Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p65400 Brassica napus
Aa31LG1G5380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2691 Anthoceros agrestis
Actinidia00896 Actinidia chinensis
Actinidia16251 Actinidia chinensis
Actinidia29978 Actinidia chinensis
Actinidia38525 Actinidia chinensis
Actinidia38526 Actinidia chinensis
Ah.01g021420 Amaranthus hybridus
Ah.11g041020 Amaranthus hybridus
AL1G20150 Arabidopsis lyrata
AL1G57770 Arabidopsis lyrata
AL3G33560 Arabidopsis lyrata
Aqoxy2G02985 Aquilegia oxysepala
Aqoxy6G00851 Aquilegia oxysepala
Aqoxy6G01787 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3AX6CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQPQ35 Arachis hypogaea
AT1G09620 Arabidopsis thaliana
ATR1120G086 Amborella trichopoda
Atru.chr6.460 Acer truncatum
Atru.chr6.461 Acer truncatum
Atru.chr8.1477 Acer truncatum
AUR62007553 Chenopodium quinoa
AUR62007554 Chenopodium quinoa
AUR62029614 Chenopodium quinoa
AUR62033656 Chenopodium quinoa
AUR62034730 Chenopodium quinoa
AUR62034823 Chenopodium quinoa
AUR62042448 Chenopodium quinoa
AUR62044762 Chenopodium quinoa
BcaB03g13308 Brassica carinata
BcaB03g13309 Brassica carinata
BcaC07g38524 Brassica carinata
BcaC07g41869 Brassica carinata
BolC5t29518H Brassica oleracea
BolC8t48936H Brassica oleracea
BolC8t52473H Brassica oleracea
BraA09t41885Z Brassica rapa
C05p07670 Brassica napus
C08p13060 Brassica napus
C08p13070 Brassica napus
C08p49360 Brassica napus
CAN.G1222.4 Capsicum annuum
CAN.G533.4 Capsicum annuum
CANSAT56G1406 Cannabis sativa
CARHR040170 Cardamine hirsuta
CARHR189180 Cardamine hirsuta
Carub.0001s0897 Capsella rubella
Carub.0001s3928 Capsella rubella
Ca_20190_v3 Cicer arietinum L.
CBR_g949 Chara braunii
Cc03_g11150 Coffea canephora
CDE04G0595 Ceratophyllum demersum
CDE12G0193 Ceratophyllum demersum
Cfa010638 Carpinus fangiana
Ciclev10000088m.g Citrus clementina
CiPaw.05G003300 Carya illinoinensis
ClCG03G002180 Citrullus lanatus
COL.COLO4_05227 Corchorus olitorius
COL.COLO4_12093 Corchorus olitorius
COL.COLO4_36050 Corchorus olitorius
Cpa.g.sc113.23 Carica papaya
Cre06.g293582 Chlamydomonas reinhardtii
CsaV3_1G012830 Cucumis sativus L.
CSS0003972 Camellia sinensis var. sinensis
CSS0035217 Camellia sinensis var. sinensis
DCAR_004333 Daucus carota
Dinv29610 Davidia involucrata
Duzib128G0674 Durio zibethinus
Duzib154G0001 Durio zibethinus
Duzib177G0256 Durio zibethinus
Duzib177G0909 Durio zibethinus
Duzib177G1145 Durio zibethinus
ECA236G1270 Erigeron canadensis
ECA236G3591 Erigeron canadensis
ECA246G0320 Erigeron canadensis
EL10Ac1g00169 Beta vulgaris
EL10Ac1g01012 Beta vulgaris
Eucgr.H01506 Eucalyptus grandis
FAN02G1521 Fragaria x ananassa
FAN11G0599 Fragaria x ananassa
FAN11G0782 Fragaria x ananassa
FAN12G0641 Fragaria x ananassa
FAN14G3682 Fragaria x ananassa
FAN16G1040 Fragaria x ananassa
FAN17G1379 Fragaria x ananassa
FAN17G2712 Fragaria x ananassa
FAN19G2929 Fragaria x ananassa
FAN21G0454 Fragaria x ananassa
FAN22G1089 Fragaria x ananassa
FAN22G1138 Fragaria x ananassa
FAN22G1588 Fragaria x ananassa
FAN23G0252 Fragaria x ananassa
FAN26G2788 Fragaria x ananassa
FAN28G0165 Fragaria x ananassa
FvH4_1g25930 Fragaria vesca
FvH4_3g34581 Fragaria vesca
FvH4_4g33690 Fragaria vesca
FvH4_4g33700 Fragaria vesca
FvH4_4g33710 Fragaria vesca
FvH4_4g33720 Fragaria vesca
FvH4_6g33010 Fragaria vesca
Glyma.01G208100 Glycine max
Glyma.11G034100 Glycine max
Gohir.A11G237100 Gossypium hirsutum
Gohir.D11G247600 Gossypium hirsutum
Gorai.007G263900 Gossypium raimondii
GSVIVG01023222001 Vitis vinifera
GSVIVG01036435001 Vitis vinifera
HanXRQChr11g0338201 Helianthus annuus
HanXRQChr12g0378191 Helianthus annuus
Haze_03584 Corylus avellana
Haze_10026 Corylus avellana
Haze_26736 Corylus avellana
Hma1.2p1_0207F.1_g087750 Hydrangea macrophylla
Hma1.2p1_1179F.1_g264530 Hydrangea macrophylla
HPP92_001141 Vanilla planifolia
Hund03390 Selenicereus undatus
Lalb_Chr09g0324331 Lupinus albus
Lalb_Chr16g0379531 Lupinus albus
Lalb_Chr23g0275461 Lupinus albus
Lalb_Chr23g0275471 Lupinus albus
Lalb_Chr23g0275481 Lupinus albus
Lj1g0009096 Lotus japonicus
Lj2g0020826 Lotus japonicus
Lj3g0011514 Lotus japonicus
Lj4C21T0 Lonicera japonica
Lj6g0005327 Lotus japonicus
Lj7P691T6 Lonicera japonica
Lsat_1_v5_gn_5_36420 Lactuca sativa
Manes.07G026300 Manihot esculenta
Manes.10G115700 Manihot esculenta
Mapoly0153s0002 Marchantia polymorpha
MBI06_g06679_MAGBIO Magnolia biondii
MBI18_g35649_MAGBIO Magnolia biondii
MBI18_g35650_MAGBIO Magnolia biondii
MCO07G647 Micromonas commoda
MD08G1244600 Malus domestica
MD15G1439400 Malus domestica
Medtr3g058530 Medicago truncatula
Medtr3g058540 Medicago truncatula
Medtr7g006440 Medicago truncatula
Medtr7g006450 Medicago truncatula
MELO3C005060.2 Cucumis melo
Migut.F01705 Erythranthe guttata
Migut.F01948 Erythranthe guttata
MSTRG.392 Avicennia marina
MSTRG.8129 Avicennia marina
Nitab4.5_0000020g0270 Nicotiana tabacum
Nitab4.5_0001431g0010 Nicotiana tabacum
Nitab4.5_0001431g0020 Nicotiana tabacum
Nitab4.5_0008538g0020 Nicotiana tabacum
Nitab4.5_0012056g0010 Nicotiana tabacum
Nn7g37033 Nelumbo nucifera
Oeu015074.1 Olea europaea
Oeu046641.1 Olea europaea
Os05g0241100 Oryza sativa ssp. japonica
Os09g0378300 Oryza sativa ssp. japonica
Os09g0503400 Oryza sativa ssp. japonica
Peaxi162Scf00016g00195 Petunia axillaris
PGR042G0883 Punica granatum
PGSC0003DMG400010338 Solanum tuberosum
PGSC0003DMG400013102 Solanum tuberosum
Phvul.002G085100 Phaseolus vulgaris
Potri.003G003900 Populus trichocarpa
Potri.004G226700 Populus trichocarpa
Pp3c1_8450 Physcomitrium patens
Pp3c1_8463 Physcomitrium patens
PRCOL_00005770 Prasinoderma coloniale
Prupe.1G582000 Prunus persica
Prupe.2G015100 Prunus persica
Prupe.2G123100 Prunus persica
Prupe.4G275400 Prunus persica
Psat1g141760 Pisum sativum
Psat5g136160 Pisum sativum
Psat5g170080 Pisum sativum
Psat7g192520 Pisum sativum
PSO017G1340 Papaver somniferum
PSO063G4363 Papaver somniferum
PSO732G0021 Papaver somniferum
QL12p006954 Quercus lobata
QL12p006967 Quercus lobata
QL12p006975 Quercus lobata
RcHm_v2.0_Chr1g0336121 Rosa chinensis
RcHm_v2.0_Chr1g0353811 Rosa chinensis
RcHm_v2.0_Chr1g0373331 Rosa chinensis
RcHm_v2.0_Chr4g0443171 Rosa chinensis
RcHm_v2.0_Chr4g0443181 Rosa chinensis
RcHm_v2.0_Chr4g0443191 Rosa chinensis
RcHm_v2.0_Chr4g0443201 Rosa chinensis
RcHm_v2.0_Chr4g0443211 Rosa chinensis
Rhsim04G0223200 Rhododendron simsii
Rhsim09G0006800 Rhododendron simsii
Rhsim12G0004200 Rhododendron simsii
Rhsim12G0137900 Rhododendron simsii
Sabra01G0172100 Salix brachista
Sabra03G0002000 Salix brachista
SalBow1G4786 Salvia bowleyana
SalBow6G6103 Salvia bowleyana
Sc18g0002120 Simmondsia chinensis
Sed0008782 Sechium edule
Sed0009276 Sechium edule
Sed0026141 Sechium edule
SEGI_07104 Sequoiadendron giganteum
SEGI_37954 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01349 Striga asiatica
SGA_v2.0_scaffold55G19876 Striga asiatica
SHI16267 Sapria himalayana
SMO116G0053 Selaginella moellendorffii
SMO269G0046 Selaginella moellendorffii
SMO364G0771 Selaginella moellendorffii
Solyc02g065300.1 Solanum lycopersicum
Solyc02g069140.3 Solanum lycopersicum
Sopen02g015450 Solanum pennellii
Sopen02g018270 Solanum pennellii
Sp1g08230 Schrenkiella parvula
TAR381G0578 Trochodendron aralioides
TAR624G0185 Trochodendron aralioides
TAR624G0429 Trochodendron aralioides
TAR624G1351 Trochodendron aralioides
TAR636G0048 Trochodendron aralioides
TAR636G0400 Trochodendron aralioides
TAR636G0910 Trochodendron aralioides
TAR636G1391 Trochodendron aralioides
THA.LOC104816828 Tarenaya hassleriana
THA.LOC104823704 Tarenaya hassleriana
Thecc.05G252500 Theobroma cacao
Thecc.09G271700 Theobroma cacao
Thecc.09G271800 Theobroma cacao
Thhalv10006633m.g Eutrema salsugineum
Thhalv10009411m.g Eutrema salsugineum
Thhalv10027096m.g Eutrema salsugineum
Thhalv10028099m.g Eutrema salsugineum
TPR.G10087 Trifolium pratense
TPR.G30745 Trifolium pratense
TWI63G1090 Tripterygium wilfordii
TWI74G0802 Tripterygium wilfordii
TWI75G0155 Tripterygium wilfordii
TWI75G0223 Tripterygium wilfordii
TWI75G0549 Tripterygium wilfordii
TWI75G0673 Tripterygium wilfordii
TWI75G1681 Tripterygium wilfordii
unitig_736.g22329 Utricularia gibba
unitig_899.g15041 Utricularia gibba
vmacro00845 Vaccinium macrocarpon
vmacro00846 Vaccinium macrocarpon
vmacro00925 Vaccinium macrocarpon
vmacro16725 Vaccinium macrocarpon
VMungo1215G1077 Vigna mungo
Zm00001eb067180 Zea mays
Zm00001eb097790 Zea mays

User provided reference genes

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