Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21950 Brassica napus
A07p14720 Brassica napus
A07p43280 Brassica napus
Aa31LG7G6120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2390 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5398 Anthoceros agrestis
Actinidia10303 Actinidia chinensis
Actinidia29581 Actinidia chinensis
Actinidia30753 Actinidia chinensis
Ah.05g170300 Amaranthus hybridus
AL1G35620 Arabidopsis lyrata
AL2G38340 Arabidopsis lyrata
Aqoxy6G00578 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15115S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6P73LQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AW0T7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C0PD3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D94WWA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GC4H4D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFN5SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7BQUH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7EZWZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4VZKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XE0D19 Arachis hypogaea
AT1G22170 Arabidopsis thaliana
AT1G78050 Arabidopsis thaliana
ATR0564G038 Amborella trichopoda
Atru.chr13.1258 Acer truncatum
Atru.chr4.141 Acer truncatum
AUR62027722 Chenopodium quinoa
BcaB03g14230 Brassica carinata
BcaB03g15970 Brassica carinata
BcaB05g25095 Brassica carinata
BcaC03g15785 Brassica carinata
BcaC06g34935 Brassica carinata
BcaC08g47376 Brassica carinata
BolC2t09545H Brassica oleracea
BolC6t40219H Brassica oleracea
BolC7t42696H Brassica oleracea
BraA02t07199Z Brassica rapa
BraA07t29216Z Brassica rapa
BraA07t31849Z Brassica rapa
C02p35280 Brassica napus
C06p51960 Brassica napus
C07p21640 Brassica napus
CAN.G344.4 Capsicum annuum
CAN.G517.11 Capsicum annuum
CANSAT25G1506 Cannabis sativa
CARHR022520 Cardamine hirsuta
CARHR071500 Cardamine hirsuta
Carub.0001s2172 Capsella rubella
Carub.0002s2493 Capsella rubella
Ca_15232_v3 Cicer arietinum L.
Ca_17720_v3 Cicer arietinum L.
Ca_28672_v3 Cicer arietinum L.
CBR_g19456 Chara braunii
Cc00_g03460 Coffea canephora
Cc07_g15470 Coffea canephora
Cc10_g07520 Coffea canephora
Cfa015919 Carpinus fangiana
Ciclev10001708m.g Citrus clementina
Ciclev10027051m.g Citrus clementina
CiPaw.05G235500 Carya illinoinensis
CiPaw.06G021300 Carya illinoinensis
ClCG01G018930 Citrullus lanatus
ClCG08G010960 Citrullus lanatus
COL.COLO4_07338 Corchorus olitorius
COL.COLO4_09930 Corchorus olitorius
COL.COLO4_16448 Corchorus olitorius
Cpa.g.sc20.232 Carica papaya
Cpa.g.sc66.85 Carica papaya
Cre03.g166950 Chlamydomonas reinhardtii
CsaV3_1G022960 Cucumis sativus L.
CsaV3_6G045610 Cucumis sativus L.
CSS0014962 Camellia sinensis var. sinensis
CSS0020632 Camellia sinensis var. sinensis
CSS0035978 Camellia sinensis var. sinensis
CSS0042751 Camellia sinensis var. sinensis
DCAR_008712 Daucus carota
DCAR_014238 Daucus carota
Dinv13037 Davidia involucrata
Dinv44750 Davidia involucrata
Duzib093G0935 Durio zibethinus
Duzib116G0181 Durio zibethinus
ECA232G0248 Erigeron canadensis
ECA232G4840 Erigeron canadensis
ECA246G1581 Erigeron canadensis
ECA247G2472 Erigeron canadensis
EL10Ac1g01261 Beta vulgaris
Eucgr.F00493 Eucalyptus grandis
Eucgr.F02446 Eucalyptus grandis
FAN04G2074 Fragaria x ananassa
FAN08G3591 Fragaria x ananassa
FAN13G0679 Fragaria x ananassa
FAN18G1952 Fragaria x ananassa
FAN19G0730 Fragaria x ananassa
FAN23G2488 Fragaria x ananassa
FAN26G1685 Fragaria x ananassa
FvH4_1g21310 Fragaria vesca
FvH4_5g37930 Fragaria vesca
Glyma.04G104500 Glycine max
Glyma.05G180500 Glycine max
Glyma.06G105600 Glycine max
Glyma.08G138100 Glycine max
Glyma.08G144433 Glycine max
Glyma.13G087800 Glycine max
Glyma.14G170700 Glycine max
Gohir.A02G131601 Gossypium hirsutum
Gohir.A02G131602 Gossypium hirsutum
Gohir.A05G228800 Gossypium hirsutum
Gohir.A06G037800 Gossypium hirsutum
Gohir.D03G043033 Gossypium hirsutum
Gohir.D03G043066 Gossypium hirsutum
Gohir.D05G231200 Gossypium hirsutum
Gohir.D06G039300 Gossypium hirsutum
Gorai.003G043800 Gossypium raimondii
Gorai.003G043900 Gossypium raimondii
Gorai.009G239400 Gossypium raimondii
Gorai.010G043600 Gossypium raimondii
GSVIVG01008997001 Vitis vinifera
HanXRQChr04g0112961 Helianthus annuus
HanXRQChr05g0162211 Helianthus annuus
HanXRQChr08g0227731 Helianthus annuus
Haze_00576 Corylus avellana
Hma1.2p1_0070F.1_g037510 Hydrangea macrophylla
Hma1.2p1_0120F.1_g057150 Hydrangea macrophylla
HPP92_011234 Vanilla planifolia
HPP92_027690 Vanilla planifolia
Hund26948 Selenicereus undatus
Lalb_Chr07g0185061 Lupinus albus
Lalb_Chr08g0241901 Lupinus albus
Lalb_Chr11g0065531 Lupinus albus
Lj1g0015985 Lotus japonicus
Lj1g0022328 Lotus japonicus
Lj2A553T24 Lonicera japonica
Lj4A107T51 Lonicera japonica
Lj4A715G32 Lonicera japonica
Lj4g0027660 Lotus japonicus
Lsat_1_v5_gn_1_4200 Lactuca sativa
Lsat_1_v5_gn_4_141480 Lactuca sativa
Lsat_1_v5_gn_6_102220 Lactuca sativa
Manes.02G154900 Manihot esculenta
Manes.13G091200 Manihot esculenta
Manes.18G069600 Manihot esculenta
Mapoly0015s0021 Marchantia polymorpha
Mapoly0022s0059 Marchantia polymorpha
Mapoly0022s0061 Marchantia polymorpha
Mapoly0072s0053 Marchantia polymorpha
MBI02_g30891_MAGBIO Magnolia biondii
MBI05_g34461_MAGBIO Magnolia biondii
MD01G1025800 Malus domestica
MD08G1179400 Malus domestica
MD15G1327600 Malus domestica
MD15G1364700 Malus domestica
Medtr3g074040 Medicago truncatula
Medtr8g091330 Medicago truncatula
MELO3C007772.2 Cucumis melo
MELO3C011367.2 Cucumis melo
Migut.H02379 Erythranthe guttata
Migut.O00462 Erythranthe guttata
MSTRG.23331 Avicennia marina
MSTRG.24473 Avicennia marina
Nitab4.5_0000469g0140 Nicotiana tabacum
Nitab4.5_0003496g0070 Nicotiana tabacum
Nitab4.5_0003807g0040 Nicotiana tabacum
Nitab4.5_0006859g0050 Nicotiana tabacum
Nitab4.5_0006859g0060 Nicotiana tabacum
Nn5g29047 Nelumbo nucifera
Oeu024551.3 Olea europaea
Oeu038416.1 Olea europaea
Oeu056587.1 Olea europaea
Oeu057379.2 Olea europaea
Os02g0751800 Oryza sativa ssp. japonica
Os06g0223200 Oryza sativa ssp. japonica
Peaxi162Scf00041g00213 Petunia axillaris
Peaxi162Scf00422g00514 Petunia axillaris
PGR042G0296 Punica granatum
PGSC0003DMG400009472 Solanum tuberosum
PGSC0003DMG400020629 Solanum tuberosum
PGSC0003DMG400025059 Solanum tuberosum
Phvul.002G261600 Phaseolus vulgaris
Phvul.008G171600 Phaseolus vulgaris
Phvul.009G029000 Phaseolus vulgaris
Potri.002G093300 Populus trichocarpa
Potri.005G078100 Populus trichocarpa
Potri.005G168000 Populus trichocarpa
Pp3c15_210 Physcomitrium patens
Pp3c15_8070 Physcomitrium patens
Pp3c16_19380 Physcomitrium patens
Pp3c20_7870 Physcomitrium patens
Pp3c25_6590 Physcomitrium patens
Pp3c5_24760 Physcomitrium patens
PRCOL_00000572 Prasinoderma coloniale
PRCOL_00002625 Prasinoderma coloniale
PRCOL_00003877 Prasinoderma coloniale
PRCOL_00003965 Prasinoderma coloniale
PRCOL_00006060 Prasinoderma coloniale
Prupe.1G512500 Prunus persica
Prupe.6G181400 Prunus persica
Psat5g136760 Pisum sativum
Psat7g053560 Pisum sativum
PSO133G0074 Papaver somniferum
PSO541G6158 Papaver somniferum
QL06p050034 Quercus lobata
QL12p036093 Quercus lobata
RcHm_v2.0_Chr2g0115141 Rosa chinensis
RcHm_v2.0_Chr7g0239871 Rosa chinensis
Rhsim06G0084900 Rhododendron simsii
Rhsim07G0200900 Rhododendron simsii
Rhsim10G0158400 Rhododendron simsii
Rhsim10G0158700 Rhododendron simsii
Sabra02G0073600 Salix brachista
Sabra05G0064100 Salix brachista
Sabra05G0126400 Salix brachista
SalBow3G2122 Salvia bowleyana
Sc01g0000110 Simmondsia chinensis
Sc01g0000230 Simmondsia chinensis
Sed0027122 Sechium edule
SEGI_08594 Sequoiadendron giganteum
SEGI_13859 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31531 Striga asiatica
SGA_v2.0_scaffold28G11937 Striga asiatica
SHI09372 Sapria himalayana
SMO119G0437 Selaginella moellendorffii
Solyc04g054820.3 Solanum lycopersicum
Solyc04g072800.4 Solanum lycopersicum
Sopen04g024620 Solanum pennellii
Sopen04g028970 Solanum pennellii
Sp1g19670 Schrenkiella parvula
Sp5g33180 Schrenkiella parvula
TAR381G0622 Trochodendron aralioides
TAR625G1041 Trochodendron aralioides
THA.LOC104800160 Tarenaya hassleriana
Thecc.08G110900 Theobroma cacao
Thhalv10008087m.g Eutrema salsugineum
Thhalv10018866m.g Eutrema salsugineum
TPR.G2209 Trifolium pratense
TPR.G35204 Trifolium pratense
TWI12G0114 Tripterygium wilfordii
TWI53G0386 Tripterygium wilfordii
TWI56G0313 Tripterygium wilfordii
unitig_21.g20598 Utricularia gibba
vmacro04760 Vaccinium macrocarpon
vmacro12945 Vaccinium macrocarpon
vmacro21232 Vaccinium macrocarpon
VMungo0251G2156 Vigna mungo
VMungo1309G2251 Vigna mungo
Zm00001eb019180 Zea mays
Zm00001eb192190 Zea mays
Zm00001eb194260 Zea mays
Zm00001eb249000 Zea mays
Zm00001eb266900 Zea mays

User provided reference genes

Program Settings