Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03340 Brassica napus
A03p07520 Brassica napus
A10p23050 Brassica napus
Aa31LG11G13600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5020 Anthoceros agrestis
Actinidia06228 Actinidia chinensis
Actinidia26808 Actinidia chinensis
AL6G26880 Arabidopsis lyrata
Aqoxy1G03738 Aquilegia oxysepala
Aqoxy2G00655 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9AN7FM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BCDK3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLBB9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJ0504 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8VJJK Arachis hypogaea
AT5G16010 Arabidopsis thaliana
ATR0697G018 Amborella trichopoda
ATR0697G147 Amborella trichopoda
Atru.chr12.1147 Acer truncatum
AUR62014282 Chenopodium quinoa
AUR62034152 Chenopodium quinoa
BcaB01g05009 Brassica carinata
BcaB08g36878 Brassica carinata
BcaC03g18464 Brassica carinata
BcaC04g18916 Brassica carinata
BolC2t06733H Brassica oleracea
BolC3t13371H Brassica oleracea
BolC9t58949H Brassica oleracea
BraA02t05305Z Brassica rapa
BraA03t10080Z Brassica rapa
BraA10t44374Z Brassica rapa
C02p08110 Brassica napus
C03p08730 Brassica napus
C09p61040 Brassica napus
CAN.G1256.14 Capsicum annuum
CAN.G1373.4 Capsicum annuum
CAN.G1498.2 Capsicum annuum
CAN.G1498.3 Capsicum annuum
CANSAT56G1617 Cannabis sativa
CANSAT56G2198 Cannabis sativa
CANSAT56G3273 Cannabis sativa
CANSAT56G3566 Cannabis sativa
CANSAT56G4413 Cannabis sativa
CARHR197310 Cardamine hirsuta
Carub.0006s1419 Capsella rubella
Ca_26955_v3 Cicer arietinum L.
Cc02_g09160 Coffea canephora
Cc02_g09170 Coffea canephora
Cc02_g09180 Coffea canephora
CDE07G0524 Ceratophyllum demersum
CDE07G0553 Ceratophyllum demersum
CDE07G0742 Ceratophyllum demersum
Cfa010470 Carpinus fangiana
Cfa010471 Carpinus fangiana
Cfa010472 Carpinus fangiana
Cfa025922 Carpinus fangiana
Ciclev10016285m.g Citrus clementina
Ciclev10017940m.g Citrus clementina
CiPaw.13G046100 Carya illinoinensis
CiPaw.14G036800 Carya illinoinensis
ClCG05G022040 Citrullus lanatus
ClCG05G022050 Citrullus lanatus
ClCG05G022060 Citrullus lanatus
COL.COLO4_16342 Corchorus olitorius
COL.COLO4_28607 Corchorus olitorius
COL.COLO4_28608 Corchorus olitorius
Cpa.g.sc54.63 Carica papaya
CsaV3_5G035100 Cucumis sativus L.
CsaV3_5G035110 Cucumis sativus L.
CsaV3_5G035120 Cucumis sativus L.
CSS0008064 Camellia sinensis var. sinensis
CSS0020458 Camellia sinensis var. sinensis
CSS0036906 Camellia sinensis var. sinensis
CSS0042597 Camellia sinensis var. sinensis
CSS0043608 Camellia sinensis var. sinensis
DCAR_006468 Daucus carota
DCAR_006469 Daucus carota
DCAR_006470 Daucus carota
DCAR_006471 Daucus carota
DCAR_006472 Daucus carota
Dinv06467 Davidia involucrata
Duzib106G1823 Durio zibethinus
Duzib177G0693 Durio zibethinus
ECA233G3622 Erigeron canadensis
ECA238G0359 Erigeron canadensis
EL10Ac4g08747 Beta vulgaris
Eucgr.G02660 Eucalyptus grandis
Eucgr.G02661 Eucalyptus grandis
Eucgr.G02662 Eucalyptus grandis
Eucgr.L02951 Eucalyptus grandis
FAN15G2762 Fragaria x ananassa
FAN15G3697 Fragaria x ananassa
FAN20G2547 Fragaria x ananassa
FAN24G0981 Fragaria x ananassa
FAN24G2564 Fragaria x ananassa
FvH4_2g07871 Fragaria vesca
FvH4_2g07872 Fragaria vesca
FvH4_2g07900 Fragaria vesca
Glyma.02G081100 Glycine max
Glyma.02G081200 Glycine max
Gohir.A10G195200 Gossypium hirsutum
Gohir.A10G195300 Gossypium hirsutum
Gohir.A11G232000 Gossypium hirsutum
Gohir.D10G202100 Gossypium hirsutum
Gohir.D10G202200 Gossypium hirsutum
Gohir.D10G202300 Gossypium hirsutum
Gohir.D10G202350 Gossypium hirsutum
Gohir.D11G243200 Gossypium hirsutum
Gorai.007G257600 Gossypium raimondii
Gorai.011G226900 Gossypium raimondii
Gorai.011G227000 Gossypium raimondii
GSVIVG01012448001 Vitis vinifera
GSVIVG01012450001 Vitis vinifera
GSVIVG01014067001 Vitis vinifera
HanXRQChr05g0145651 Helianthus annuus
HanXRQChr07g0194501 Helianthus annuus
HanXRQChr07g0204551 Helianthus annuus
HanXRQChr12g0367051 Helianthus annuus
HanXRQChr13g0400801 Helianthus annuus
HanXRQChr14g0455411 Helianthus annuus
HanXRQChr14g0455471 Helianthus annuus
Hma1.2p1_0098F.1_g048390 Hydrangea macrophylla
Hma1.2p1_0153F.1_g067930 Hydrangea macrophylla
HPP92_001881 Vanilla planifolia
Hund06818 Selenicereus undatus
Lalb_Chr02g0150841 Lupinus albus
Lalb_Chr21g0312761 Lupinus albus
Lj2A38G21 Lonicera japonica
Lj2A38G22 Lonicera japonica
Lj2g0000108 Lotus japonicus
Lj2g0012503 Lotus japonicus
Lj2g0017217 Lotus japonicus
Lsat_1_v5_gn_0_35680 Lactuca sativa
Lsat_1_v5_gn_2_107320 Lactuca sativa
Lsat_1_v5_gn_2_107340 Lactuca sativa
Lsat_1_v5_gn_8_22421 Lactuca sativa
Lsat_1_v5_gn_8_22461 Lactuca sativa
Manes.07G083100 Manihot esculenta
Manes.10G070400 Manihot esculenta
Mapoly0126s0018 Marchantia polymorpha
MBI11_g11716_MAGBIO Magnolia biondii
MBI11_g11717_MAGBIO Magnolia biondii
MBI11_g33442_MAGBIO Magnolia biondii
MBI11_g39496_MAGBIO Magnolia biondii
MBI11_g47689_MAGBIO Magnolia biondii
MD02G1261000 Malus domestica
MD02G1265600 Malus domestica
MD07G1060000 Malus domestica
Medtr6g037330 Medicago truncatula
Medtr6g037340 Medicago truncatula
Medtr6g037370 Medicago truncatula
Medtr6g043740 Medicago truncatula
MELO3C012321.2 Cucumis melo
MELO3C012323.2 Cucumis melo
MELO3C012324.2 Cucumis melo
MELO3C012325.2 Cucumis melo
Migut.F01552 Erythranthe guttata
Migut.F01646 Erythranthe guttata
Migut.F01647 Erythranthe guttata
Migut.F01648 Erythranthe guttata
MSTRG.15578 Avicennia marina
Nitab4.5_0001989g0010 Nicotiana tabacum
Nitab4.5_0001989g0040 Nicotiana tabacum
Nitab4.5_0001989g0070 Nicotiana tabacum
Nitab4.5_0002640g0050 Nicotiana tabacum
Nitab4.5_0004431g0030 Nicotiana tabacum
Nn6g34750 Nelumbo nucifera
Oeu002950.1 Olea europaea
Oeu015278.1 Olea europaea
Oeu015281.1 Olea europaea
Oeu015282.1 Olea europaea
Oeu016034.1 Olea europaea
Oeu016035.1 Olea europaea
Oeu033259.1 Olea europaea
Os07g0162100 Oryza sativa ssp. japonica
Peaxi162Scf00120g00102 Petunia axillaris
Peaxi162Scf00120g00814 Petunia axillaris
PGR142G0842 Punica granatum
PGR142G2398 Punica granatum
PGSC0003DMG400000984 Solanum tuberosum
PGSC0003DMG400000985 Solanum tuberosum
PGSC0003DMG400000986 Solanum tuberosum
Phvul.004G094000 Phaseolus vulgaris
Phvul.004G094100 Phaseolus vulgaris
Potri.008G012700 Populus trichocarpa
Potri.008G012800 Populus trichocarpa
Potri.008G013100 Populus trichocarpa
Potri.010G245200 Populus trichocarpa
Potri.010G245266 Populus trichocarpa
Potri.010G245332 Populus trichocarpa
Pp3c25_4320 Physcomitrium patens
Pp3c6_24400 Physcomitrium patens
Prupe.2G066100 Prunus persica
Prupe.2G066300 Prunus persica
Prupe.2G066400 Prunus persica
Psat1g102080 Pisum sativum
PSO170G1550 Papaver somniferum
PSO339G0758 Papaver somniferum
PSO339G5819 Papaver somniferum
PSO339G6304 Papaver somniferum
PSO384G1884 Papaver somniferum
PSO384G2043 Papaver somniferum
PSO801G0442 Papaver somniferum
QL04p049683 Quercus lobata
RcHm_v2.0_Chr6g0262341 Rosa chinensis
RcHm_v2.0_Chr6g0262351 Rosa chinensis
RcHm_v2.0_Chr6g0262361 Rosa chinensis
Rhsim05G0177500 Rhododendron simsii
Rhsim09G0139500 Rhododendron simsii
Rhsim09G0139600 Rhododendron simsii
Rhsim09G0139700 Rhododendron simsii
Rhsim09G0139800 Rhododendron simsii
Rhsim09G0139900 Rhododendron simsii
Sabra08G0008000 Salix brachista
Sabra10G0191600 Salix brachista
SalBow6G4544 Salvia bowleyana
Sc09g0004840 Simmondsia chinensis
Sed0001644 Sechium edule
Sed0003369 Sechium edule
Sed0014422 Sechium edule
SEGI_01878 Sequoiadendron giganteum
SEGI_17658 Sequoiadendron giganteum
SEGI_19837 Sequoiadendron giganteum
SEGI_36424 Sequoiadendron giganteum
SEGI_39192 Sequoiadendron giganteum
SMO145G0163 Selaginella moellendorffii
SMO201G0122 Selaginella moellendorffii
Solyc11g006270.2 Solanum lycopersicum
Solyc11g006290.2 Solanum lycopersicum
Solyc11g006300.2 Solanum lycopersicum
Sopen11g002200 Solanum pennellii
Sopen11g002210 Solanum pennellii
Sp6g28110 Schrenkiella parvula
TAR636G0970 Trochodendron aralioides
TAR636G3227 Trochodendron aralioides
Thecc.05G244800 Theobroma cacao
Thecc.10G123000 Theobroma cacao
Thecc.10G123100 Theobroma cacao
Thecc.10G123200 Theobroma cacao
Thecc.10G123600 Theobroma cacao
Thhalv10014355m.g Eutrema salsugineum
TPR.G23115 Trifolium pratense
TPR.G23117 Trifolium pratense
TPR.G38382 Trifolium pratense
TWI38G1192 Tripterygium wilfordii
unitig_899.g15358 Utricularia gibba
vmacro10337 Vaccinium macrocarpon
vmacro10338 Vaccinium macrocarpon
vmacro10339 Vaccinium macrocarpon
vmacro10341 Vaccinium macrocarpon
vmacro20010 Vaccinium macrocarpon
VMungo0464G1279 Vigna mungo
VMungo0464G1785 Vigna mungo
VMungo0464G1820 Vigna mungo
Zm00001eb117280 Zea mays
Zm00001eb300560 Zea mays
Zm00001eb300570 Zea mays

User provided reference genes

Program Settings