Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38340 Brassica napus
A05p18910 Brassica napus
A05p33610 Brassica napus
A06p01750 Brassica napus
Aa31LG10G2440 Aethionema arabicum
Aa31LG8G2960 Aethionema arabicum
Actinidia01753 Actinidia chinensis
Actinidia15774 Actinidia chinensis
Actinidia21981 Actinidia chinensis
Actinidia25100 Actinidia chinensis
Actinidia40476 Actinidia chinensis
AL1G60820 Arabidopsis lyrata
AL3G28420 Arabidopsis lyrata
Aqoxy7G02215 Aquilegia oxysepala
Aqoxy7G03691 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3WRP69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66WDLV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A8WRUN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSE12S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8JN66 Arachis hypogaea
AT1G52565 Arabidopsis thaliana
AT3G15760 Arabidopsis thaliana
Atru.chr1.2990 Acer truncatum
Atru.chr7.1142 Acer truncatum
AUR62011138 Chenopodium quinoa
BcaB02g10984 Brassica carinata
BcaB04g20905 Brassica carinata
BcaB06g25687 Brassica carinata
BcaC05g28933 Brassica carinata
BcaC08g43429 Brassica carinata
BcaC08g43430 Brassica carinata
BcaC08g44003 Brassica carinata
BcaC09g48555 Brassica carinata
BolC1t04821H Brassica oleracea
BolC5t33807H Brassica oleracea
BolC6t35882H Brassica oleracea
BolC6t36589H Brassica oleracea
BraA01t03885Z Brassica rapa
BraA05t20788Z Brassica rapa
BraA05t22185Z Brassica rapa
BraA06t23394Z Brassica rapa
C01p48670 Brassica napus
C05p50610 Brassica napus
C06p07990 Brassica napus
C06p14110 Brassica napus
CAN.G403.8 Capsicum annuum
CANSAT11G2365 Cannabis sativa
CANSAT56G1388 Cannabis sativa
CANSAT78G2290 Cannabis sativa
CARHR042690 Cardamine hirsuta
CARHR090850 Cardamine hirsuta
Carub.0001s4153 Capsella rubella
Carub.0003s1550 Capsella rubella
Ca_21675_v3 Cicer arietinum L.
Cc04_g04270 Coffea canephora
Cc06_g08410 Coffea canephora
CDE04G0331 Ceratophyllum demersum
Cfa001976 Carpinus fangiana
Cfa003385 Carpinus fangiana
Ciclev10009903m.g Citrus clementina
Ciclev10026775m.g Citrus clementina
CiPaw.01G246400 Carya illinoinensis
CiPaw.02G156300 Carya illinoinensis
CiPaw.03G244800 Carya illinoinensis
CiPaw.04G171600 Carya illinoinensis
ClCG06G011200 Citrullus lanatus
ClCG07G012650 Citrullus lanatus
COL.COLO4_12950 Corchorus olitorius
COL.COLO4_35114 Corchorus olitorius
Cpa.g.sc10.256 Carica papaya
Cpa.g.sc46.5 Carica papaya
CsaV3_1G030210 Cucumis sativus L.
CsaV3_4G001540 Cucumis sativus L.
CSS0022572 Camellia sinensis var. sinensis
CSS0041896 Camellia sinensis var. sinensis
DCAR_014886 Daucus carota
DCAR_017810 Daucus carota
DCAR_020919 Daucus carota
Dinv30594 Davidia involucrata
Dinv36518 Davidia involucrata
Duzib150G0461 Durio zibethinus
Duzib160G0702 Durio zibethinus
Duzib168G0478 Durio zibethinus
Duzib187G0530 Durio zibethinus
Duzib235G1225 Durio zibethinus
ECA234G1831 Erigeron canadensis
ECA240G3055 Erigeron canadensis
EL10Ac8g18667 Beta vulgaris
EL10Ac9g21912 Beta vulgaris
Eucgr.C01181 Eucalyptus grandis
Eucgr.C04223 Eucalyptus grandis
FAN02G3379 Fragaria x ananassa
FAN05G1526 Fragaria x ananassa
FAN09G3789 Fragaria x ananassa
FAN14G2484 Fragaria x ananassa
FAN19G2709 Fragaria x ananassa
FAN23G2585 Fragaria x ananassa
FAN26G2290 Fragaria x ananassa
FvH4_1g03160 Fragaria vesca
FvH4_6g29910 Fragaria vesca
Glyma.04G147200 Glycine max
Glyma.07G031000 Glycine max
Glyma.08G211800 Glycine max
Glyma.13G166500 Glycine max
Glyma.13G365000 Glycine max
Glyma.15G008300 Glycine max
Glyma.17G114300 Glycine max
Gohir.A05G016000 Gossypium hirsutum
Gohir.A05G125833 Gossypium hirsutum
Gohir.A05G125900 Gossypium hirsutum
Gohir.A07G036200 Gossypium hirsutum
Gohir.A10G074300 Gossypium hirsutum
Gohir.D05G017100 Gossypium hirsutum
Gohir.D05G126800 Gossypium hirsutum
Gohir.D07G040200 Gossypium hirsutum
Gohir.D10G077100 Gossypium hirsutum
Gorai.001G042500 Gossypium raimondii
Gorai.009G017300 Gossypium raimondii
Gorai.009G130900 Gossypium raimondii
Gorai.011G083300 Gossypium raimondii
GSVIVG01015544001 Vitis vinifera
GSVIVG01017318001 Vitis vinifera
HanXRQChr04g0096561 Helianthus annuus
HanXRQChr05g0138371 Helianthus annuus
HanXRQChr05g0140201 Helianthus annuus
HanXRQChr09g0241961 Helianthus annuus
HanXRQChr10g0315561 Helianthus annuus
HanXRQChr12g0356261 Helianthus annuus
Haze_25567 Corylus avellana
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla
Hma1.2p1_1962F.1_g309240 Hydrangea macrophylla
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla
Hma1.2p1_3201F.1_g333909 Hydrangea macrophylla
Hund00526 Selenicereus undatus
Hund06567 Selenicereus undatus
Hund09249 Selenicereus undatus
Hund26508 Selenicereus undatus
Lalb_Chr01g0012401 Lupinus albus
Lalb_Chr07g0178991 Lupinus albus
Lalb_Chr10g0096781 Lupinus albus
Lalb_Chr13g0301821 Lupinus albus
Lalb_Chr25g0279401 Lupinus albus
Lj3g0008770 Lotus japonicus
Lj3g0013801 Lotus japonicus
Lj4g0007884 Lotus japonicus
Lsat_1_v5_gn_5_95300 Lactuca sativa
Lsat_1_v5_gn_7_45161 Lactuca sativa
Lsat_1_v5_gn_8_58521 Lactuca sativa
Manes.04G113800 Manihot esculenta
Manes.06G058000 Manihot esculenta
Manes.11G055700 Manihot esculenta
Manes.14G132900 Manihot esculenta
MBI04_g24597_MAGBIO Magnolia biondii
MD02G1030600 Malus domestica
MD15G1172200 Malus domestica
MD17G1209300 Malus domestica
Medtr2g103750 Medicago truncatula
Medtr4g010530 Medicago truncatula
Medtr4g114600 Medicago truncatula
MELO3C010338.2 Cucumis melo
MELO3C017886.2 Cucumis melo
Migut.I00776 Erythranthe guttata
Migut.K00449 Erythranthe guttata
MSTRG.10674 Avicennia marina
MSTRG.11135 Avicennia marina
Nitab4.5_0000028g0360 Nicotiana tabacum
Nitab4.5_0000373g0020 Nicotiana tabacum
Nitab4.5_0001764g0140 Nicotiana tabacum
Nitab4.5_0005728g0010 Nicotiana tabacum
Nitab4.5_0006661g0030 Nicotiana tabacum
Nn2g12041 Nelumbo nucifera
Nn2g12045 Nelumbo nucifera
Nn8g39466 Nelumbo nucifera
Oeu027807.1 Olea europaea
Oeu034104.1 Olea europaea
Oeu045136.1 Olea europaea
Oeu045145.1 Olea europaea
Oeu058050.1 Olea europaea
Peaxi162Scf00046g00524 Petunia axillaris
Peaxi162Scf00332g00756 Petunia axillaris
PGR031G0668 Punica granatum
PGR142G4319 Punica granatum
PGSC0003DMG400000615 Solanum tuberosum
PGSC0003DMG400019894 Solanum tuberosum
PGSC0003DMG400028537 Solanum tuberosum
PGSC0003DMG400028538 Solanum tuberosum
Phvul.003G165200 Phaseolus vulgaris
Phvul.005G177400 Phaseolus vulgaris
Phvul.010G155100 Phaseolus vulgaris
Potri.001G192800 Populus trichocarpa
Potri.006G069100 Populus trichocarpa
Potri.018G131100 Populus trichocarpa
Prupe.3G084900 Prunus persica
Prupe.7G243900 Prunus persica
Psat4g039800 Pisum sativum
Psat5g302120 Pisum sativum
Psat7g255440 Pisum sativum
PSO063G4123 Papaver somniferum
PSO170G3914 Papaver somniferum
PSO210G1692 Papaver somniferum
PSO210G3002 Papaver somniferum
PSO210G4958 Papaver somniferum
PSO210G5441 Papaver somniferum
QL02p088621 Quercus lobata
QL05p029455 Quercus lobata
QL09p026717 Quercus lobata
RcHm_v2.0_Chr2g0088291 Rosa chinensis
RcHm_v2.0_Chr2g0135861 Rosa chinensis
Rhsim01G0069000 Rhododendron simsii
Sabra06G0051500 Salix brachista
Sabra18G0111200 Salix brachista
SalBow1G1971 Salvia bowleyana
Sc08g0006550 Simmondsia chinensis
Sc10g0005850 Simmondsia chinensis
Sc18g0000570 Simmondsia chinensis
Sed0015979 Sechium edule
Sed0016112 Sechium edule
Sed0016169 Sechium edule
Sed0025517 Sechium edule
Sed0027515 Sechium edule
SGA_v2.0_scaffold37G14775 Striga asiatica
SGA_v2.0_scaffold5G02683 Striga asiatica
Solyc03g116630.3 Solanum lycopersicum
Solyc06g068100.1 Solanum lycopersicum
Solyc06g068110.3 Solanum lycopersicum
Solyc07g008280.4 Solanum lycopersicum
Sopen03g035550 Solanum pennellii
Sopen07g004170 Solanum pennellii
Sp1g39120 Schrenkiella parvula
Sp3g14090 Schrenkiella parvula
TAR383G0328 Trochodendron aralioides
TAR626G0616 Trochodendron aralioides
THA.LOC104808985 Tarenaya hassleriana
THA.LOC104815531 Tarenaya hassleriana
Thecc.06G021700 Theobroma cacao
Thecc.09G127400 Theobroma cacao
Thhalv10011857m.g Eutrema salsugineum
Thhalv10021746m.g Eutrema salsugineum
TPR.G26478 Trifolium pratense
TPR.G37180 Trifolium pratense
TPR.G38648 Trifolium pratense
TWI18G1221 Tripterygium wilfordii
TWI32G0299 Tripterygium wilfordii
TWI63G1461 Tripterygium wilfordii
vmacro18989 Vaccinium macrocarpon
vmacro20564 Vaccinium macrocarpon
VMungo0331G0585 Vigna mungo
VMungo1080G1568 Vigna mungo
VMungo1215G1272 Vigna mungo

User provided reference genes

Program Settings