Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06970 Brassica napus
A01p08040 Brassica napus
A03p60640 Brassica napus
A04p18730 Brassica napus
A09p56320 Brassica napus
Aa31LG2G19020 Aethionema arabicum
Aa31LG2G20480 Aethionema arabicum
Aa31LG7G11370 Aethionema arabicum
Actinidia01290 Actinidia chinensis
Actinidia22248 Actinidia chinensis
Actinidia22249 Actinidia chinensis
Ah.11g044010 Amaranthus hybridus
AL4G14850 Arabidopsis lyrata
AL7G20740 Arabidopsis lyrata
AL7G22110 Arabidopsis lyrata
AL8G24220 Arabidopsis lyrata
Aqoxy7G02750 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D04E55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQG69K Arachis hypogaea
AT2G24420 Arabidopsis thaliana
AT4G30090 Arabidopsis thaliana
AT4G31340 Arabidopsis thaliana
ATR0626G381 Amborella trichopoda
ATR0693G439 Amborella trichopoda
Atru.chr7.2676 Acer truncatum
AUR62020636 Chenopodium quinoa
AUR62038745 Chenopodium quinoa
BcaB06g27966 Brassica carinata
BcaB06g27967 Brassica carinata
BcaB06g28621 Brassica carinata
BcaC02g08457 Brassica carinata
BcaC02g08459 Brassica carinata
BcaC02g08462 Brassica carinata
BcaC07g40934 Brassica carinata
BcaC09g51786 Brassica carinata
BcaC09g51913 Brassica carinata
BcaNung01529 Brassica carinata
BcaNung05320 Brassica carinata
BolC1t00751H Brassica oleracea
BolC1t00893H Brassica oleracea
BolC4t25911H Brassica oleracea
BolC4t26954H Brassica oleracea
BolC7t46310H Brassica oleracea
BolC8t51501H Brassica oleracea
BraA01t00645Z Brassica rapa
BraA01t00750Z Brassica rapa
BraA03t15106Z Brassica rapa
BraA04t17483Z Brassica rapa
BraA09t41027Z Brassica rapa
C01p07700 Brassica napus
C01p09030 Brassica napus
C04p43310 Brassica napus
C04p54020 Brassica napus
C07p58550 Brassica napus
C08p39280 Brassica napus
CAN.G195.4 Capsicum annuum
CAN.G940.9 Capsicum annuum
CANSAT11G0691 Cannabis sativa
CANSAT25G0789 Cannabis sativa
CARHR117640 Cardamine hirsuta
CARHR238000 Cardamine hirsuta
CARHR239220 Cardamine hirsuta
Carub.0004s0377 Capsella rubella
Carub.0007s0922 Capsella rubella
Carub.0007s1051 Capsella rubella
Ca_15631_v3 Cicer arietinum L.
CBR_g30938 Chara braunii
Cc00_g12730 Coffea canephora
Cc00_g12740 Coffea canephora
Cc06_g21730 Coffea canephora
CDE06G0091 Ceratophyllum demersum
Cfa013322 Carpinus fangiana
Ciclev10008249m.g Citrus clementina
CiPaw.07G208800 Carya illinoinensis
CiPaw.08G022000 Carya illinoinensis
ClCG08G012460 Citrullus lanatus
ClCG11G013940 Citrullus lanatus
COL.COLO4_18617 Corchorus olitorius
Cpa.g.sc328.1 Carica papaya
Cpa.g.sc95.23 Carica papaya
CsaV3_2G031150 Cucumis sativus L.
CsaV3_3G047330 Cucumis sativus L.
CSS0011343 Camellia sinensis var. sinensis
CSS0015738 Camellia sinensis var. sinensis
CSS0018914 Camellia sinensis var. sinensis
DCAR_000689 Daucus carota
DCAR_004551 Daucus carota
DCAR_019798 Daucus carota
Dinv13248 Davidia involucrata
Dinv26437 Davidia involucrata
Dinv36353 Davidia involucrata
Duzib168G1639 Durio zibethinus
Duzib168G2001 Durio zibethinus
ECA240G1424 Erigeron canadensis
ECA240G2840 Erigeron canadensis
ECA246G1443 Erigeron canadensis
EL10Ac2g03706 Beta vulgaris
Eucgr.C02115 Eucalyptus grandis
Eucgr.L02014 Eucalyptus grandis
FAN12G2110 Fragaria x ananassa
FAN12G2632 Fragaria x ananassa
FAN15G1304 Fragaria x ananassa
FAN20G2144 Fragaria x ananassa
FAN22G1736 Fragaria x ananassa
FAN27G0789 Fragaria x ananassa
FvH4_2g36360 Fragaria vesca
FvH4_4g07490 Fragaria vesca
Glyma.04G078500 Glycine max
Glyma.06G080100 Glycine max
Gohir.A05G065850 Gossypium hirsutum
Gohir.A05G065951 Gossypium hirsutum
Gohir.D05G068300 Gossypium hirsutum
Gorai.009G069200 Gossypium raimondii
GSVIVG01035555001 Vitis vinifera
HanXRQChr03g0082951 Helianthus annuus
HanXRQChr13g0411771 Helianthus annuus
HanXRQChr17g0537281 Helianthus annuus
HanXRQChr17g0538701 Helianthus annuus
Haze_21809 Corylus avellana
Haze_21811 Corylus avellana
Hma1.2p1_0891F.1_g233100 Hydrangea macrophylla
Hma1.2p1_0891F.1_g233110 Hydrangea macrophylla
Hma1.2p1_0891F.1_g233120 Hydrangea macrophylla
HPP92_004710 Vanilla planifolia
HPP92_010794 Vanilla planifolia
Hund03271 Selenicereus undatus
Hund19391 Selenicereus undatus
Lalb_Chr08g0243391 Lupinus albus
Lalb_Chr11g0064281 Lupinus albus
Lalb_Chr23g0269331 Lupinus albus
Lj1g0017245 Lotus japonicus
Lj5A616G4 Lonicera japonica
Lj7A750G48 Lonicera japonica
Lj8C424T3 Lonicera japonica
Lj8C430T1 Lonicera japonica
Lsat_1_v5_gn_3_24601 Lactuca sativa
Lsat_1_v5_gn_5_59921 Lactuca sativa
Lsat_1_v5_gn_6_72860 Lactuca sativa
Lsat_1_v5_gn_7_55401 Lactuca sativa
Manes.03G002000 Manihot esculenta
Manes.16G136900 Manihot esculenta
Mapoly0004s0241 Marchantia polymorpha
MBI13_g31541_MAGBIO Magnolia biondii
MBI16_g34881_MAGBIO Magnolia biondii
MD08G1121400 Malus domestica
MD15G1100200 Malus domestica
MD15G1100300 Malus domestica
MD15G1100400 Malus domestica
MD16G1251700 Malus domestica
Medtr3g109330 Medicago truncatula
MELO3C003595.2 Cucumis melo
MELO3C011165.2 Cucumis melo
Migut.A00460 Erythranthe guttata
Migut.E01410 Erythranthe guttata
MSTRG.11823 Avicennia marina
MSTRG.1740 Avicennia marina
MSTRG.19380 Avicennia marina
Nitab4.5_0000860g0180 Nicotiana tabacum
Nitab4.5_0000919g0110 Nicotiana tabacum
Nitab4.5_0001392g0090 Nicotiana tabacum
Nitab4.5_0004459g0010 Nicotiana tabacum
Nitab4.5_0006603g0020 Nicotiana tabacum
Nitab4.5_0012989g0010 Nicotiana tabacum
Nn2g12753 Nelumbo nucifera
Nn8g40895 Nelumbo nucifera
Oeu002014.1 Olea europaea
Oeu026032.1 Olea europaea
Oeu055447.1 Olea europaea
Oeu059295.1 Olea europaea
Os04g0607150 Oryza sativa ssp. japonica
Os08g0519400 Oryza sativa ssp. japonica
Os09g0497700 Oryza sativa ssp. japonica
Peaxi162Scf00045g01455 Petunia axillaris
Peaxi162Scf00213g00118 Petunia axillaris
Peaxi162Scf00324g00228 Petunia axillaris
Peaxi162Scf00688g00026 Petunia axillaris
PGR044G2224 Punica granatum
PGSC0003DMG400014854 Solanum tuberosum
PGSC0003DMG400028754 Solanum tuberosum
PGSC0003DMG400029563 Solanum tuberosum
Phvul.009G104300 Phaseolus vulgaris
Potri.006G076700 Populus trichocarpa
Potri.006G276900 Populus trichocarpa
Potri.018G003700 Populus trichocarpa
Pp3c15_14170 Physcomitrium patens
Pp3c16_21550 Physcomitrium patens
Pp3c25_13760 Physcomitrium patens
Pp3c26_6710 Physcomitrium patens
Pp3c4_17220 Physcomitrium patens
Prupe.1G078300 Prunus persica
Prupe.1G455000 Prunus persica
Psat3g174040 Pisum sativum
Psat5g023040 Pisum sativum
Psat5g023080 Pisum sativum
PSO144G0166 Papaver somniferum
PSO170G0184 Papaver somniferum
QL12p026047 Quercus lobata
RcHm_v2.0_Chr4g0399971 Rosa chinensis
RcHm_v2.0_Chr6g0305521 Rosa chinensis
Sabra06G0214600 Salix brachista
Sabra18G0001800 Salix brachista
SalBow8G3867 Salvia bowleyana
Sc06g0001220 Simmondsia chinensis
Sc09g0007840 Simmondsia chinensis
Sed0013595 Sechium edule
Sed0016087 Sechium edule
Sed0019725 Sechium edule
Sed0025325 Sechium edule
SEGI_07372 Sequoiadendron giganteum
SEGI_19030 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40649 Striga asiatica
SGA_v2.0_scaffold27G11647 Striga asiatica
SMO290G0005 Selaginella moellendorffii
SMO290G0014 Selaginella moellendorffii
SMO356G0135 Selaginella moellendorffii
SMO356G0475 Selaginella moellendorffii
Solyc05g010750.3 Solanum lycopersicum
Solyc07g008970.4 Solanum lycopersicum
Solyc08g006030.4 Solanum lycopersicum
Solyc08g074290.3 Solanum lycopersicum
Sopen02g018210 Solanum pennellii
Sopen07g004920 Solanum pennellii
Sopen08g002000 Solanum pennellii
Sopen08g020370 Solanum pennellii
Sopen08g022940 Solanum pennellii
Sp4g03440 Schrenkiella parvula
Sp7g27940 Schrenkiella parvula
Sp7g29200 Schrenkiella parvula
TAR383G0456 Trochodendron aralioides
TAR383G0485 Trochodendron aralioides
TAR625G0782 Trochodendron aralioides
TAR626G1487 Trochodendron aralioides
THA.LOC104803590 Tarenaya hassleriana
THA.LOC104803883 Tarenaya hassleriana
THA.LOC104814665 Tarenaya hassleriana
THA.LOC104814666 Tarenaya hassleriana
THA.LOC104819928 Tarenaya hassleriana
Thecc.09G004300 Theobroma cacao
Thecc.09G183600 Theobroma cacao
Thhalv10000173m.g Eutrema salsugineum
Thhalv10015505m.g Eutrema salsugineum
Thhalv10025225m.g Eutrema salsugineum
Thhalv10025377m.g Eutrema salsugineum
TPR.G1341 Trifolium pratense
TPR.G1355 Trifolium pratense
TWI32G0516 Tripterygium wilfordii
TWI34G1233 Tripterygium wilfordii
TWI63G0924 Tripterygium wilfordii
unitig_747.g21906 Utricularia gibba
vmacro20828 Vaccinium macrocarpon
VMungo1309G0855 Vigna mungo
Zm00001eb022880 Zea mays
Zm00001eb035730 Zea mays
Zm00001eb102150 Zea mays
Zm00001eb132690 Zea mays
Zm00001eb174670 Zea mays
Zm00001eb380370 Zea mays

User provided reference genes

Program Settings