Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24720 Brassica napus
A04p00510 Brassica napus
A08p09760 Brassica napus
A09p54660 Brassica napus
A09p66240 Brassica napus
Aa31LG10G16570 Aethionema arabicum
Aa31LG1G9740 Aethionema arabicum
Aa31LG5G2060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis
Actinidia24347 Actinidia chinensis
Actinidia32214 Actinidia chinensis
Ah.15g093210 Amaranthus hybridus
Ah.15g093240 Amaranthus hybridus
AL5G45590 Arabidopsis lyrata
AL6G50650 Arabidopsis lyrata
Aqoxy5G00752 Aquilegia oxysepala
Aqoxy5G00753 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea
AT3G62810 Arabidopsis thaliana
AT4G02425 Arabidopsis thaliana
ATR0796G030 Amborella trichopoda
ATR0796G100 Amborella trichopoda
Atru.chr5.1150 Acer truncatum
Atru.chr5.1151 Acer truncatum
Atru.chr7.1564 Acer truncatum
AUR62008625 Chenopodium quinoa
AUR62008632 Chenopodium quinoa
AUR62033139 Chenopodium quinoa
AUR62033146 Chenopodium quinoa
BcaB02g08097 Brassica carinata
BcaB04g18179 Brassica carinata
BcaB05g23628 Brassica carinata
BcaB06g27116 Brassica carinata
BcaB06g28993 Brassica carinata
BcaB07g32361 Brassica carinata
BcaC02g10314 Brassica carinata
BcaC03g16124 Brassica carinata
BcaC03g16430 Brassica carinata
BcaC07g40760 Brassica carinata
BcaC07g42733 Brassica carinata
BolC1t01853H Brassica oleracea
BolC2t09909H Brassica oleracea
BolC4t24576H Brassica oleracea
BolC8t51336H Brassica oleracea
BolC9t55650H Brassica oleracea
BraA02t04691Z Brassica rapa
BraA02t07459Z Brassica rapa
BraA04t15771Z Brassica rapa
BraA08t32971Z Brassica rapa
BraA09t40877Z Brassica rapa
C02p38980 Brassica napus
C02p62500 Brassica napus
C04p30420 Brassica napus
C05p48610 Brassica napus
C06p13190 Brassica napus
C08p25960 Brassica napus
C08p37560 Brassica napus
C09p27860 Brassica napus
CAN.G1280.1 Capsicum annuum
CAN.G472.1 Capsicum annuum
CANSAT25G0502 Cannabis sativa
CANSAT25G1821 Cannabis sativa
CANSAT56G3445 Cannabis sativa
CARHR002170 Cardamine hirsuta
CARHR173080 Cardamine hirsuta
CARHR250690 Cardamine hirsuta
Carub.0001s0195 Capsella rubella
Carub.0005s2947 Capsella rubella
Carub.0006s3472 Capsella rubella
Ca_10338_v3 Cicer arietinum L.
Ca_10339_v3 Cicer arietinum L.
CBR_g24042 Chara braunii
Cc01_g20810 Coffea canephora
Cc01_g20820 Coffea canephora
CDE01G0164 Ceratophyllum demersum
CDE05G2513 Ceratophyllum demersum
CDE11G0633 Ceratophyllum demersum
CDE12G0521 Ceratophyllum demersum
Cfa005915 Carpinus fangiana
Cfa005916 Carpinus fangiana
Ciclev10021537m.g Citrus clementina
Ciclev10022953m.g Citrus clementina
CiPaw.07G108400 Carya illinoinensis
CiPaw.07G108500 Carya illinoinensis
ClCG10G010900 Citrullus lanatus
ClCG10G010910 Citrullus lanatus
COL.COLO4_23349 Corchorus olitorius
COL.COLO4_23350 Corchorus olitorius
Cpa.g.sc9.264 Carica papaya
Cre07.g332150 Chlamydomonas reinhardtii
CsaV3_4G000780 Cucumis sativus L.
CsaV3_4G000790 Cucumis sativus L.
CSS0000533 Camellia sinensis var. sinensis
CSS0018179 Camellia sinensis var. sinensis
CSS0049735 Camellia sinensis var. sinensis
DCAR_002828 Daucus carota
Dinv19696 Davidia involucrata
Dinv33053 Davidia involucrata
Duzib133G1209 Durio zibethinus
Duzib138G1033 Durio zibethinus
Duzib138G1545 Durio zibethinus
ECA247G1692 Erigeron canadensis
ECA247G3124 Erigeron canadensis
EL10Ac7g17468 Beta vulgaris
EL10Ac7g17509 Beta vulgaris
Eucgr.H01115 Eucalyptus grandis
Eucgr.K03478 Eucalyptus grandis
FAN11G2206 Fragaria x ananassa
FAN15G1012 Fragaria x ananassa
FAN16G1943 Fragaria x ananassa
FAN20G3185 Fragaria x ananassa
FAN21G2416 Fragaria x ananassa
FAN24G1157 Fragaria x ananassa
FAN25G1445 Fragaria x ananassa
FAN27G2781 Fragaria x ananassa
FvH4_2g25690 Fragaria vesca
FvH4_2g25692 Fragaria vesca
FvH4_3g17380 Fragaria vesca
Glyma.02G018200 Glycine max
Glyma.02G018300 Glycine max
Glyma.10G018500 Glycine max
Glyma.10G018600 Glycine max
Gohir.A08G075900 Gossypium hirsutum
Gohir.A08G076000 Gossypium hirsutum
Gohir.D08G085300 Gossypium hirsutum
Gohir.D08G085400 Gossypium hirsutum
Gorai.004G089800 Gossypium raimondii
Gorai.004G089900 Gossypium raimondii
GSVIVG01028011001 Vitis vinifera
HanXRQChr10g0284651 Helianthus annuus
HanXRQChr15g0465661 Helianthus annuus
Haze_04933 Corylus avellana
Haze_04934 Corylus avellana
Haze_04957 Corylus avellana
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla
HPP92_006921 Vanilla planifolia
HPP92_013721 Vanilla planifolia
HPP92_025205 Vanilla planifolia
Hund18156 Selenicereus undatus
Hund18157 Selenicereus undatus
Lalb_Chr06g0163511 Lupinus albus
Lalb_Chr21g0306851 Lupinus albus
Lj1A25T5 Lonicera japonica
Lj5g0008305 Lotus japonicus
Lj5g0010238 Lotus japonicus
Lsat_1_v5_gn_7_11800 Lactuca sativa
Lsat_1_v5_gn_9_5620 Lactuca sativa
Lsat_1_v5_gn_9_5640 Lactuca sativa
Manes.01G218600 Manihot esculenta
Manes.01G218700 Manihot esculenta
Mapoly0061s0038 Marchantia polymorpha
MBI19_g25354_MAGBIO Magnolia biondii
MBI19_g25355_MAGBIO Magnolia biondii
MCO07G465 Micromonas commoda
MD03G1287800 Malus domestica
MD03G1287900 Malus domestica
MD11G1310400 Malus domestica
MD11G1310500 Malus domestica
Medtr1g088550 Medicago truncatula
Medtr1g088580 Medicago truncatula
MELO3C017957.2 Cucumis melo
MELO3C017958.2 Cucumis melo
Migut.D00215 Erythranthe guttata
Migut.D00216 Erythranthe guttata
MSTRG.21632 Avicennia marina
Nitab4.5_0001879g0010 Nicotiana tabacum
Nitab4.5_0002470g0100 Nicotiana tabacum
Nitab4.5_0005805g0020 Nicotiana tabacum
Nitab4.5_0008207g0030 Nicotiana tabacum
Nn3g21481 Nelumbo nucifera
Nn3g21482 Nelumbo nucifera
Oeu010670.1 Olea europaea
Oeu048338.1 Olea europaea
Oeu053149.1 Olea europaea
Oeu054122.1 Olea europaea
Os01g0316500 Oryza sativa ssp. japonica
Os05g0363600 Oryza sativa ssp. japonica
Peaxi162Scf00001g00445 Petunia axillaris
Peaxi162Scf00399g00714 Petunia axillaris
Peaxi162Scf00545g00027 Petunia axillaris
PGR044G1069 Punica granatum
PGR119G0614 Punica granatum
PGSC0003DMG400011376 Solanum tuberosum
PGSC0003DMG402017938 Solanum tuberosum
Phvul.007G146100 Phaseolus vulgaris
Phvul.007G146200 Phaseolus vulgaris
Potri.002G204700 Populus trichocarpa
Potri.002G204750 Populus trichocarpa
Potri.014G129500 Populus trichocarpa
Potri.014G129800 Populus trichocarpa
Pp3c9_7930 Physcomitrium patens
Prupe.8G261000 Prunus persica
Prupe.8G261100 Prunus persica
Psat6g166040 Pisum sativum
Psat6g166360 Pisum sativum
PSO210G6076 Papaver somniferum
PSO832G1306 Papaver somniferum
PSO832G4034 Papaver somniferum
QL12p028510 Quercus lobata
QL12p028514 Quercus lobata
RcHm_v2.0_Chr2g0146991 Rosa chinensis
RcHm_v2.0_Chr6g0293961 Rosa chinensis
RcHm_v2.0_Chr6g0293971 Rosa chinensis
Rhsim01G0243300 Rhododendron simsii
Rhsim13G0010400 Rhododendron simsii
Sabra02G0154500 Salix brachista
Sabra02G0154700 Salix brachista
Sabra14G0096100 Salix brachista
Sabra14G0096400 Salix brachista
SalBow3G0298 Salvia bowleyana
SalBow3G1515 Salvia bowleyana
SalBow5G2922 Salvia bowleyana
Sc24g0003780 Simmondsia chinensis
Sc24g0003790 Simmondsia chinensis
Sed0013149 Sechium edule
Sed0019690 Sechium edule
SEGI_12569 Sequoiadendron giganteum
SEGI_38702 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00369 Striga asiatica
SGA_v2.0_scaffold2G01395 Striga asiatica
Solyc06g009120.3 Solanum lycopersicum
Solyc09g075100.3 Solanum lycopersicum
Sopen06g003880 Solanum pennellii
Sopen09g029920 Solanum pennellii
Sp5g00710 Schrenkiella parvula
Sp6g02330 Schrenkiella parvula
TAR365G1234 Trochodendron aralioides
TAR636G1278 Trochodendron aralioides
TAR636G2182 Trochodendron aralioides
THA.LOC104815928 Tarenaya hassleriana
THA.LOC104825970 Tarenaya hassleriana
Thecc.01G299900 Theobroma cacao
Thecc.01G300000 Theobroma cacao
Thhalv10006327m.g Eutrema salsugineum
Thhalv10028893m.g Eutrema salsugineum
TPR.G34008 Trifolium pratense
TPR.G34010 Trifolium pratense
TWI14G1447 Tripterygium wilfordii
TWI23G1032 Tripterygium wilfordii
TWI23G1311 Tripterygium wilfordii
unitig_22.g5241 Utricularia gibba
unitig_61.g26303 Utricularia gibba
vmacro02452 Vaccinium macrocarpon
vmacro15007 Vaccinium macrocarpon
vmacro15008 Vaccinium macrocarpon
VMungo0720G0138 Vigna mungo
VMungo0720G1979 Vigna mungo
VMungo0720G2130 Vigna mungo
Zm00001eb018450 Zea mays
Zm00001eb127170 Zea mays
Zm00001eb285590 Zea mays
Zm00001eb346590 Zea mays

User provided reference genes

Program Settings