Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p15550 Brassica napus
A06p09900 Brassica napus
Aa31LG1G1140 Aethionema arabicum
Aa31LG9G16700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1772 Anthoceros agrestis
Actinidia32303 Actinidia chinensis
Ah.02g126890 Amaranthus hybridus
Ah.03g138930 Amaranthus hybridus
Ah.03g138940 Amaranthus hybridus
AL1G25620 Arabidopsis lyrata
AL7G51240 Arabidopsis lyrata
Aqoxy3G00504 Aquilegia oxysepala
Aqoxy3G03629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8CPX3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8EVV8T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CVB38J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S065VF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9Q985 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9WNSP Arachis hypogaea
AT1G13820 Arabidopsis thaliana
AT5G39220 Arabidopsis thaliana
ATR0064G049 Amborella trichopoda
Atru.chr11.1632 Acer truncatum
AUR62003107 Chenopodium quinoa
AUR62003109 Chenopodium quinoa
AUR62007922 Chenopodium quinoa
AUR62007924 Chenopodium quinoa
BcaB02g06479 Brassica carinata
BcaB06g27280 Brassica carinata
BcaB06g27736 Brassica carinata
BcaC02g08854 Brassica carinata
BcaC02g09684 Brassica carinata
BcaC05g25287 Brassica carinata
BolC4t26140H Brassica oleracea
BolC4t26572H Brassica oleracea
BolC5t29913H Brassica oleracea
BraA04t17190Z Brassica rapa
BraA06t24178Z Brassica rapa
C04p45590 Brassica napus
C04p49810 Brassica napus
C05p11660 Brassica napus
C09p60370 Brassica napus
CAN.G616.36 Capsicum annuum
CAN.G616.37 Capsicum annuum
CAN.G616.38 Capsicum annuum
CANSAT64G1552 Cannabis sativa
CANSAT64G2642 Cannabis sativa
CARHR014210 Cardamine hirsuta
CARHR263190 Cardamine hirsuta
Carub.0001s1354 Capsella rubella
Carub.0007s3670 Capsella rubella
Ca_04962_v3 Cicer arietinum L.
Ca_18801_v3 Cicer arietinum L.
CBR_g10860 Chara braunii
Cc00_g13210 Coffea canephora
Cc07_g04180 Coffea canephora
Cc11_g03930 Coffea canephora
Cc11_g03940 Coffea canephora
Cc11_g12060 Coffea canephora
CDE02G2959 Ceratophyllum demersum
CDE05G2662 Ceratophyllum demersum
CDE10G0148 Ceratophyllum demersum
Cfa007660 Carpinus fangiana
Cfa007664 Carpinus fangiana
Cfa008884 Carpinus fangiana
Ciclev10031818m.g Citrus clementina
CiPaw.03G088900 Carya illinoinensis
CiPaw.05G125700 Carya illinoinensis
ClCG07G016380 Citrullus lanatus
ClCG08G010370 Citrullus lanatus
COL.COLO4_27892 Corchorus olitorius
Cpa.g.sc1.120 Carica papaya
Cpa.g.sc14.170 Carica papaya
Cre03.g152800 Chlamydomonas reinhardtii
CsaV3_4G009200 Cucumis sativus L.
CsaV3_6G032560 Cucumis sativus L.
CsaV3_6G033640 Cucumis sativus L.
CSS0005163 Camellia sinensis var. sinensis
CSS0022215 Camellia sinensis var. sinensis
CSS0030332 Camellia sinensis var. sinensis
DCAR_023804 Daucus carota
DCAR_027472 Daucus carota
Dinv34073 Davidia involucrata
Duzib147G1402 Durio zibethinus
Duzib187G0034 Durio zibethinus
Duzib251G0235 Durio zibethinus
Duzib264G0486 Durio zibethinus
ECA233G2116 Erigeron canadensis
ECA246G4444 Erigeron canadensis
EL10Ac4g08696 Beta vulgaris
EL10Ac6g14979 Beta vulgaris
EL10Ac6g14992 Beta vulgaris
Eucgr.B03156 Eucalyptus grandis
Eucgr.I02027 Eucalyptus grandis
Eucgr.L02857 Eucalyptus grandis
FAN02G3808 Fragaria x ananassa
FAN05G1893 Fragaria x ananassa
FAN05G5830 Fragaria x ananassa
FAN07G0002 Fragaria x ananassa
FAN09G2778 Fragaria x ananassa
FAN12G0360 Fragaria x ananassa
FAN14G0350 Fragaria x ananassa
FAN17G1405 Fragaria x ananassa
FvH4_4g30130 Fragaria vesca
FvH4_6g46920 Fragaria vesca
Glyma.01G058400 Glycine max
Glyma.02G116200 Glycine max
Glyma.20G025700 Glycine max
Gohir.A09G009800 Gossypium hirsutum
Gohir.A12G161400 Gossypium hirsutum
Gohir.D09G008900 Gossypium hirsutum
Gohir.D12G164700 Gossypium hirsutum
Gorai.006G010600 Gossypium raimondii
Gorai.008G177500 Gossypium raimondii
GSVIVG01012213001 Vitis vinifera
GSVIVG01032919001 Vitis vinifera
GSVIVG01032920001 Vitis vinifera
HanXRQChr12g0363061 Helianthus annuus
HanXRQChr12g0375281 Helianthus annuus
HanXRQChr15g0477071 Helianthus annuus
Haze_11914 Corylus avellana
Hma1.2p1_0364F.1_g136670 Hydrangea macrophylla
Hma1.2p1_0481F.1_g162120 Hydrangea macrophylla
Hma1.2p1_1826F.1_g304430 Hydrangea macrophylla
Hma1.2p1_1826F.1_g304433 Hydrangea macrophylla
Hma1.2p1_1826F.1_g304436 Hydrangea macrophylla
HPP92_023633 Vanilla planifolia
Hund05838 Selenicereus undatus
Hund25182 Selenicereus undatus
Hund30463 Selenicereus undatus
Hund30917 Selenicereus undatus
Hund30994 Selenicereus undatus
Lalb_Chr04g0255671 Lupinus albus
Lalb_Chr05g0219951 Lupinus albus
Lalb_Chr05g0219961 Lupinus albus
Lalb_Chr10g0098801 Lupinus albus
Lalb_Chr17g0341181 Lupinus albus
Lalb_Chr17g0341191 Lupinus albus
Lj2g0021856 Lotus japonicus
Lj6A779T69 Lonicera japonica
Lsat_1_v5_gn_3_105761 Lactuca sativa
Lsat_1_v5_gn_3_56380 Lactuca sativa
Lsat_1_v5_gn_8_48041 Lactuca sativa
Manes.01G028200 Manihot esculenta
Manes.01G095700 Manihot esculenta
Mapoly0009s0132 Marchantia polymorpha
MBI16_g05777_MAGBIO Magnolia biondii
MCO10G138 Micromonas commoda
MD09G1066200 Malus domestica
MD13G1063200 Malus domestica
MD17G1058900 Malus domestica
MD17G1059000 Malus domestica
MD17G1059200 Malus domestica
MD17G1059300 Malus domestica
Medtr4g083080 Medicago truncatula
Medtr5g044540 Medicago truncatula
MELO3C011424.2 Cucumis melo
MELO3C022620.2 Cucumis melo
MELO3C028664.2 Cucumis melo
MELO3C034452.2 Cucumis melo
Migut.E00047 Erythranthe guttata
Migut.K01276 Erythranthe guttata
MSTRG.2307 Avicennia marina
MSTRG.2312 Avicennia marina
MSTRG.3355 Avicennia marina
Nitab4.5_0000231g0370 Nicotiana tabacum
Nitab4.5_0004171g0010 Nicotiana tabacum
Nn3g17436 Nelumbo nucifera
Nn4g23418 Nelumbo nucifera
Oeu017533.3 Olea europaea
Oeu022232.1 Olea europaea
Os07g0602100 Oryza sativa ssp. japonica
Peaxi162Scf00175g00016 Petunia axillaris
PGR004G0676 Punica granatum
PGR102G0210 Punica granatum
PGSC0003DMG401028319 Solanum tuberosum
PGSC0003DMG402028319 Solanum tuberosum
Phvul.002G102200 Phaseolus vulgaris
Phvul.003G042900 Phaseolus vulgaris
Potri.004G120000 Populus trichocarpa
Potri.010G158800 Populus trichocarpa
Potri.017G093500 Populus trichocarpa
Pp3c19_14810 Physcomitrium patens
PRCOL_00001608 Prasinoderma coloniale
Prupe.1G286400 Prunus persica
Prupe.3G255300 Prunus persica
Psat2g129520 Pisum sativum
Psat7g133640 Pisum sativum
PSO017G0004 Papaver somniferum
PSO017G4100 Papaver somniferum
PSO017G6994 Papaver somniferum
PSO478G0967 Papaver somniferum
QL01p043811 Quercus lobata
QL02p067683 Quercus lobata
QL02p067695 Quercus lobata
QL03p071875 Quercus lobata
QL03p071987 Quercus lobata
QL03p072025 Quercus lobata
QL03p072049 Quercus lobata
QL03p072340 Quercus lobata
QL03p072372 Quercus lobata
QL03p072395 Quercus lobata
QL03p072417 Quercus lobata
RcHm_v2.0_Chr2g0165891 Rosa chinensis
RcHm_v2.0_Chr4g0438471 Rosa chinensis
Rhsim10G0042700 Rhododendron simsii
Rhsim12G0136000 Rhododendron simsii
Sabra04G0069300 Salix brachista
Sabra10G0120600 Salix brachista
Sabra17G0082400 Salix brachista
SalBow1G1316 Salvia bowleyana
SalBow1G8358 Salvia bowleyana
SalBow8G3191 Salvia bowleyana
Sc04g0007610 Simmondsia chinensis
Sc11g0002410 Simmondsia chinensis
Sed0019194 Sechium edule
Sed0019250 Sechium edule
SEGI_01460 Sequoiadendron giganteum
SEGI_17963 Sequoiadendron giganteum
SEGI_41611 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36403 Striga asiatica
SGA_v2.0_scaffold63G21629 Striga asiatica
SMO364G0611 Selaginella moellendorffii
Solyc05g012350.4 Solanum lycopersicum
Solyc05g012360.3 Solanum lycopersicum
Solyc05g012370.3 Solanum lycopersicum
Sopen05g007180 Solanum pennellii
Sopen05g007190 Solanum pennellii
Sp1g12120 Schrenkiella parvula
Sp7g02760 Schrenkiella parvula
TAR371G0205 Trochodendron aralioides
TAR629G0108 Trochodendron aralioides
TAR629G3004 Trochodendron aralioides
THA.LOC104822884 Tarenaya hassleriana
THA.LOC104824060 Tarenaya hassleriana
Thecc.02G331600 Theobroma cacao
Thecc.02G331900 Theobroma cacao
Thecc.04G095100 Theobroma cacao
Thhalv10008133m.g Eutrema salsugineum
Thhalv10027834m.g Eutrema salsugineum
Thhalv10028024m.g Eutrema salsugineum
TPR.G23720 Trifolium pratense
TPR.G24445 Trifolium pratense
TPR.G26448 Trifolium pratense
TWI31G1102 Tripterygium wilfordii
TWI34G1877 Tripterygium wilfordii
vmacro05631 Vaccinium macrocarpon
vmacro16383 Vaccinium macrocarpon
VMungo0251G3207 Vigna mungo
VMungo1215G1809 Vigna mungo
Zm00001eb108550 Zea mays

User provided reference genes

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