Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13770 Brassica napus
A04p11220 Brassica napus
A06p11060 Brassica napus
A07p19600 Brassica napus
A09p61620 Brassica napus
Aa31LG1G70 Aethionema arabicum
Aa31LG2G3330 Aethionema arabicum
Aa31LG9G17190 Aethionema arabicum
Actinidia36340 Actinidia chinensis
Ah.02g127720 Amaranthus hybridus
Ah.16g101570 Amaranthus hybridus
AL1G27110 Arabidopsis lyrata
AL2G25090 Arabidopsis lyrata
AL7G52660 Arabidopsis lyrata
Aqoxy3G00209 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BAL03A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DFW75Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8Z18X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L9A6A1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9DR6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UCTU69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YG2QQU Arachis hypogaea
AT1G15040 Arabidopsis thaliana
AT1G66860 Arabidopsis thaliana
AT5G38200 Arabidopsis thaliana
ATR0807G094 Amborella trichopoda
Atru.chr1.1623 Acer truncatum
Atru.chr11.216 Acer truncatum
AUR62002821 Chenopodium quinoa
AUR62009032 Chenopodium quinoa
AUR62023271 Chenopodium quinoa
AUR62037284 Chenopodium quinoa
BcaB02g06569 Brassica carinata
BcaB02g06573 Brassica carinata
BcaB02g08017 Brassica carinata
BcaB05g24200 Brassica carinata
BcaB06g27174 Brassica carinata
BcaC02g09633 Brassica carinata
BcaC03g14768 Brassica carinata
BcaC08g44365 Brassica carinata
BolC2t08350H Brassica oleracea
BolC4t26070H Brassica oleracea
BolC5t30055H Brassica oleracea
BolC6t37006H Brassica oleracea
BolC8t52068H Brassica oleracea
BraA02t06434Z Brassica rapa
BraA04t16782Z Brassica rapa
BraA06t24286Z Brassica rapa
BraA07t29663Z Brassica rapa
BraA09t41534Z Brassica rapa
C02p22140 Brassica napus
C04p44920 Brassica napus
C05p13190 Brassica napus
C06p18000 Brassica napus
C08p45200 Brassica napus
CAN.G118.9 Capsicum annuum
CAN.G400.11 Capsicum annuum
CAN.G610.29 Capsicum annuum
CAN.G625.47 Capsicum annuum
CAN.G744.3 Capsicum annuum
CAN.G82.17 Capsicum annuum
CANSAT78G0266 Cannabis sativa
CARHR015580 Cardamine hirsuta
CARHR058990 Cardamine hirsuta
CARHR059000 Cardamine hirsuta
CARHR214480 Cardamine hirsuta
Carub.0001s1481 Capsella rubella
Carub.0002s1309 Capsella rubella
Carub.0005s1257 Capsella rubella
Ca_04140_v3 Cicer arietinum L.
Ca_06885_v3 Cicer arietinum L.
CBR_g1113 Chara braunii
Cc07_g08580 Coffea canephora
CDE04G1673 Ceratophyllum demersum
CDE04G2097 Ceratophyllum demersum
CDE04G3719 Ceratophyllum demersum
CDE06G2207 Ceratophyllum demersum
CDE12G0533 Ceratophyllum demersum
Cfa007897 Carpinus fangiana
Cfa007898 Carpinus fangiana
Cfa015843 Carpinus fangiana
Ciclev10011795m.g Citrus clementina
Ciclev10015304m.g Citrus clementina
CiPaw.03G064400 Carya illinoinensis
CiPaw.04G044100 Carya illinoinensis
CiPaw.05G241300 Carya illinoinensis
ClCG11G007760 Citrullus lanatus
COL.COLO4_07538 Corchorus olitorius
COL.COLO4_09363 Corchorus olitorius
COL.COLO4_09364 Corchorus olitorius
COL.COLO4_13761 Corchorus olitorius
COL.COLO4_34248 Corchorus olitorius
Cpa.g.sc170.37 Carica papaya
Cpa.g.sc65.62 Carica papaya
CsaV3_2G033820 Cucumis sativus L.
CSS0026920 Camellia sinensis var. sinensis
CSS0037360 Camellia sinensis var. sinensis
CSS0037856 Camellia sinensis var. sinensis
DCAR_017179 Daucus carota
DCAR_025904 Daucus carota
Dinv16126 Davidia involucrata
Dinv16129 Davidia involucrata
Dinv31600 Davidia involucrata
Dinv34797 Davidia involucrata
Duzib133G0572 Durio zibethinus
Duzib211G0486 Durio zibethinus
ECA232G1450 Erigeron canadensis
ECA238G4203 Erigeron canadensis
EL10Ac2g04536 Beta vulgaris
EL10Ac6g14315 Beta vulgaris
Eucgr.F02787 Eucalyptus grandis
FAN07G1392 Fragaria x ananassa
FAN12G0019 Fragaria x ananassa
FAN12G0491 Fragaria x ananassa
FAN17G2016 Fragaria x ananassa
FAN19G0922 Fragaria x ananassa
FAN22G1446 Fragaria x ananassa
FAN23G0727 Fragaria x ananassa
FAN28G1199 Fragaria x ananassa
FAN28G1468 Fragaria x ananassa
FvH4_1g15830 Fragaria vesca
FvH4_4g26770 Fragaria vesca
Glyma.02G088800 Glycine max
Glyma.18G294300 Glycine max
Glyma.19G002400 Glycine max
Gohir.A01G128501 Gossypium hirsutum
Gohir.A12G054500 Gossypium hirsutum
Gohir.D12G053300 Gossypium hirsutum
Gorai.008G056500 Gossypium raimondii
GSVIVG01011847001 Vitis vinifera
GSVIVG01030990001 Vitis vinifera
HanXRQChr00c0303g0573311 Helianthus annuus
HanXRQChr06g0177111 Helianthus annuus
HanXRQChr14g0438531 Helianthus annuus
HanXRQChr14g0438541 Helianthus annuus
HanXRQChr14g0438551 Helianthus annuus
HanXRQChr14g0438561 Helianthus annuus
HanXRQChr14g0440461 Helianthus annuus
HanXRQChr16g0509391 Helianthus annuus
Haze_00648 Corylus avellana
HPP92_005305 Vanilla planifolia
HPP92_008850 Vanilla planifolia
HPP92_008862 Vanilla planifolia
Hund16180 Selenicereus undatus
Hund25038 Selenicereus undatus
Lalb_Chr04g0257611 Lupinus albus
Lalb_Chr06g0176711 Lupinus albus
Lj1g0013074 Lotus japonicus
Lj2C439T12 Lonicera japonica
Lj2g0019944 Lotus japonicus
Lj4A187T27 Lonicera japonica
Lj4A190T75 Lonicera japonica
Lj5g0024824 Lotus japonicus
Lj9A529T38 Lonicera japonica
Lsat_1_v5_gn_2_81020 Lactuca sativa
Lsat_1_v5_gn_4_155800 Lactuca sativa
Manes.02G070700 Manihot esculenta
Manes.14G106500 Manihot esculenta
Mapoly0005s0158 Marchantia polymorpha
MBI10_g28011_MAGBIO Magnolia biondii
MBI16_g42428_MAGBIO Magnolia biondii
MD09G1255400 Malus domestica
MD16G1037600 Malus domestica
MD17G1248500 Malus domestica
Medtr1g110060 Medicago truncatula
Medtr6g004280 Medicago truncatula
Medtr7g082570 Medicago truncatula
MELO3C008152.2 Cucumis melo
Migut.L00495 Erythranthe guttata
Nitab4.5_0000625g0080 Nicotiana tabacum
Nitab4.5_0000694g0160 Nicotiana tabacum
Nitab4.5_0000753g0140 Nicotiana tabacum
Nitab4.5_0002112g0040 Nicotiana tabacum
Nitab4.5_0002772g0010 Nicotiana tabacum
Nitab4.5_0003652g0010 Nicotiana tabacum
Nn3g17942 Nelumbo nucifera
Nn4g23943 Nelumbo nucifera
Oeu008436.1 Olea europaea
Oeu014294.1 Olea europaea
Oeu030794.1 Olea europaea
Os01g0138800 Oryza sativa ssp. japonica
Peaxi162Scf00104g00148 Petunia axillaris
Peaxi162Scf00179g00314 Petunia axillaris
Peaxi162Scf00394g00093 Petunia axillaris
PGR004G2596 Punica granatum
PGSC0003DMG400024374 Solanum tuberosum
PGSC0003DMG400026382 Solanum tuberosum
PGSC0003DMG400030530 Solanum tuberosum
Phvul.004G002800 Phaseolus vulgaris
Phvul.008G008100 Phaseolus vulgaris
Potri.010G120600 Populus trichocarpa
Potri.017G118551 Populus trichocarpa
Pp3c7_4040 Physcomitrium patens
Prupe.1G316200 Prunus persica
Prupe.3G147100 Prunus persica
Psat0s1379g0240 Pisum sativum
Psat0s4667g0040 Pisum sativum
Psat3g097960 Pisum sativum
Psat6g225120 Pisum sativum
PSO017G4419 Papaver somniferum
PSO017G5433 Papaver somniferum
QL01p010858 Quercus lobata
QL02p049679 Quercus lobata
QL02p049694 Quercus lobata
QL02p050503 Quercus lobata
QL02p050533 Quercus lobata
RcHm_v2.0_Chr2g0105131 Rosa chinensis
RcHm_v2.0_Chr4g0434451 Rosa chinensis
RcHm_v2.0_Chr4g0434461 Rosa chinensis
Rhsim10G0069900 Rhododendron simsii
Rhsim10G0070200 Rhododendron simsii
Rhsim10G0070800 Rhododendron simsii
Sabra17G0098000 Salix brachista
SalBow5G5472 Salvia bowleyana
SalBow5G5671 Salvia bowleyana
Sc11g0003640 Simmondsia chinensis
Sc15g0003170 Simmondsia chinensis
Sed0001063 Sechium edule
Sed0014369 Sechium edule
SEGI_11092 Sequoiadendron giganteum
SEGI_11675 Sequoiadendron giganteum
SEGI_32181 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00627 Striga asiatica
SMO118G0487 Selaginella moellendorffii
Solyc02g086300.4 Solanum lycopersicum
Solyc03g034320.3 Solanum lycopersicum
Solyc05g008910.3 Solanum lycopersicum
Solyc05g016180.3 Solanum lycopersicum
Sopen02g030980 Solanum pennellii
Sopen03g007100 Solanum pennellii
Sopen05g004670 Solanum pennellii
Sp1g13430 Schrenkiella parvula
Sp5g21850 Schrenkiella parvula
Sp7g03890 Schrenkiella parvula
TAR426G0006 Trochodendron aralioides
TAR426G0007 Trochodendron aralioides
THA.LOC104805582 Tarenaya hassleriana
THA.LOC104822613 Tarenaya hassleriana
THA.LOC104824153 Tarenaya hassleriana
Thecc.04G129400 Theobroma cacao
Thecc.04G129500 Theobroma cacao
Thhalv10009317m.g Eutrema salsugineum
Thhalv10027778m.g Eutrema salsugineum
TPR.G17661 Trifolium pratense
TPR.G25245 Trifolium pratense
TPR.G27889 Trifolium pratense
TPR.G4923 Trifolium pratense
TPR.G7112 Trifolium pratense
TWI31G1077 Tripterygium wilfordii
TWI74G1610 Tripterygium wilfordii
unitig_748.g8496 Utricularia gibba
vmacro05529 Vaccinium macrocarpon
VMungo0464G1136 Vigna mungo
VMungo1383G3475 Vigna mungo
Zm00001eb037870 Zea mays
Zm00001eb037880 Zea mays
Zm00001eb335560 Zea mays

User provided reference genes

Program Settings