Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21560 Brassica napus
A04p29560 Brassica napus
Aa31LG5G20960 Aethionema arabicum
Actinidia03394 Actinidia chinensis
Actinidia03395 Actinidia chinensis
Actinidia25940 Actinidia chinensis
Actinidia30959 Actinidia chinensis
AL1G25760 Arabidopsis lyrata
AL4G26360 Arabidopsis lyrata
AL4G36040 Arabidopsis lyrata
Aqoxy3G02540 Aquilegia oxysepala
Aqoxy7G00871 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51QFY3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.83AB0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A3E2K1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQ6T7Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ID9R81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB3F3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KDR3EC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTK8DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9T80E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXHT09 Arachis hypogaea
AT2G38740 Arabidopsis thaliana
ATR0665G287 Amborella trichopoda
Atru.chr6.1782 Acer truncatum
AUR62007219 Chenopodium quinoa
AUR62018782 Chenopodium quinoa
BcaC02g07449 Brassica carinata
BolC3t14943H Brassica oleracea
BolC4t28187H Brassica oleracea
BraA03t11392Z Brassica rapa
BraA04t18421Z Brassica rapa
C03p25560 Brassica napus
C04p66850 Brassica napus
CAN.G572.40 Capsicum annuum
CAN.G845.28 Capsicum annuum
CANSAT21G0275 Cannabis sativa
CANSAT21G2609 Cannabis sativa
CANSAT25G1621 Cannabis sativa
CARHR133430 Cardamine hirsuta
Carub.0004s2074 Capsella rubella
Ca_24629_v3 Cicer arietinum L.
CBR_g30623 Chara braunii
Cc02_g25730 Coffea canephora
Cc02_g25740 Coffea canephora
Cc08_g01800 Coffea canephora
CDE02G0081 Ceratophyllum demersum
CDE11G1170 Ceratophyllum demersum
Cfa012377 Carpinus fangiana
Cfa014515 Carpinus fangiana
Cfa022161 Carpinus fangiana
Cfa022873 Carpinus fangiana
Ciclev10032556m.g Citrus clementina
CiPaw.11G087200 Carya illinoinensis
CiPaw.12G059900 Carya illinoinensis
CiPaw.14G015400 Carya illinoinensis
ClCG06G000790 Citrullus lanatus
ClCG10G001930 Citrullus lanatus
COL.COLO4_17119 Corchorus olitorius
Cpa.g.sc52.63 Carica papaya
Cpa.g.sc74.91 Carica papaya
Cre17.g711200 Chlamydomonas reinhardtii
CsaV3_3G002060 Cucumis sativus L.
CsaV3_3G002070 Cucumis sativus L.
CsaV3_6G006590 Cucumis sativus L.
CSS0029983 Camellia sinensis var. sinensis
CSS0030091 Camellia sinensis var. sinensis
CSS0030416 Camellia sinensis var. sinensis
DCAR_005599 Daucus carota
DCAR_008302 Daucus carota
DCAR_025020 Daucus carota
Dinv25180 Davidia involucrata
Dinv28910 Davidia involucrata
Dinv44011 Davidia involucrata
Duzib084G0668 Durio zibethinus
Duzib205G1227 Durio zibethinus
ECA234G1769 Erigeron canadensis
ECA240G2471 Erigeron canadensis
EL10As14g24075 Beta vulgaris
Eucgr.D01168 Eucalyptus grandis
Eucgr.D02149 Eucalyptus grandis
Eucgr.D02150 Eucalyptus grandis
Eucgr.D02152 Eucalyptus grandis
FAN04G0853 Fragaria x ananassa
FAN08G0548 Fragaria x ananassa
FAN10G1860 Fragaria x ananassa
FAN10G3486 Fragaria x ananassa
FAN13G1291 Fragaria x ananassa
FAN13G1899 Fragaria x ananassa
FAN18G4154 Fragaria x ananassa
FvH4_5g21050 Fragaria vesca
Glyma.01G202000 Glycine max
Glyma.11G040800 Glycine max
Glyma.11G040900 Glycine max
Gohir.A08G160000 Gossypium hirsutum
Gohir.A12G211200 Gossypium hirsutum
Gohir.D08G180400 Gossypium hirsutum
Gohir.D12G213800 Gossypium hirsutum
Gorai.004G188900 Gossypium raimondii
Gorai.004G189000 Gossypium raimondii
Gorai.008G229400 Gossypium raimondii
GSVIVG01013216001 Vitis vinifera
GSVIVG01013217001 Vitis vinifera
GSVIVG01018381001 Vitis vinifera
HanXRQChr03g0085751 Helianthus annuus
HanXRQChr03g0085771 Helianthus annuus
HanXRQChr03g0085791 Helianthus annuus
HanXRQChr03g0085821 Helianthus annuus
HanXRQChr13g0416681 Helianthus annuus
HanXRQChr14g0457351 Helianthus annuus
HanXRQChr16g0521521 Helianthus annuus
Haze_02914 Corylus avellana
Haze_08307 Corylus avellana
Haze_08310 Corylus avellana
Hma1.2p1_0311F.1_g121240 Hydrangea macrophylla
HPP92_014654 Vanilla planifolia
Hund14434 Selenicereus undatus
Lalb_Chr09g0323951 Lupinus albus
Lalb_Chr16g0379241 Lupinus albus
Lj2A247T88 Lonicera japonica
Lj2g0022865 Lotus japonicus
Lj2g0024314 Lotus japonicus
Lj8A289T63 Lonicera japonica
Lj8A289T64 Lonicera japonica
Lj8A342G8 Lonicera japonica
Lj8A349T5 Lonicera japonica
Lj8C348G2 Lonicera japonica
Lj9A549T50 Lonicera japonica
Lsat_1_v5_gn_4_38661 Lactuca sativa
Lsat_1_v5_gn_6_88261 Lactuca sativa
Manes.15G172100 Manihot esculenta
Manes.17G017900 Manihot esculenta
Mapoly0002s0221 Marchantia polymorpha
Mapoly0004s0254 Marchantia polymorpha
Mapoly0050s0072 Marchantia polymorpha
Mapoly0156s0002 Marchantia polymorpha
MBI04_g03329_MAGBIO Magnolia biondii
MBI04_g08843_MAGBIO Magnolia biondii
MBI04_g46808_MAGBIO Magnolia biondii
MCO04G121 Micromonas commoda
MD00G1123300 Malus domestica
MD00G1123600 Malus domestica
MD00G1190500 Malus domestica
MD02G1226100 Malus domestica
MD02G1226200 Malus domestica
MD02G1226400 Malus domestica
MD06G1041200 Malus domestica
MD07G1087800 Malus domestica
MD12G1227700 Malus domestica
MD15G1033000 Malus domestica
Medtr1280s0010 Medicago truncatula
Medtr5g013910 Medicago truncatula
MELO3C013877.2 Cucumis melo
MELO3C013878.2 Cucumis melo
MELO3C022462.2 Cucumis melo
Migut.B01477 Erythranthe guttata
Migut.E00803 Erythranthe guttata
Migut.E00905 Erythranthe guttata
MSTRG.13763 Avicennia marina
Nitab4.5_0002055g0050 Nicotiana tabacum
Nitab4.5_0003616g0020 Nicotiana tabacum
Nitab4.5_0004913g0010 Nicotiana tabacum
Nitab4.5_0005487g0020 Nicotiana tabacum
Nitab4.5_0009567g0030 Nicotiana tabacum
Nitab4.5_0010461g0010 Nicotiana tabacum
Nn1g00631 Nelumbo nucifera
Nn6g33677 Nelumbo nucifera
Oeu024384.1 Olea europaea
Oeu028028.1 Olea europaea
Oeu053050.1 Olea europaea
Oeu053052.1 Olea europaea
Os06g0109500 Oryza sativa ssp. japonica
Os09g0407700 Oryza sativa ssp. japonica
Os10g0568900 Oryza sativa ssp. japonica
Peaxi162Scf00075g01627 Petunia axillaris
Peaxi162Scf00084g00717 Petunia axillaris
Peaxi162Scf00088g00146 Petunia axillaris
Peaxi162Scf00102g00720 Petunia axillaris
Peaxi162Scf00102g00721 Petunia axillaris
Peaxi162Scf00684g00577 Petunia axillaris
PGR031G3668 Punica granatum
PGR031G3791 Punica granatum
PGSC0003DMG400001865 Solanum tuberosum
PGSC0003DMG400005810 Solanum tuberosum
PGSC0003DMG400020512 Solanum tuberosum
Phvul.002G004200 Phaseolus vulgaris
Phvul.002G004300 Phaseolus vulgaris
Potri.001G147300 Populus trichocarpa
Potri.001G147400 Populus trichocarpa
Potri.002G135000 Populus trichocarpa
Potri.003G086900 Populus trichocarpa
Potri.014G043500 Populus trichocarpa
Pp3c18_6070 Physcomitrium patens
Pp3c4_20960 Physcomitrium patens
PRCOL_00003914 Prasinoderma coloniale
Prupe.2G111900 Prunus persica
Prupe.2G114400 Prunus persica
Prupe.5G047500 Prunus persica
Prupe.5G047600 Prunus persica
Psat2g174880 Pisum sativum
PSO063G2569 Papaver somniferum
PSO782G0608 Papaver somniferum
QL04p024681 Quercus lobata
QL04p024685 Quercus lobata
QL04p025883 Quercus lobata
QL12p007274 Quercus lobata
RcHm_v2.0_Chr1g0343701 Rosa chinensis
RcHm_v2.0_Chr1g0343751 Rosa chinensis
RcHm_v2.0_Chr1g0343761 Rosa chinensis
RcHm_v2.0_Chr1g0343881 Rosa chinensis
RcHm_v2.0_Chr1g0360261 Rosa chinensis
RcHm_v2.0_Chr7g0208111 Rosa chinensis
Rhsim07G0039800 Rhododendron simsii
Rhsim11G0010500 Rhododendron simsii
Rhsim11G0010800 Rhododendron simsii
Sabra01G0115800 Salix brachista
Sabra01G0117100 Salix brachista
Sabra03G0056600 Salix brachista
Sabra14G0031500 Salix brachista
Sc22g0001350 Simmondsia chinensis
Sed0009584 Sechium edule
Sed0018988 Sechium edule
SEGI_28827 Sequoiadendron giganteum
SEGI_28859 Sequoiadendron giganteum
SEGI_35604 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18225 Striga asiatica
SMO119G0255 Selaginella moellendorffii
Solyc08g007100.4 Solanum lycopersicum
Solyc08g013840.3 Solanum lycopersicum
Solyc08g077350.3 Solanum lycopersicum
Sopen08g003050 Solanum pennellii
Sopen08g004690 Solanum pennellii
Sopen08g025930 Solanum pennellii
Sp4g21100 Schrenkiella parvula
TAR629G3177 Trochodendron aralioides
TAR636G1453 Trochodendron aralioides
THA.LOC104824193 Tarenaya hassleriana
Thecc.03G235000 Theobroma cacao
Thhalv10017141m.g Eutrema salsugineum
TPR.G22717 Trifolium pratense
TWI14G0647 Tripterygium wilfordii
TWI60G0624 Tripterygium wilfordii
TWI60G1704 Tripterygium wilfordii
unitig_21.g20539 Utricularia gibba
vmacro00354 Vaccinium macrocarpon
vmacro00356 Vaccinium macrocarpon
vmacro13536 Vaccinium macrocarpon
VMungo0331G1195 Vigna mungo
VMungo0331G1549 Vigna mungo
VMungo1215G1488 Vigna mungo
VMungo1215G3271 Vigna mungo
VMungo1309G0069 Vigna mungo
VMungo1309G2050 Vigna mungo
Zm00001eb024180 Zea mays
Zm00001eb379130 Zea mays
Zm00001eb379140 Zea mays

User provided reference genes

Program Settings