Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p40250 Brassica napus
A08p30240 Brassica napus
A09p59730 Brassica napus
Aa31LG4G4680 Aethionema arabicum
Aa31LG4G4690 Aethionema arabicum
Aa31LG7G3510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1807 Anthoceros agrestis
Actinidia04878 Actinidia chinensis
Actinidia19027 Actinidia chinensis
Actinidia19030 Actinidia chinensis
Actinidia31911 Actinidia chinensis
Actinidia35007 Actinidia chinensis
Ah.11g048300 Amaranthus hybridus
AL1G31190 Arabidopsis lyrata
Aqoxy3G03448 Aquilegia oxysepala
Aqoxy3G03449 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DUY636 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KYYT2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4QGBD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VBN6HW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHJ0M8 Arachis hypogaea
AT1G18720 Arabidopsis thaliana
AT1G74440 Arabidopsis thaliana
Atru.chr1.3587 Acer truncatum
Atru.chr11.1753 Acer truncatum
Atru.chr11.1754 Acer truncatum
AUR62021653 Chenopodium quinoa
AUR62022198 Chenopodium quinoa
BcaB03g12964 Brassica carinata
BcaB03g14482 Brassica carinata
BcaC07g38940 Brassica carinata
BcaC07g38941 Brassica carinata
BcaC07g41297 Brassica carinata
BcaC08g46874 Brassica carinata
BcaC08g46998 Brassica carinata
BcaNung06502 Brassica carinata
BolC6t39892H Brassica oleracea
BolC8t49513H Brassica oleracea
BolC8t51862H Brassica oleracea
BraA07t31569Z Brassica rapa
BraA08t34957Z Brassica rapa
BraA09t41349Z Brassica rapa
C06p48620 Brassica napus
C08p18880 Brassica napus
C08p43070 Brassica napus
CAN.G868.2 Capsicum annuum
CANSAT64G1004 Cannabis sativa
CANSAT80G0392 Cannabis sativa
CARHR019350 Cardamine hirsuta
CARHR019360 Cardamine hirsuta
CARHR067710 Cardamine hirsuta
Carub.0001s1837 Capsella rubella
Carub.0002s2121 Capsella rubella
Ca_25963_v3 Cicer arietinum L.
CBR_g36924 Chara braunii
Cc04_g16310 Coffea canephora
CDE02G3493 Ceratophyllum demersum
CDE08G0334 Ceratophyllum demersum
Cfa008956 Carpinus fangiana
Cfa018924 Carpinus fangiana
Ciclev10022301m.g Citrus clementina
CiPaw.05G132400 Carya illinoinensis
CiPaw.11G046300 Carya illinoinensis
ClCG04G012140 Citrullus lanatus
ClCG06G016100 Citrullus lanatus
COL.COLO4_22936 Corchorus olitorius
COL.COLO4_22937 Corchorus olitorius
COL.COLO4_28330 Corchorus olitorius
Cpa.g.sc111.21 Carica papaya
Cre12.g499650 Chlamydomonas reinhardtii
CsaV3_1G002430 Cucumis sativus L.
CsaV3_1G005630 Cucumis sativus L.
CSS0001138 Camellia sinensis var. sinensis
CSS0002779 Camellia sinensis var. sinensis
CSS0026505 Camellia sinensis var. sinensis
DCAR_026062 Daucus carota
Dinv10645 Davidia involucrata
Dinv16672 Davidia involucrata
Dinv38732 Davidia involucrata
Duzib068G0198 Durio zibethinus
Duzib084G0511 Durio zibethinus
ECA234G4386 Erigeron canadensis
ECA246G2847 Erigeron canadensis
EL10Ac5g11045 Beta vulgaris
Eucgr.B00526 Eucalyptus grandis
Eucgr.B00527 Eucalyptus grandis
Eucgr.G02487 Eucalyptus grandis
Eucgr.K02488 Eucalyptus grandis
FAN07G1097 Fragaria x ananassa
FAN08G1283 Fragaria x ananassa
FAN12G3694 Fragaria x ananassa
FAN13G0925 Fragaria x ananassa
FAN17G1821 Fragaria x ananassa
FAN18G4392 Fragaria x ananassa
FAN22G0899 Fragaria x ananassa
FvH4_3g16710 Fragaria vesca
FvH4_4g31090 Fragaria vesca
FvH4_5g14680 Fragaria vesca
Glyma.02G109700 Glycine max
Glyma.04G167300 Glycine max
Glyma.06G195300 Glycine max
Gohir.A07G064600 Gossypium hirsutum
Gohir.A09G204400 Gossypium hirsutum
Gohir.A12G164200 Gossypium hirsutum
Gohir.D07G069500 Gossypium hirsutum
Gohir.D08G163040 Gossypium hirsutum
Gohir.D09G198100 Gossypium hirsutum
Gohir.D12G167200 Gossypium hirsutum
Gorai.001G072900 Gossypium raimondii
Gorai.002G134700 Gossypium raimondii
Gorai.004G169500 Gossypium raimondii
Gorai.006G221700 Gossypium raimondii
Gorai.007G038000 Gossypium raimondii
Gorai.008G180100 Gossypium raimondii
GSVIVG01007984001 Vitis vinifera
GSVIVG01019954001 Vitis vinifera
HanXRQChr05g0156021 Helianthus annuus
HanXRQChr05g0156031 Helianthus annuus
HanXRQChr12g0378711 Helianthus annuus
Haze_07308 Corylus avellana
Haze_11985 Corylus avellana
Hma1.2p1_0060F.1_g033630 Hydrangea macrophylla
Hma1.2p1_0637F.1_g193610 Hydrangea macrophylla
Hma1.2p1_1079F.1_g254950 Hydrangea macrophylla
HPP92_002364 Vanilla planifolia
HPP92_027590 Vanilla planifolia
Hund02635 Selenicereus undatus
Lalb_Chr17g0340871 Lupinus albus
Lalb_Chr23g0273731 Lupinus albus
Lj1g0021770 Lotus japonicus
Lj2g0012649 Lotus japonicus
Lj3A1035G49 Lonicera japonica
Lj5A109G74 Lonicera japonica
Lsat_1_v5_gn_4_10841 Lactuca sativa
Lsat_1_v5_gn_5_20801 Lactuca sativa
Manes.05G104500 Manihot esculenta
Manes.06G090700 Manihot esculenta
Manes.14G080300 Manihot esculenta
Mapoly0034s0023 Marchantia polymorpha
MCO14G112 Micromonas commoda
MD05G1207600 Malus domestica
MD05G1207900 Malus domestica
MD05G1208000 Malus domestica
MD06G1195800 Malus domestica
MD10G1177000 Malus domestica
MD10G1177500 Malus domestica
MD10G1194700 Malus domestica
MD13G1069400 Malus domestica
MD14G1202900 Malus domestica
MD16G1069800 Malus domestica
Medtr3g435170 Medicago truncatula
Medtr3g435200 Medicago truncatula
Medtr3g435230 Medicago truncatula
Medtr3g435250 Medicago truncatula
Medtr5g041930 Medicago truncatula
MELO3C001995.2 Cucumis melo
MELO3C017183.2 Cucumis melo
Migut.I00197 Erythranthe guttata
Migut.I00199 Erythranthe guttata
MSTRG.23009 Avicennia marina
Nitab4.5_0001125g0060 Nicotiana tabacum
Nitab4.5_0003381g0010 Nicotiana tabacum
Nitab4.5_0005226g0030 Nicotiana tabacum
Nitab4.5_0005914g0010 Nicotiana tabacum
Nitab4.5_0008840g0020 Nicotiana tabacum
Nn1g04530 Nelumbo nucifera
Nn3g17295 Nelumbo nucifera
Nn4g23222 Nelumbo nucifera
Oeu047280.1 Olea europaea
Oeu052440.1 Olea europaea
Os02g0578800 Oryza sativa ssp. japonica
Os08g0433600 Oryza sativa ssp. japonica
Os10g0407200 Oryza sativa ssp. japonica
Peaxi162Scf00106g00312 Petunia axillaris
Peaxi162Scf00106g00322 Petunia axillaris
Peaxi162Scf00274g00455 Petunia axillaris
PGR083G1589 Punica granatum
PGR119G1332 Punica granatum
PGSC0003DMG400019524 Solanum tuberosum
Phvul.003G045500 Phaseolus vulgaris
Phvul.009G186100 Phaseolus vulgaris
Potri.008G088800 Populus trichocarpa
Potri.010G166500 Populus trichocarpa
Pp3c16_2460 Physcomitrium patens
Pp3c5_4470 Physcomitrium patens
Pp3c6_23150 Physcomitrium patens
PRCOL_00000125 Prasinoderma coloniale
PRCOL_00003566 Prasinoderma coloniale
Prupe.1G277300 Prunus persica
Prupe.4G149500 Prunus persica
Prupe.4G149600 Prunus persica
Prupe.5G195600 Prunus persica
Psat2g116560 Pisum sativum
Psat5g193880 Pisum sativum
Psat5g200840 Pisum sativum
Psat5g201120 Pisum sativum
PSO013G0380 Papaver somniferum
PSO017G3335 Papaver somniferum
PSO832G3408 Papaver somniferum
QL03p068150 Quercus lobata
QL10p017325 Quercus lobata
RcHm_v2.0_Chr4g0439471 Rosa chinensis
RcHm_v2.0_Chr5g0027821 Rosa chinensis
RcHm_v2.0_Chr7g0181721 Rosa chinensis
Rhsim08G0153100 Rhododendron simsii
Rhsim12G0065100 Rhododendron simsii
Rhsim12G0154900 Rhododendron simsii
Rhsim12G0155100 Rhododendron simsii
Sabra08G0066600 Salix brachista
Sabra10G0126600 Salix brachista
SalBow5G1381 Salvia bowleyana
Sc04g0002760 Simmondsia chinensis
Sed0006748 Sechium edule
Sed0008016 Sechium edule
Sed0014595 Sechium edule
Sed0026463 Sechium edule
Sed0027423 Sechium edule
SEGI_32609 Sequoiadendron giganteum
SEGI_35181 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10921 Striga asiatica
SHI10775 Sapria himalayana
SHI10778 Sapria himalayana
SMO201G0064 Selaginella moellendorffii
Solyc03g115860.3 Solanum lycopersicum
Sopen03g034850 Solanum pennellii
Sp1g16730 Schrenkiella parvula
Sp5g29610 Schrenkiella parvula
TAR371G0856 Trochodendron aralioides
TAR629G0483 Trochodendron aralioides
THA.LOC104812540 Tarenaya hassleriana
Thecc.02G342900 Theobroma cacao
Thecc.03G091300 Theobroma cacao
Thhalv10008782m.g Eutrema salsugineum
Thhalv10019143m.g Eutrema salsugineum
TPR.G11961 Trifolium pratense
TPR.G11964 Trifolium pratense
TPR.G34700 Trifolium pratense
TWI32G1124 Tripterygium wilfordii
TWI60G0123 Tripterygium wilfordii
TWI60G0606 Tripterygium wilfordii
TWI81G0673 Tripterygium wilfordii
unitig_26.g9649 Utricularia gibba
vmacro01272 Vaccinium macrocarpon
vmacro16530 Vaccinium macrocarpon
vmacro16532 Vaccinium macrocarpon
vmacro16538 Vaccinium macrocarpon
vmacro17530 Vaccinium macrocarpon
vmacro23355 Vaccinium macrocarpon
VMungo1309G2064 Vigna mungo
Zm00001eb041480 Zea mays
Zm00001eb245020 Zea mays

User provided reference genes

Program Settings