Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p33050 Brassica napus
Aa31LG1G2670 Aethionema arabicum
Aa31LG7G9970 Aethionema arabicum
Actinidia08046 Actinidia chinensis
Actinidia25109 Actinidia chinensis
Actinidia26861 Actinidia chinensis
Actinidia30618 Actinidia chinensis
Actinidia30619 Actinidia chinensis
Ah.02g131020 Amaranthus hybridus
Ah.09g234250 Amaranthus hybridus
AL1G23310 Arabidopsis lyrata
Aqoxy1G04102 Aquilegia oxysepala
Aqoxy3G01651 Aquilegia oxysepala
Aqoxy3G01654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JG1SZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D7MIWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G65IU1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J75SJQ Arachis hypogaea
AT1G12060 Arabidopsis thaliana
ATR0582G338 Amborella trichopoda
ATR1101G100 Amborella trichopoda
Atru.chr1.2459 Acer truncatum
Atru.chr11.2379 Acer truncatum
Atru.chr3.3710 Acer truncatum
AUR62005663 Chenopodium quinoa
AUR62021868 Chenopodium quinoa
AUR62028890 Chenopodium quinoa
BcaC02g07554 Brassica carinata
BcaC07g41055 Brassica carinata
BcaC07g41059 Brassica carinata
BolC8t49146H Brassica oleracea
BraA08t35225Z Brassica rapa
C08p15160 Brassica napus
C08p40580 Brassica napus
CAN.G103.4 Capsicum annuum
CAN.G307.30 Capsicum annuum
CAN.G65.93 Capsicum annuum
CANSAT01G2764 Cannabis sativa
CANSAT56G3281 Cannabis sativa
CARHR012420 Cardamine hirsuta
Carub.0001s1174 Capsella rubella
Ca_00720_v3 Cicer arietinum L.
Ca_07143_v3 Cicer arietinum L.
Ca_07157_v3 Cicer arietinum L.
Cc09_g00900 Coffea canephora
Cc09_g08480 Coffea canephora
CDE02G1656 Ceratophyllum demersum
CDE02G4607 Ceratophyllum demersum
CDE05G0851 Ceratophyllum demersum
CDE05G2469 Ceratophyllum demersum
CDE05G2679 Ceratophyllum demersum
Cfa000108 Carpinus fangiana
Cfa009398 Carpinus fangiana
Ciclev10018181m.g Citrus clementina
Ciclev10031823m.g Citrus clementina
CiPaw.05G105900 Carya illinoinensis
CiPaw.09G102100 Carya illinoinensis
ClCG01G010270 Citrullus lanatus
ClCG07G015360 Citrullus lanatus
COL.COLO4_24722 Corchorus olitorius
COL.COLO4_35705 Corchorus olitorius
Cpa.g.sc75.118 Carica papaya
Cpa.g.sc96.31 Carica papaya
CsaV3_1G017210 Cucumis sativus L.
CsaV3_4G002950 Cucumis sativus L.
CSS0012165 Camellia sinensis var. sinensis
CSS0035629 Camellia sinensis var. sinensis
DCAR_004886 Daucus carota
DCAR_024650 Daucus carota
Dinv07400 Davidia involucrata
Dinv11706 Davidia involucrata
Duzib052G0088 Durio zibethinus
Duzib052G1163 Durio zibethinus
Duzib235G0187 Durio zibethinus
ECA234G0665 Erigeron canadensis
ECA240G3355 Erigeron canadensis
EL10Ac6g13549 Beta vulgaris
Eucgr.D01395 Eucalyptus grandis
Eucgr.L00542 Eucalyptus grandis
FAN12G0439 Fragaria x ananassa
FAN17G2673 Fragaria x ananassa
FvH4_3g01021 Fragaria vesca
FvH4_4g23260 Fragaria vesca
Glyma.02G096400 Glycine max
Glyma.09G010100 Glycine max
Glyma.15G114400 Glycine max
Glyma.18G284900 Glycine max
Glyma.18G285100 Glycine max
Gohir.A02G017001 Gossypium hirsutum
Gohir.A03G150100 Gossypium hirsutum
Gohir.A03G150201 Gossypium hirsutum
Gohir.A06G205701 Gossypium hirsutum
Gohir.A11G047550 Gossypium hirsutum
Gohir.D02G173100 Gossypium hirsutum
Gohir.D02G188750 Gossypium hirsutum
Gohir.D02G206812 Gossypium hirsutum
Gohir.D05G023300 Gossypium hirsutum
Gohir.D06G215950 Gossypium hirsutum
Gohir.D07G038050 Gossypium hirsutum
Gohir.D08G238942 Gossypium hirsutum
Gohir.D10G237708 Gossypium hirsutum
Gorai.001G075700 Gossypium raimondii
Gorai.005G194700 Gossypium raimondii
Gorai.005G194800 Gossypium raimondii
Gorai.008G034400 Gossypium raimondii
Gorai.009G431000 Gossypium raimondii
Gorai.010G250200 Gossypium raimondii
GSVIVG01000923001 Vitis vinifera
HanXRQChr12g0362251 Helianthus annuus
HanXRQChr14g0451041 Helianthus annuus
HanXRQChr14g0451421 Helianthus annuus
HanXRQChr16g0516641 Helianthus annuus
Haze_06918 Corylus avellana
Haze_06923 Corylus avellana
Haze_12458 Corylus avellana
Hma1.2p1_0700F.1_g205790 Hydrangea macrophylla
HPP92_006390 Vanilla planifolia
HPP92_022804 Vanilla planifolia
Lalb_Chr10g0092001 Lupinus albus
Lj1C600G7 Lonicera japonica
Lj1C600T10 Lonicera japonica
Lj1C600T9 Lonicera japonica
Lj1g0010375 Lotus japonicus
Lj2P1097T8 Lonicera japonica
Lj6g0003651 Lotus japonicus
Lsat_1_v5_gn_4_2061 Lactuca sativa
Lsat_1_v5_gn_4_62441 Lactuca sativa
Manes.10G111700 Manihot esculenta
Manes.13G007700 Manihot esculenta
MBI07_g36513_MAGBIO Magnolia biondii
MBI16_g41625_MAGBIO Magnolia biondii
MD07G1178100 Malus domestica
MD09G1110100 Malus domestica
MD10G1331200 Malus domestica
MD13G1123300 Malus domestica
MD14G1100700 Malus domestica
MD16G1124100 Malus domestica
MD17G1165100 Malus domestica
MD17G1215100 Malus domestica
Medtr2g025690 Medicago truncatula
Medtr7g022490 Medicago truncatula
Medtr7g022790 Medicago truncatula
MELO3C017749.2 Cucumis melo
MELO3C021680.2 Cucumis melo
Migut.K01013 Erythranthe guttata
Migut.M01392 Erythranthe guttata
MSTRG.15538 Avicennia marina
MSTRG.16026 Avicennia marina
Nitab4.5_0000337g0100 Nicotiana tabacum
Nitab4.5_0001109g0010 Nicotiana tabacum
Nitab4.5_0003251g0040 Nicotiana tabacum
Nitab4.5_0003401g0080 Nicotiana tabacum
Nitab4.5_0003401g0090 Nicotiana tabacum
Nitab4.5_0003785g0010 Nicotiana tabacum
Nitab4.5_0004556g0030 Nicotiana tabacum
Nn1g07360 Nelumbo nucifera
Nn3g18831 Nelumbo nucifera
Nn4g26113 Nelumbo nucifera
Nn5g27201 Nelumbo nucifera
Nn7g37581 Nelumbo nucifera
Nn8g41102 Nelumbo nucifera
Nn8g41103 Nelumbo nucifera
Oeu001318.1 Olea europaea
Oeu002766.1 Olea europaea
Oeu058906.1 Olea europaea
Os02g0719700 Oryza sativa ssp. japonica
Peaxi162Scf00128g00166 Petunia axillaris
Peaxi162Scf00442g00043 Petunia axillaris
PGR004G1286 Punica granatum
PGR119G2530 Punica granatum
PGSC0003DMG400010462 Solanum tuberosum
PGSC0003DMG400023607 Solanum tuberosum
PGSC0003DMG400041029 Solanum tuberosum
Phvul.006G143400 Phaseolus vulgaris
Phvul.008G016500 Phaseolus vulgaris
Phvul.008G016600 Phaseolus vulgaris
Potri.003G167500 Populus trichocarpa
Potri.016G014900 Populus trichocarpa
Prupe.1G221500 Prunus persica
Prupe.4G011000 Prunus persica
Psat1g176480 Pisum sativum
Psat3g186080 Pisum sativum
Psat3g186800 Pisum sativum
Psat3g186840 Pisum sativum
Psat3g186880 Pisum sativum
PSO017G3972 Papaver somniferum
PSO210G1645 Papaver somniferum
PSO210G2053 Papaver somniferum
PSO302G0162 Papaver somniferum
PSO478G3563 Papaver somniferum
PSO764G0142 Papaver somniferum
QL03p029584 Quercus lobata
QL03p051288 Quercus lobata
QL05p033962 Quercus lobata
QL05p069750 Quercus lobata
QL05p082393 Quercus lobata
QL08p034740 Quercus lobata
RcHm_v2.0_Chr4g0386881 Rosa chinensis
RcHm_v2.0_Chr4g0429621 Rosa chinensis
RcHm_v2.0_Chr5g0001561 Rosa chinensis
RcHm_v2.0_Chr6g0263021 Rosa chinensis
RcHm_v2.0_Chr6g0277501 Rosa chinensis
RcHm_v2.0_Chr7g0203061 Rosa chinensis
Rhsim13G0146100 Rhododendron simsii
RhsimUnG0109500 Rhododendron simsii
Sabra03G0122800 Salix brachista
Sabra16G0017000 Salix brachista
SalBow2G0376 Salvia bowleyana
SalBow2G0840 Salvia bowleyana
SalBow3G0240 Salvia bowleyana
SalBow8G4541 Salvia bowleyana
Sc14g0009180 Simmondsia chinensis
Sed0004040 Sechium edule
Sed0007957 Sechium edule
Sed0015254 Sechium edule
SGA_v2.0_scaffold68G22835 Striga asiatica
SGA_v2.0_scaffold7G03758 Striga asiatica
SGA_v2.0_scaffold96G29063 Striga asiatica
SHI04197 Sapria himalayana
Solyc04g014740.3 Solanum lycopersicum
Solyc06g072430.3 Solanum lycopersicum
Solyc10g084170.1 Solanum lycopersicum
Sopen04g006850 Solanum pennellii
Sopen06g028800 Solanum pennellii
Sopen10g033620 Solanum pennellii
Sp1g10730 Schrenkiella parvula
TAR365G1211 Trochodendron aralioides
TAR622G0718 Trochodendron aralioides
TAR624G0212 Trochodendron aralioides
TAR629G1863 Trochodendron aralioides
TAR629G2320 Trochodendron aralioides
THA.LOC104801613 Tarenaya hassleriana
THA.LOC104823542 Tarenaya hassleriana
THA.LOC104825581 Tarenaya hassleriana
Thecc.02G200000 Theobroma cacao
Thecc.06G232900 Theobroma cacao
Thhalv10008770m.g Eutrema salsugineum
Thhalv10015816m.g Eutrema salsugineum
Thhalv10027450m.g Eutrema salsugineum
TPR.G13163 Trifolium pratense
TPR.G15496 Trifolium pratense
TPR.G27398 Trifolium pratense
TPR.G2897 Trifolium pratense
TPR.G38293 Trifolium pratense
TWI36G0029 Tripterygium wilfordii
TWI38G0374 Tripterygium wilfordii
TWI75G0855 Tripterygium wilfordii
unitig_32.g11048 Utricularia gibba
unitig_52.g17421 Utricularia gibba
unitig_62.g23633 Utricularia gibba
vmacro01042 Vaccinium macrocarpon
VMungo0540G1760 Vigna mungo
VMungo1383G0720 Vigna mungo
VMungo1383G1702 Vigna mungo
Zm00001eb189410 Zea mays
Zm00001eb252920 Zea mays

User provided reference genes

Program Settings