Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18030 Brassica napus
A06p13360 Brassica napus
A07p30200 Brassica napus
A07p38650 Brassica napus
A08p30910 Brassica napus
A09p59510 Brassica napus
Aa31LG4G2820 Aethionema arabicum
Aa31LG7G2290 Aethionema arabicum
Aa31LG7G3850 Aethionema arabicum
Actinidia30235 Actinidia chinensis
Actinidia32198 Actinidia chinensis
Actinidia39643 Actinidia chinensis
Ah.08g217040 Amaranthus hybridus
AL1G29660 Arabidopsis lyrata
AL1G31690 Arabidopsis lyrata
AL2G32180 Arabidopsis lyrata
Aqoxy7G04093 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DE01N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8UUJ8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMZ3WA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8YREE Arachis hypogaea
AT1G17400 Arabidopsis thaliana
AT1G19115 Arabidopsis thaliana
AT1G72490 Arabidopsis thaliana
ATR0006G050 Amborella trichopoda
Atru.chr1.4046 Acer truncatum
Atru.chr7.1731 Acer truncatum
AUR62001451 Chenopodium quinoa
AUR62009914 Chenopodium quinoa
AUR62028277 Chenopodium quinoa
BcaB03g12936 Brassica carinata
BcaB03g13001 Brassica carinata
BcaB03g14464 Brassica carinata
BcaB03g15000 Brassica carinata
BcaB03g15671 Brassica carinata
BcaB05g24758 Brassica carinata
BcaC03g15392 Brassica carinata
BcaC07g38854 Brassica carinata
BcaC07g41420 Brassica carinata
BcaC08g45704 Brassica carinata
BcaC08g46700 Brassica carinata
BolC2t09051H Brassica oleracea
BolC5t30287H Brassica oleracea
BolC5t30453H Brassica oleracea
BolC6t38592H Brassica oleracea
BolC6t39725H Brassica oleracea
BolC8t49422H Brassica oleracea
BolC8t49540H Brassica oleracea
BolC8t51835H Brassica oleracea
BraA02t06851Z Brassica rapa
BraA06t24488Z Brassica rapa
BraA07t30657Z Brassica rapa
BraA08t35023Z Brassica rapa
BraA09t41328Z Brassica rapa
C02p30000 Brassica napus
C05p15820 Brassica napus
C05p17490 Brassica napus
C06p34900 Brassica napus
C06p34940 Brassica napus
C06p46840 Brassica napus
C08p17920 Brassica napus
C08p19210 Brassica napus
C08p42790 Brassica napus
CANSAT56G2660 Cannabis sativa
CANSAT56G2767 Cannabis sativa
CARHR017990 Cardamine hirsuta
CARHR019710 Cardamine hirsuta
CARHR065430 Cardamine hirsuta
Carub.0001s1716 Capsella rubella
Carub.0001s1874 Capsella rubella
Carub.0002s1934 Capsella rubella
Ca_23401_v3 Cicer arietinum L.
Cc04_g01130 Coffea canephora
Cc06_g12430 Coffea canephora
CDE05G0419 Ceratophyllum demersum
CDE06G1833 Ceratophyllum demersum
CDE11G0586 Ceratophyllum demersum
Ciclev10010597m.g Citrus clementina
Ciclev10027453m.g Citrus clementina
CiPaw.01G216700 Carya illinoinensis
CiPaw.02G134300 Carya illinoinensis
CiPaw.04G142000 Carya illinoinensis
ClCG03G014950 Citrullus lanatus
ClCG07G014520 Citrullus lanatus
COL.COLO4_18074 Corchorus olitorius
COL.COLO4_30726 Corchorus olitorius
Cpa.g.sc25.141 Carica papaya
CsaV3_1G041200 Cucumis sativus L.
CsaV3_3G030780 Cucumis sativus L.
CsaV3_7G034300 Cucumis sativus L.
CSS0009017 Camellia sinensis var. sinensis
DCAR_011937 Daucus carota
DCAR_016108 Daucus carota
DCAR_028485 Daucus carota
Dinv37852 Davidia involucrata
Dinv42411 Davidia involucrata
Duzib192G0993 Durio zibethinus
Duzib235G0718 Durio zibethinus
ECA247G1792 Erigeron canadensis
EL10Ac7g16436 Beta vulgaris
EL10Ac8g19029 Beta vulgaris
Eucgr.C00791 Eucalyptus grandis
Eucgr.J02802 Eucalyptus grandis
FAN02G0141 Fragaria x ananassa
FAN05G3688 Fragaria x ananassa
FAN09G4841 Fragaria x ananassa
FAN14G5432 Fragaria x ananassa
FAN19G2323 Fragaria x ananassa
FAN26G0184 Fragaria x ananassa
FAN26G1386 Fragaria x ananassa
FvH4_1g09000 Fragaria vesca
FvH4_6g35070 Fragaria vesca
Glyma.03G264200 Glycine max
Glyma.07G040800 Glycine max
Glyma.09G071100 Glycine max
Glyma.15G179200 Glycine max
Glyma.16G009400 Glycine max
Glyma.19G263200 Glycine max
Gohir.A05G139500 Gossypium hirsutum
Gohir.A06G077900 Gossypium hirsutum
Gohir.A10G055600 Gossypium hirsutum
Gohir.D05G141700 Gossypium hirsutum
Gohir.D06G076900 Gossypium hirsutum
Gohir.D10G057500 Gossypium hirsutum
Gorai.009G145800 Gossypium raimondii
Gorai.010G090000 Gossypium raimondii
Gorai.011G061600 Gossypium raimondii
GSVIVG01016727001 Vitis vinifera
HanXRQChr04g0094501 Helianthus annuus
HanXRQChr09g0277051 Helianthus annuus
Haze_16056 Corylus avellana
Haze_26034 Corylus avellana
Hma1.2p1_0229F.1_g096703 Hydrangea macrophylla
HPP92_004174 Vanilla planifolia
HPP92_009224 Vanilla planifolia
HPP92_026307 Vanilla planifolia
Hund05722 Selenicereus undatus
Hund08830 Selenicereus undatus
Hund18679 Selenicereus undatus
Lalb_Chr10g0101391 Lupinus albus
Lalb_Chr15g0076771 Lupinus albus
Lalb_Chr15g0076781 Lupinus albus
Lj3g0022268 Lotus japonicus
Lj4g0017530 Lotus japonicus
Lj5C33T9 Lonicera japonica
Lj6g0001874 Lotus japonicus
Lsat_1_v5_gn_1_37921 Lactuca sativa
Lsat_1_v5_gn_4_92641 Lactuca sativa
Lsat_1_v5_gn_5_139841 Lactuca sativa
Manes.04G147300 Manihot esculenta
Manes.11G017200 Manihot esculenta
Manes.16G093700 Manihot esculenta
MBI13_g00700_MAGBIO Magnolia biondii
MBI19_g05294_MAGBIO Magnolia biondii
MD09G1179400 Malus domestica
MD17G1165000 Malus domestica
Medtr2g042670 Medicago truncatula
Medtr8g021237 Medicago truncatula
MELO3C015533.2 Cucumis melo
MELO3C022671.2 Cucumis melo
MELO3C024339.2 Cucumis melo
Migut.D00931 Erythranthe guttata
Migut.I01096 Erythranthe guttata
Migut.J00917 Erythranthe guttata
MSTRG.26478 Avicennia marina
Nitab4.5_0000024g0290 Nicotiana tabacum
Nitab4.5_0000189g0090 Nicotiana tabacum
Nitab4.5_0000189g0120 Nicotiana tabacum
Nitab4.5_0000255g0310 Nicotiana tabacum
Nitab4.5_0000343g0370 Nicotiana tabacum
Nitab4.5_0002716g0010 Nicotiana tabacum
Nitab4.5_0003308g0030 Nicotiana tabacum
Nitab4.5_0004331g0020 Nicotiana tabacum
Nitab4.5_0005192g0020 Nicotiana tabacum
Nitab4.5_0006232g0050 Nicotiana tabacum
Nn6g35685 Nelumbo nucifera
Nn8g38592 Nelumbo nucifera
Oeu005162.1 Olea europaea
Oeu015495.1 Olea europaea
Oeu043637.1 Olea europaea
Oeu057901.1 Olea europaea
Oeu060642.1 Olea europaea
Os03g0180600 Oryza sativa ssp. japonica
Os07g0614400 Oryza sativa ssp. japonica
Os09g0439800 Oryza sativa ssp. japonica
Peaxi162Scf00038g02027 Petunia axillaris
Peaxi162Scf00207g01427 Petunia axillaris
Peaxi162Scf00418g00311 Petunia axillaris
Peaxi162Scf00880g00320 Petunia axillaris
PGR102G1333 Punica granatum
PGR119G0443 Punica granatum
PGSC0003DMG400016036 Solanum tuberosum
Phvul.009G225800 Phaseolus vulgaris
Phvul.009G262800 Phaseolus vulgaris
Phvul.010G128000 Phaseolus vulgaris
Potri.001G166700 Populus trichocarpa
Potri.003G068300 Populus trichocarpa
Potri.006G140100 Populus trichocarpa
Prupe.3G038300 Prunus persica
Prupe.7G195900 Prunus persica
Psat1g139680 Pisum sativum
Psat4g167720 Pisum sativum
PSO104G0026 Papaver somniferum
PSO135G0712 Papaver somniferum
PSO386G0050 Papaver somniferum
PSO421G0285 Papaver somniferum
PSO724G1034 Papaver somniferum
QL05p003883 Quercus lobata
QL11p001162 Quercus lobata
QL11p001207 Quercus lobata
RcHm_v2.0_Chr2g0146241 Rosa chinensis
Rhsim05G0005200 Rhododendron simsii
Rhsim08G0240600 Rhododendron simsii
Sabra01G0126600 Salix brachista
Sabra03G0040000 Salix brachista
SalBow5G1971 Salvia bowleyana
SalBow6G3597 Salvia bowleyana
SalBow6G4216 Salvia bowleyana
SalBow6G6250 Salvia bowleyana
Sc08g0008950 Simmondsia chinensis
Sc12g0010730 Simmondsia chinensis
Sed0005797 Sechium edule
Sed0006448 Sechium edule
Sed0015369 Sechium edule
Sed0025151 Sechium edule
Solyc07g042100.3 Solanum lycopersicum
Solyc12g049380.3 Solanum lycopersicum
Sopen06g022420 Solanum pennellii
Sopen07g021710 Solanum pennellii
Sopen12g023860 Solanum pennellii
Sp1g15540 Schrenkiella parvula
Sp1g17030 Schrenkiella parvula
Sp5g27570 Schrenkiella parvula
SpUn0033_0010 Schrenkiella parvula
TAR624G0298 Trochodendron aralioides
TAR636G2539 Trochodendron aralioides
THA.LOC104808059 Tarenaya hassleriana
THA.LOC104812257 Tarenaya hassleriana
THA.LOC104814044 Tarenaya hassleriana
Thecc.06G123400 Theobroma cacao
Thecc.09G074400 Theobroma cacao
Thhalv10009299m.g Eutrema salsugineum
Thhalv10009462m.g Eutrema salsugineum
Thhalv10019851m.g Eutrema salsugineum
TPR.G16733 Trifolium pratense
TWI14G0551 Tripterygium wilfordii
TWI34G1009 Tripterygium wilfordii
vmacro15046 Vaccinium macrocarpon
VMungo0331G1783 Vigna mungo
VMungo0540G1353 Vigna mungo
VMungo1309G0047 Vigna mungo
VMungo1309G0605 Vigna mungo
VMungo1309G1311 Vigna mungo
VMungo1309G1789 Vigna mungo
VMungo1309G2995 Vigna mungo
Zm00001eb314060 Zea mays
Zm00001eb392960 Zea mays

User provided reference genes

Program Settings