lactuca sativa
Lsat_1_v5_gn_4_165000 Lactuca sativa
Lsat_1_v5_gn_4_165020 Lactuca sativa
Lsat_1_v5_gn_6_104880 Lactuca sativa
Lsat_1_v5_gn_6_104920 Lactuca sativa
Manes.18G102400 Manihot esculenta
Mapoly0174s0023 Marchantia polymorpha
MBI16_g07686_MAGBIO Magnolia biondii
MCO07G705 Micromonas commoda
MD05G1045700 Malus domestica
MD10G1052700 Malus domestica
Medtr1g096810 Medicago truncatula
Medtr1g096870 Medicago truncatula
MELO3C019943.2 Cucumis melo
Migut.C01266 Erythranthe guttata
Nitab4.5_0000167g0140 Nicotiana tabacum
Nitab4.5_0000881g0030 Nicotiana tabacum
Nitab4.5_0000881g0040 Nicotiana tabacum
Nitab4.5_0001579g0100 Nicotiana tabacum
Nn5g27660 Nelumbo nucifera
Oeu021213.2 Olea europaea
Oeu045162.1 Olea europaea
Os12g0171200 Oryza sativa ssp. japonica
Peaxi162Scf00296g00815 Petunia axillaris
Peaxi162Scf01013g00225 Petunia axillaris
Peaxi162Scf01013g00232 Petunia axillaris
PGR042G3223 Punica granatum
Phvul.007G088400 Phaseolus vulgaris
Potri.013G111300 Populus trichocarpa
Pp3c4_17390 Physcomitrium patens
PRCOL_00003563 Prasinoderma coloniale
Prupe.6G147900 Prunus persica
Psat6g173240 Pisum sativum
PSO063G6902 Papaver somniferum
PSO170G5134 Papaver somniferum
PSO210G0794 Papaver somniferum
PSO339G0065 Papaver somniferum
PSO339G2349 Papaver somniferum
PSO832G2735 Papaver somniferum
QL03p042862 Quercus lobata
QL08p012793 Quercus lobata
QL08p012947 Quercus lobata
RcHm_v2.0_Chr2g0141651 Rosa chinensis
RcHm_v2.0_Chr3g0457671 Rosa chinensis
RcHm_v2.0_Chr4g0411681 Rosa chinensis
RcHm_v2.0_Chr4g0411721 Rosa chinensis
RcHm_v2.0_Chr4g0411731 Rosa chinensis
RcHm_v2.0_Chr4g0411851 Rosa chinensis
RcHm_v2.0_Chr4g0411861 Rosa chinensis
RcHm_v2.0_Chr4g0411871 Rosa chinensis
RcHm_v2.0_Chr4g0412001 Rosa chinensis
RcHm_v2.0_Chr4g0412011 Rosa chinensis
RcHm_v2.0_Chr4g0442691 Rosa chinensis
RcHm_v2.0_Chr5g0054011 Rosa chinensis
RcHm_v2.0_Chr7g0192731 Rosa chinensis
RcHm_v2.0_Chr7g0217301 Rosa chinensis
RcHm_v2.0_Chr7g0217311 Rosa chinensis
Rhsim03G0083700 Rhododendron simsii
Rhsim06G0031300 Rhododendron simsii
Rhsim13G0146000 Rhododendron simsii
Rhsim13G0160800 Rhododendron simsii
RhsimUnG0109800 Rhododendron simsii
SalBow7G0542 Salvia bowleyana
Sc01g0001830 Simmondsia chinensis
Sed0000900 Sechium edule
Sed0017641 Sechium edule
SEGI_41053 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32501 Striga asiatica
SGA_v2.0_scaffold24G10561 Striga asiatica
SHI09025 Sapria himalayana
SHI09030 Sapria himalayana
SMO111G0069 Selaginella moellendorffii
SMO111G0222 Selaginella moellendorffii
SMO172G0205 Selaginella moellendorffii
SMO351G0253 Selaginella moellendorffii
SMO351G0639 Selaginella moellendorffii
Solyc11g018770.3 Solanum lycopersicum
Solyc11g018810.2 Solanum lycopersicum
Sopen11g009830 Solanum pennellii
Sopen11g009950 Solanum pennellii
Sp1g20170 Schrenkiella parvula
Sp4g24780 Schrenkiella parvula
TAR381G1193 Trochodendron aralioides
THA.LOC104809739 Tarenaya hassleriana
Thecc.08G185200 Theobroma cacao
Thecc.10G143100 Theobroma cacao
Thhalv10007128m.g Eutrema salsugineum
TPR.G15701 Trifolium pratense
TWI34G1193 Tripterygium wilfordii
TWI60G0671 Tripterygium wilfordii
unitig_747.g21798 Utricularia gibba
vmacro12482 Vaccinium macrocarpon
VMungo0720G1634 Vigna mungo
Zm00001eb267240 Zea mays
Zm00001eb381950 Zea mays
Zm00001eb408070 Zea mays

User provided reference genes

Program Settings