Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22270 Brassica napus
A04p30010 Brassica napus
A05p06330 Brassica napus
Aa31LG3G6410 Aethionema arabicum
Aa31LG6G10180 Aethionema arabicum
Aa31LG6G9550 Aethionema arabicum
Aa31LG6G9560 Aethionema arabicum
Aa31LG7G1510 Aethionema arabicum
Aa31LG7G1520 Aethionema arabicum
Aa31LG7G1530 Aethionema arabicum
Aa31LG7G1540 Aethionema arabicum
Aa31LG7G1550 Aethionema arabicum
Aa31LG7G1570 Aethionema arabicum
Aa31LG7G1580 Aethionema arabicum
Aa31LG7G1590 Aethionema arabicum
Aa31LG7G1600 Aethionema arabicum
Aa31LG8G11380 Aethionema arabicum
Aa31LG8G17140 Aethionema arabicum
Aa31LG8G17150 Aethionema arabicum
Aa31LG8G17160 Aethionema arabicum
Aa31LG8G17170 Aethionema arabicum
Aa31LG8G17180 Aethionema arabicum
Aa31LG8G17190 Aethionema arabicum
Aa31LG8G17200 Aethionema arabicum
Aa31LG8G17210 Aethionema arabicum
Aa31LG8G17220 Aethionema arabicum
Actinidia06978 Actinidia chinensis
Actinidia09441 Actinidia chinensis
Actinidia20408 Actinidia chinensis
Actinidia20409 Actinidia chinensis
Actinidia25669 Actinidia chinensis
Ah.06g194720 Amaranthus hybridus
AL4G37790 Arabidopsis lyrata
AL7G49890 Arabidopsis lyrata
AL8G24310 Arabidopsis lyrata
Aqoxy1G01498 Aquilegia oxysepala
Aqoxy1G01499 Aquilegia oxysepala
Aqoxy2G00438 Aquilegia oxysepala
Aqoxy2G03580 Aquilegia oxysepala
Aqoxy7G01497 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea
AT1G20600 Arabidopsis thaliana
AT4G03160 Arabidopsis thaliana
AT4G03170 Arabidopsis thaliana
ATR0307G041 Amborella trichopoda
Atru.chr3.3004 Acer truncatum
AUR62000212 Chenopodium quinoa
AUR62006558 Chenopodium quinoa
BcaB02g09048 Brassica carinata
BcaB06g29131 Brassica carinata
BcaC01g05431 Brassica carinata
BcaC01g05470 Brassica carinata
BcaC02g07356 Brassica carinata
BcaC02g12127 Brassica carinata
BolC3t15022H Brassica oleracea
BolC3t15059H Brassica oleracea
BolC4t22351H Brassica oleracea
BolC4t22940H Brassica oleracea
BolC4t28286H Brassica oleracea
BraA03t11459Z Brassica rapa
BraA04t18506Z Brassica rapa
BraA05t19601Z Brassica rapa
C03p26370 Brassica napus
C03p26740 Brassica napus
C04p07280 Brassica napus
CAN.G1774.3 Capsicum annuum
CANSAT54G1196 Cannabis sativa
CARHR135110 Cardamine hirsuta
CARHR135120 Cardamine hirsuta
Carub.0003s2754 Capsella rubella
Carub.0004s2232 Capsella rubella
Ca_06190_v3 Cicer arietinum L.
Cfa009897 Carpinus fangiana
Cfa009898 Carpinus fangiana
Cfa016244 Carpinus fangiana
Cfa016245 Carpinus fangiana
Ciclev10007038m.g Citrus clementina
Ciclev10010395m.g Citrus clementina
Ciclev10017459m.g Citrus clementina
CiPaw.03G014700 Carya illinoinensis
CiPaw.03G014800 Carya illinoinensis
CiPaw.03G015000 Carya illinoinensis
CiPaw.03G015100 Carya illinoinensis
CiPaw.03G015300 Carya illinoinensis
CiPaw.13G148700 Carya illinoinensis
ClCG02G022730 Citrullus lanatus
COL.COLO4_00094 Corchorus olitorius
COL.COLO4_02755 Corchorus olitorius
COL.COLO4_32232 Corchorus olitorius
COL.COLO4_34789 Corchorus olitorius
Cpa.g.sc81.85 Carica papaya
CsaV3_3G004840 Cucumis sativus L.
CsaV3_6G038850 Cucumis sativus L.
CSS0001293 Camellia sinensis var. sinensis
DCAR_003268 Daucus carota
DCAR_003269 Daucus carota
DCAR_014131 Daucus carota
DCAR_028226 Daucus carota
DCAR_029984 Daucus carota
Dinv04578 Davidia involucrata
Dinv07991 Davidia involucrata
Dinv07992 Davidia involucrata
Dinv26718 Davidia involucrata
Dinv36151 Davidia involucrata
Dinv41084 Davidia involucrata
Dinv41650 Davidia involucrata
Duzib168G2229 Durio zibethinus
Duzib213G0038 Durio zibethinus
Duzib213G1035 Durio zibethinus
ECA238G3721 Erigeron canadensis
Eucgr.C01014 Eucalyptus grandis
Eucgr.J00677 Eucalyptus grandis
Eucgr.L02178 Eucalyptus grandis
FAN13G0375 Fragaria x ananassa
FAN15G1799 Fragaria x ananassa
FAN18G0094 Fragaria x ananassa
FAN19G0693 Fragaria x ananassa
FAN19G2118 Fragaria x ananassa
FAN20G0750 Fragaria x ananassa
FAN23G1126 Fragaria x ananassa
FAN23G1485 Fragaria x ananassa
FAN23G2696 Fragaria x ananassa
FAN24G3374 Fragaria x ananassa
FAN26G1179 Fragaria x ananassa
FAN27G2498 Fragaria x ananassa
FAN28G2808 Fragaria x ananassa
FvH4_1g16231 Fragaria vesca
FvH4_1g24261 Fragaria vesca
FvH4_2g06740 Fragaria vesca
FvH4_5g06160 Fragaria vesca
Glyma.02G278200 Glycine max
Glyma.04G133200 Glycine max
Glyma.14G036400 Glycine max
Gohir.A06G065650 Gossypium hirsutum
Gohir.A07G121200 Gossypium hirsutum
Gohir.D06G064250 Gossypium hirsutum
Gohir.D07G125500 Gossypium hirsutum
Gorai.001G135300 Gossypium raimondii
Gorai.010G075000 Gossypium raimondii
HanXRQChr03g0090311 Helianthus annuus
Haze_00185 Corylus avellana
Haze_00196 Corylus avellana
Haze_00197 Corylus avellana
Haze_23259 Corylus avellana
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla
HPP92_007504 Vanilla planifolia
HPP92_022826 Vanilla planifolia
Lalb_Chr10g0106141 Lupinus albus
Lj1g0000886 Lotus japonicus
Lj3g0006952 Lotus japonicus
LjContig00564g0023278 Lotus japonicus
Lsat_1_v5_gn_2_32340 Lactuca sativa
Lsat_1_v5_gn_2_32520 Lactuca sativa
Lsat_1_v5_gn_3_109980 Lactuca sativa
Manes.02G136900 Manihot esculenta
Manes.03G176000 Manihot esculenta
Manes.03G176200 Manihot esculenta
Manes.05G200100 Manihot esculenta
MBI13_g09212_MAGBIO Magnolia biondii
MD00G1045800 Malus domestica
MD00G1107900 Malus domestica
MD02G1059300 Malus domestica
MD02G1060300 Malus domestica
MD03G1164300 Malus domestica
MD15G1316300 Malus domestica
Medtr0267s0030 Medicago truncatula
Medtr3g013810 Medicago truncatula
Medtr3g013820 Medicago truncatula
Medtr3g013900 Medicago truncatula
Medtr3g013920 Medicago truncatula
Medtr5g089100 Medicago truncatula
MELO3C004101.2 Cucumis melo
MELO3C014550.2 Cucumis melo
Migut.D00675 Erythranthe guttata
MSTRG.18469 Avicennia marina
Nitab4.5_0000316g0140 Nicotiana tabacum
Nitab4.5_0001004g0110 Nicotiana tabacum
Nitab4.5_0001888g0040 Nicotiana tabacum
Nitab4.5_0005564g0030 Nicotiana tabacum
Oeu025912.1 Olea europaea
Peaxi162Scf00023g00136 Petunia axillaris
Peaxi162Scf00665g00126 Petunia axillaris
Peaxi162Scf00665g00139 Petunia axillaris
Peaxi162Scf00665g00148 Petunia axillaris
PGR102G0853 Punica granatum
PGR119G1676 Punica granatum
PGSC0003DMG400000368 Solanum tuberosum
PGSC0003DMG400000370 Solanum tuberosum
PGSC0003DMG400000371 Solanum tuberosum
Phvul.005G028900 Phaseolus vulgaris
Phvul.005G031300 Phaseolus vulgaris
Phvul.008G165900 Phaseolus vulgaris
Phvul.008G202700 Phaseolus vulgaris
Potri.001G274000 Populus trichocarpa
Potri.001G397100 Populus trichocarpa
Potri.009G068200 Populus trichocarpa
Prupe.4G260600 Prunus persica
Prupe.7G162100 Prunus persica
Prupe.7G223800 Prunus persica
Prupe.7G223900 Prunus persica
Prupe.7G224000 Prunus persica
Prupe.7G224100 Prunus persica
Psat0s1289g0080 Pisum sativum
PSO566G0305 Papaver somniferum
PSO782G1409 Papaver somniferum
QL01p016685 Quercus lobata
QL01p018928 Quercus lobata
QL01p018935 Quercus lobata
QL01p018939 Quercus lobata
QL02p042555 Quercus lobata
QL02p042807 Quercus lobata
RcHm_v2.0_Chr2g0120751 Rosa chinensis
RcHm_v2.0_Chr6g0258931 Rosa chinensis
RcHm_v2.0_Chr7g0192641 Rosa chinensis
Rhsim05G0042200 Rhododendron simsii
Rhsim13G0206300 Rhododendron simsii
Sabra08G0161200 Salix brachista
Sabra09G0051300 Salix brachista
Sabra16G0168800 Salix brachista
Sabra16G0260100 Salix brachista
Sc16g0010940 Simmondsia chinensis
Sed0017653 Sechium edule
Sed0022151 Sechium edule
Sed0027145 Sechium edule
Sed0027264 Sechium edule
SGA_v2.0_scaffold29G12225 Striga asiatica
Solyc12g007300.1 Solanum lycopersicum
Sopen12g003260 Solanum pennellii
Sp4g22050 Schrenkiella parvula
Sp4g22450 Schrenkiella parvula
Sp5g18240 Schrenkiella parvula
TAR369G1143 Trochodendron aralioides
TAR633G0275 Trochodendron aralioides
THA.LOC104810048 Tarenaya hassleriana
Thecc.07G171000 Theobroma cacao
Thecc.09G104200 Theobroma cacao
Thecc.09G246300 Theobroma cacao
Thhalv10003384m.g Eutrema salsugineum
Thhalv10017517m.g Eutrema salsugineum
TPR.G12039 Trifolium pratense
TPR.G1395 Trifolium pratense
TPR.G1412 Trifolium pratense
TPR.G1447 Trifolium pratense
TPR.G16419 Trifolium pratense
TPR.G22027 Trifolium pratense
TPR.G8024 Trifolium pratense
TWI79G0642 Tripterygium wilfordii
VMungo0647G1446 Vigna mungo
VMungo1080G0152 Vigna mungo
VMungo1080G0686 Vigna mungo

User provided reference genes

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