Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08440 Brassica napus
A01p08450 Brassica napus
A01p08460 Brassica napus
A03p59010 Brassica napus
A08p19570 Brassica napus
A08p19580 Brassica napus
Aa31LG2G20860 Aethionema arabicum
Aa31LG2G20870 Aethionema arabicum
Aa31LG2G20880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4938 Anthoceros agrestis
Actinidia12692 Actinidia chinensis
Actinidia25257 Actinidia chinensis
Ah.09g228360 Amaranthus hybridus
Ah.14g085230 Amaranthus hybridus
AL7G22600 Arabidopsis lyrata
AL7G22610 Arabidopsis lyrata
AL7G22620 Arabidopsis lyrata
AL7G22630 Arabidopsis lyrata
Aqoxy7G01234 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.27FEJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7JP0M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YYF952 Arachis hypogaea
AT4G29680 Arabidopsis thaliana
AT4G29690 Arabidopsis thaliana
AT4G29700 Arabidopsis thaliana
AT4G29710 Arabidopsis thaliana
ATR0026G060 Amborella trichopoda
Atru.chr7.1577 Acer truncatum
AUR62027493 Chenopodium quinoa
AUR62033988 Chenopodium quinoa
BcaB03g12613 Brassica carinata
BcaB03g12614 Brassica carinata
BcaC01g01178 Brassica carinata
BcaC01g01179 Brassica carinata
BcaC01g01180 Brassica carinata
BcaC09g51746 Brassica carinata
BcaC09g51747 Brassica carinata
BcaC09g51748 Brassica carinata
BcaC09g52210 Brassica carinata
BcaC09g52219 Brassica carinata
BcaC09g52220 Brassica carinata
BcaNung00483 Brassica carinata
BolC1t00938H Brassica oleracea
BolC1t00939H Brassica oleracea
BolC1t00946H Brassica oleracea
BolC3t21229H Brassica oleracea
BolC3t21230H Brassica oleracea
BolC7t46175H Brassica oleracea
BraA01t00791Z Brassica rapa
BraA01t00792Z Brassica rapa
BraA01t00793Z Brassica rapa
BraA03t14961Z Brassica rapa
BraA08t33916Z Brassica rapa
BraA08t33917Z Brassica rapa
C01p09760 Brassica napus
C01p09770 Brassica napus
C01p09840 Brassica napus
C03p89170 Brassica napus
C03p89190 Brassica napus
C03p89200 Brassica napus
C03p89210 Brassica napus
C07p57050 Brassica napus
CAN.G491.4 Capsicum annuum
CANSAT56G1627 Cannabis sativa
CANSAT56G4319 Cannabis sativa
CARHR237530 Cardamine hirsuta
CARHR237540 Cardamine hirsuta
CARHR237550 Cardamine hirsuta
CARHR237560 Cardamine hirsuta
Carub.0007s1081 Capsella rubella
Carub.0007s1082 Capsella rubella
Carub.0007s1084 Capsella rubella
Carub.0008s0768 Capsella rubella
Ca_17406_v3 Cicer arietinum L.
Ca_25625_v3 Cicer arietinum L.
CBR_g27979 Chara braunii
CBR_g3480 Chara braunii
Cc06_g11320 Coffea canephora
CDE07G0363 Ceratophyllum demersum
Cfa003095 Carpinus fangiana
Cfa024105 Carpinus fangiana
Ciclev10001130m.g Citrus clementina
Ciclev10008105m.g Citrus clementina
CiPaw.03G217100 Carya illinoinensis
ClCG11G001800 Citrullus lanatus
COL.COLO4_18210 Corchorus olitorius
Cpa.g.sc93.23 Carica papaya
CsaV3_2G001510 Cucumis sativus L.
CSS0001795 Camellia sinensis var. sinensis
CSS0032365 Camellia sinensis var. sinensis
CSS0041033 Camellia sinensis var. sinensis
CSS0042793 Camellia sinensis var. sinensis
DCAR_004380 Daucus carota
DCAR_011979 Daucus carota
DCAR_011980 Daucus carota
DCAR_011981 Daucus carota
DCAR_011982 Daucus carota
DCAR_013366 Daucus carota
Dinv36759 Davidia involucrata
Dinv42314 Davidia involucrata
Duzib150G1348 Durio zibethinus
Duzib168G1537 Durio zibethinus
Duzib187G0697 Durio zibethinus
ECA240G1423 Erigeron canadensis
ECA240G2943 Erigeron canadensis
EL10Ac8g19232 Beta vulgaris
Eucgr.C03891 Eucalyptus grandis
FAN19G0345 Fragaria x ananassa
FAN23G1787 Fragaria x ananassa
FAN26G0453 Fragaria x ananassa
FAN26G2612 Fragaria x ananassa
FAN28G0735 Fragaria x ananassa
FvH4_1g07280 Fragaria vesca
Glyma.01G002600 Glycine max
Glyma.05G222200 Glycine max
Glyma.07G129700 Glycine max
Glyma.08G028900 Glycine max
Gohir.A05G029700 Gossypium hirsutum
Gohir.A06G072100 Gossypium hirsutum
Gohir.D05G031100 Gossypium hirsutum
Gohir.D06G070600 Gossypium hirsutum
Gorai.009G031300 Gossypium raimondii
Gorai.010G082300 Gossypium raimondii
GSVIVG01015213001 Vitis vinifera
HanXRQChr03g0060421 Helianthus annuus
Haze_25903 Corylus avellana
Hma1.2p1_0798F.1_g219770 Hydrangea macrophylla
Hma1.2p1_0800F.1_g220080 Hydrangea macrophylla
HPP92_003970 Vanilla planifolia
HPP92_006467 Vanilla planifolia
Lalb_Chr05g0223661 Lupinus albus
Lalb_Chr14g0375361 Lupinus albus
Lj2g0010514 Lotus japonicus
Lj2g0017054 Lotus japonicus
Lj2g0019934 Lotus japonicus
Lj4A307G51 Lonicera japonica
Lj4g0006156 Lotus japonicus
Lj7P674T34 Lonicera japonica
Lsat_1_v5_gn_5_85400 Lactuca sativa
Lsat_1_v5_gn_7_37360 Lactuca sativa
Lsat_1_v5_gn_7_37400 Lactuca sativa
Lsat_1_v5_gn_7_37420 Lactuca sativa
Lsat_1_v5_gn_8_71560 Lactuca sativa
Manes.03G033000 Manihot esculenta
Manes.16G102800 Manihot esculenta
Mapoly0040s0009 Marchantia polymorpha
Mapoly0071s0108 Marchantia polymorpha
MBI01_g09955_MAGBIO Magnolia biondii
MCO13G054 Micromonas commoda
MD02G1077600 Malus domestica
MD15G1206200 Malus domestica
Medtr1g007440 Medicago truncatula
Medtr6g092720 Medicago truncatula
Medtr8g101560 Medicago truncatula
MELO3C004621.2 Cucumis melo
Migut.H01157 Erythranthe guttata
Migut.H01160 Erythranthe guttata
Migut.H01161 Erythranthe guttata
Migut.J00601 Erythranthe guttata
Migut.J00602 Erythranthe guttata
Migut.J00611 Erythranthe guttata
Migut.L01487 Erythranthe guttata
MSTRG.6054 Avicennia marina
Nitab4.5_0005634g0010 Nicotiana tabacum
Nitab4.5_0005634g0060 Nicotiana tabacum
Nitab4.5_0014305g0010 Nicotiana tabacum
Nitab4.5_0014305g0040 Nicotiana tabacum
Nn6g35449 Nelumbo nucifera
Nn8g38890 Nelumbo nucifera
Oeu018236.1 Olea europaea
Oeu018427.1 Olea europaea
Oeu034040.1 Olea europaea
Os01g0196600 Oryza sativa ssp. japonica
Peaxi162Scf00496g00061 Petunia axillaris
PGR102G0314 Punica granatum
PGR102G3342 Punica granatum
PGSC0003DMG400030123 Solanum tuberosum
PGSC0003DMG400030124 Solanum tuberosum
Phvul.002G303900 Phaseolus vulgaris
Phvul.004G176900 Phaseolus vulgaris
Potri.006G150900 Populus trichocarpa
Potri.018G066600 Populus trichocarpa
Pp3c11_25540 Physcomitrium patens
Pp3c7_1990 Physcomitrium patens
Pp3c8_13050 Physcomitrium patens
Pp3s30_290 Physcomitrium patens
Prupe.7G211200 Prunus persica
Psat1g050840 Pisum sativum
Psat7g020280 Pisum sativum
PSO063G2084 Papaver somniferum
PSO210G3465 Papaver somniferum
PSO210G4137 Papaver somniferum
PSO832G2647 Papaver somniferum
QL02p062838 Quercus lobata
RcHm_v2.0_Chr2g0093191 Rosa chinensis
RcHm_v2.0_Chr2g0093211 Rosa chinensis
Rhsim05G0022100 Rhododendron simsii
Sabra06G0119500 Salix brachista
Sabra18G0059000 Salix brachista
SabraUnG0005400 Salix brachista
SalBow1G4267 Salvia bowleyana
SalBow6G6967 Salvia bowleyana
Sc18g0002080 Simmondsia chinensis
Sed0027760 Sechium edule
SEGI_11141 Sequoiadendron giganteum
SEGI_36715 Sequoiadendron giganteum
SEGI_38404 Sequoiadendron giganteum
SEGI_39987 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09361 Striga asiatica
SGA_v2.0_scaffold62G21602 Striga asiatica
SMO145G0063 Selaginella moellendorffii
SMO145G0103 Selaginella moellendorffii
SMO145G0131 Selaginella moellendorffii
SMO145G0219 Selaginella moellendorffii
SMO145G0255 Selaginella moellendorffii
SMO157G0001 Selaginella moellendorffii
SMO203G0095 Selaginella moellendorffii
SMO203G0116 Selaginella moellendorffii
Solyc07g037950.1 Solanum lycopersicum
Solyc07g037960.1 Solanum lycopersicum
Sopen07g017310 Solanum pennellii
Sopen07g017320 Solanum pennellii
Sp3g22800 Schrenkiella parvula
Sp7g27470 Schrenkiella parvula
Sp7g27480 Schrenkiella parvula
TAR624G0639 Trochodendron aralioides
THA.LOC104814614 Tarenaya hassleriana
Thecc.09G090400 Theobroma cacao
Thhalv10024984m.g Eutrema salsugineum
Thhalv10025136m.g Eutrema salsugineum
Thhalv10027375m.g Eutrema salsugineum
TPR.G21351 Trifolium pratense
TPR.G23226 Trifolium pratense
TPR.G35486 Trifolium pratense
TPR.G39635 Trifolium pratense
TWI32G0466 Tripterygium wilfordii
TWI34G0532 Tripterygium wilfordii
unitig_27.g24724 Utricularia gibba
unitig_27.g24725 Utricularia gibba
unitig_27.g25366 Utricularia gibba
unitig_27.g25367 Utricularia gibba
unitig_28.g29446 Utricularia gibba
unitig_8.g4693 Utricularia gibba
vmacro17225 Vaccinium macrocarpon
vmacro17226 Vaccinium macrocarpon
VMungo0251G3094 Vigna mungo
VMungo0464G0628 Vigna mungo
Zm00001eb120900 Zea mays
Zm00001eb160570 Zea mays
Zm00001eb160580 Zea mays
Zm00001eb177950 Zea mays
Zm00001eb177960 Zea mays
Zm00001eb398910 Zea mays
Zm00001eb398920 Zea mays

User provided reference genes

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