Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p10090 Brassica napus
Aa31LG2G2010 Aethionema arabicum
Aa31LG9G18030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3920 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5260 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5261 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5264 Anthoceros agrestis
Actinidia04680 Actinidia chinensis
Actinidia06833 Actinidia chinensis
Actinidia37553 Actinidia chinensis
Actinidia37554 Actinidia chinensis
Actinidia39980 Actinidia chinensis
Ah.02g118370 Amaranthus hybridus
Ah.02g121020 Amaranthus hybridus
Ah.02g121130 Amaranthus hybridus
Ah.06g187970 Amaranthus hybridus
AL7G43640 Arabidopsis lyrata
Aqoxy5G00131 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33UQPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB472D Arachis hypogaea
AT5G32470 Arabidopsis thaliana
ATR0787G107 Amborella trichopoda
Atru.chr2.1110 Acer truncatum
AUR62000632 Chenopodium quinoa
AUR62006985 Chenopodium quinoa
BcaB04g18093 Brassica carinata
BcaC07g37707 Brassica carinata
BolC8t48073H Brassica oleracea
BraA08t33006Z Brassica rapa
CAN.G536.13 Capsicum annuum
CAN.G694.8 Capsicum annuum
CAN.G94.6 Capsicum annuum
CANSAT54G3003 Cannabis sativa
CARHR217090 Cardamine hirsuta
Carub.0007s3054 Capsella rubella
Ca_10029_v3 Cicer arietinum L.
Ca_31187_v3 Cicer arietinum L.
CBR_g38827 Chara braunii
CBR_g64517 Chara braunii
Cc09_g02980 Coffea canephora
CDE02G0381 Ceratophyllum demersum
CDE02G1172 Ceratophyllum demersum
CDE08G1574 Ceratophyllum demersum
Cfa002487 Carpinus fangiana
Ciclev10023610m.g Citrus clementina
Ciclev10030905m.g Citrus clementina
CiPaw.03G271200 Carya illinoinensis
CiPaw.04G190900 Carya illinoinensis
CiPaw.07G070800 Carya illinoinensis
ClCG03G011470 Citrullus lanatus
COL.COLO4_10203 Corchorus olitorius
COL.COLO4_15534 Corchorus olitorius
Cpa.g.sc51.3 Carica papaya
Cpa.g.sc87.31 Carica papaya
Cpa.g.sc87.32 Carica papaya
CsaV3_1G045030 Cucumis sativus L.
CSS0008677 Camellia sinensis var. sinensis
CSS0008679 Camellia sinensis var. sinensis
CSS0016056 Camellia sinensis var. sinensis
CSS0021606 Camellia sinensis var. sinensis
CSS0028111 Camellia sinensis var. sinensis
CSS0039225 Camellia sinensis var. sinensis
DCAR_005516 Daucus carota
Dinv07505 Davidia involucrata
Dinv11352 Davidia involucrata
Dinv19266 Davidia involucrata
Duzib106G0100 Durio zibethinus
Duzib128G1958 Durio zibethinus
Duzib133G0998 Durio zibethinus
Duzib138G0150 Durio zibethinus
Duzib177G0935 Durio zibethinus
ECA233G3395 Erigeron canadensis
ECA238G0995 Erigeron canadensis
EL10Ac2g03423 Beta vulgaris
EL10Ac4g09201 Beta vulgaris
EL10Ac4g09762 Beta vulgaris
Eucgr.A01666 Eucalyptus grandis
Eucgr.H04213 Eucalyptus grandis
FAN01G0416 Fragaria x ananassa
FAN05G0538 Fragaria x ananassa
FAN05G2066 Fragaria x ananassa
FAN09G1477 Fragaria x ananassa
FAN14G2846 Fragaria x ananassa
FAN14G4679 Fragaria x ananassa
FAN15G0236 Fragaria x ananassa
FAN24G0357 Fragaria x ananassa
FAN27G2178 Fragaria x ananassa
FvH4_2g20480 Fragaria vesca
FvH4_6g01520 Fragaria vesca
FvH4_7g32680 Fragaria vesca
Glyma.10G164300 Glycine max
Glyma.20G226700 Glycine max
Gohir.A07G152600 Gossypium hirsutum
Gohir.A08G217800 Gossypium hirsutum
Gohir.A11G244600 Gossypium hirsutum
Gohir.D07G158800 Gossypium hirsutum
Gohir.D08G234800 Gossypium hirsutum
Gohir.D11G254700 Gossypium hirsutum
Gorai.001G182000 Gossypium raimondii
Gorai.004G249600 Gossypium raimondii
Gorai.007G273300 Gossypium raimondii
GSVIVG01001480001 Vitis vinifera
GSVIVG01028433001 Vitis vinifera
HanXRQChr10g0280201 Helianthus annuus
HanXRQChr11g0327251 Helianthus annuus
HanXRQChr12g0384431 Helianthus annuus
HanXRQChr14g0431491 Helianthus annuus
HanXRQChr14g0442421 Helianthus annuus
HanXRQChr14g0443151 Helianthus annuus
HanXRQChr15g0471721 Helianthus annuus
Haze_04394 Corylus avellana
Haze_05820 Corylus avellana
Haze_24709 Corylus avellana
Hma1.2p1_0130F.1_g060480 Hydrangea macrophylla
HPP92_022080 Vanilla planifolia
HPP92_025821 Vanilla planifolia
Hund07176 Selenicereus undatus
Lalb_Chr02g0148991 Lupinus albus
Lj1A74G101 Lonicera japonica
Lj2A46T69 Lonicera japonica
Lj5g0022875 Lotus japonicus
Lj8A197T37 Lonicera japonica
Lj8A197T38 Lonicera japonica
Lsat_1_v5_gn_1_91120 Lactuca sativa
Lsat_1_v5_gn_2_16740 Lactuca sativa
Lsat_1_v5_gn_8_2520 Lactuca sativa
Lsat_1_v5_gn_9_11541 Lactuca sativa
Manes.08G140900 Manihot esculenta
Manes.08G141500 Manihot esculenta
Manes.09G146900 Manihot esculenta
Manes.13G039600 Manihot esculenta
Mapoly0010s0041 Marchantia polymorpha
Mapoly0061s0052 Marchantia polymorpha
Mapoly0068s0016 Marchantia polymorpha
MBI16_g02733_MAGBIO Magnolia biondii
MD04G1232700 Malus domestica
MD05G1188600 Malus domestica
MD12G1250300 Malus domestica
MD13G1252100 Malus domestica
Medtr1g080470 Medicago truncatula
MELO3C010087.2 Cucumis melo
Migut.F02056 Erythranthe guttata
Migut.N02233 Erythranthe guttata
MSTRG.12516 Avicennia marina
MSTRG.8171 Avicennia marina
Nitab4.5_0000476g0220 Nicotiana tabacum
Nitab4.5_0000841g0010 Nicotiana tabacum
Nitab4.5_0000845g0210 Nicotiana tabacum
Nitab4.5_0002088g0010 Nicotiana tabacum
Nitab4.5_0002435g0030 Nicotiana tabacum
Nitab4.5_0010891g0030 Nicotiana tabacum
Nn1g02994 Nelumbo nucifera
Nn3g19799 Nelumbo nucifera
Oeu010185.1 Olea europaea
Oeu014442.1 Olea europaea
Oeu052082.1 Olea europaea
Os08g0566000 Oryza sativa ssp. japonica
Peaxi162Scf00043g00272 Petunia axillaris
Peaxi162Scf00077g00094 Petunia axillaris
Peaxi162Scf00156g00620 Petunia axillaris
PGR004G1282 Punica granatum
PGSC0003DMG400008580 Solanum tuberosum
Phvul.008G137801 Phaseolus vulgaris
Potri.013G049300 Populus trichocarpa
Potri.019G022700 Populus trichocarpa
Pp3c12_23680 Physcomitrium patens
Prupe.3G079400 Prunus persica
Prupe.3G079500 Prunus persica
Prupe.6G352500 Prunus persica
Prupe.8G215100 Prunus persica
Psat2g027640 Pisum sativum
Psat6g144200 Pisum sativum
Psat7g152280 Pisum sativum
PSO017G4785 Papaver somniferum
PSO017G6320 Papaver somniferum
PSO063G2995 Papaver somniferum
PSO063G5378 Papaver somniferum
PSO170G2226 Papaver somniferum
PSO210G1137 Papaver somniferum
PSO210G5952 Papaver somniferum
PSO384G1289 Papaver somniferum
PSO478G0119 Papaver somniferum
PSO478G0721 Papaver somniferum
PSO478G2140 Papaver somniferum
PSO478G2203 Papaver somniferum
PSO478G3100 Papaver somniferum
PSO478G3934 Papaver somniferum
PSO478G5084 Papaver somniferum
PSO764G0261 Papaver somniferum
PSO782G0519 Papaver somniferum
PSO782G1353 Papaver somniferum
PSO782G3433 Papaver somniferum
PSO782G5609 Papaver somniferum
PSO832G0576 Papaver somniferum
PSO832G3832 Papaver somniferum
QL03p029148 Quercus lobata
QL09p041531 Quercus lobata
RcHm_v2.0_Chr3g0449211 Rosa chinensis
RcHm_v2.0_Chr5g0058131 Rosa chinensis
RcHm_v2.0_Chr6g0286581 Rosa chinensis
Sabra13G0045500 Salix brachista
SalBow1G0650 Salvia bowleyana
SalBow1G8628 Salvia bowleyana
SalBow6G3005 Salvia bowleyana
Sc09g0001850 Simmondsia chinensis
Sc16g0009790 Simmondsia chinensis
Sc16g0010200 Simmondsia chinensis
Sc22g0004590 Simmondsia chinensis
Sc22g0004630 Simmondsia chinensis
Sc22g0004640 Simmondsia chinensis
Sed0005304 Sechium edule
Sed0024644 Sechium edule
SEGI_16383 Sequoiadendron giganteum
SGA_v2.0_scaffold329G48830 Striga asiatica
SGA_v2.0_scaffold42G16173 Striga asiatica
SGA_v2.0_scaffold62G21468 Striga asiatica
SHI23917 Sapria himalayana
SHI23919 Sapria himalayana
SHI23920 Sapria himalayana
SMO146G0226 Selaginella moellendorffii
SMO203G0094 Selaginella moellendorffii
Solyc04g050190.4 Solanum lycopersicum
Solyc05g055900.3 Solanum lycopersicum
Solyc09g064510.3 Solanum lycopersicum
Sopen04g020910 Solanum pennellii
Sopen05g034300 Solanum pennellii
Sopen09g025670 Solanum pennellii
Sp7g07700 Schrenkiella parvula
TAR362G1135 Trochodendron aralioides
TAR365G0402 Trochodendron aralioides
TAR365G1151 Trochodendron aralioides
TAR633G0934 Trochodendron aralioides
TAR636G2335 Trochodendron aralioides
THA.LOC104823789 Tarenaya hassleriana
Thecc.01G249900 Theobroma cacao
Thecc.05G266800 Theobroma cacao
Thhalv10002337m.g Eutrema salsugineum
TPR.G26625 Trifolium pratense
TWI32G1314 Tripterygium wilfordii
TWI60G0984 Tripterygium wilfordii
TWI75G0335 Tripterygium wilfordii
unitig_88.g27818 Utricularia gibba
unitig_88.g27819 Utricularia gibba
vmacro02711 Vaccinium macrocarpon
vmacro19980 Vaccinium macrocarpon
VMungo0464G0340 Vigna mungo
VMungo0720G1032 Vigna mungo
VMungo1309G2282 Vigna mungo
Zm00001eb038600 Zea mays
Zm00001eb175630 Zea mays
Zm00001eb287020 Zea mays
Zm00001eb337100 Zea mays

User provided reference genes

Program Settings