Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p36170 Brassica napus
Aa31csc1168G10 Aethionema arabicum
Aa31csc822G10 Aethionema arabicum
Actinidia02791 Actinidia chinensis
Actinidia11788 Actinidia chinensis
Actinidia34821 Actinidia chinensis
Actinidia34846 Actinidia chinensis
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBVE6B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea
AT2G07749 Arabidopsis thaliana
ATMG00490 Arabidopsis thaliana
ATMG01110 Arabidopsis thaliana
ATMG01410 Arabidopsis thaliana
ATR0502G001 Amborella trichopoda
ATR0575G001 Amborella trichopoda
ATR0661G179 Amborella trichopoda
ATR0794G013 Amborella trichopoda
BcaC05g26896 Brassica carinata
BcaC05g27131 Brassica carinata
BcaC08g43702 Brassica carinata
BcaC08g43703 Brassica carinata
BcaC08g43707 Brassica carinata
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus
BolC6t36210H Brassica oleracea
BolSC28t60340H Brassica oleracea
BraSC177t45771Z Brassica rapa
BraSC48t46265Z Brassica rapa
BraSC77t46647Z Brassica rapa
CAN.G1.4 Capsicum annuum
CAN.G1.6 Capsicum annuum
CAN.G1001.30 Capsicum annuum
CAN.G1109.11 Capsicum annuum
CAN.G1126.7 Capsicum annuum
CAN.G1159.14 Capsicum annuum
CAN.G1167.15 Capsicum annuum
CAN.G1167.16 Capsicum annuum
CAN.G134.22 Capsicum annuum
CAN.G1355.2 Capsicum annuum
CAN.G140.15 Capsicum annuum
CAN.G1594.3 Capsicum annuum
CAN.G1673.2 Capsicum annuum
CAN.G1673.7 Capsicum annuum
CAN.G200.4 Capsicum annuum
CAN.G248.9 Capsicum annuum
CAN.G26.9 Capsicum annuum
CAN.G31.19 Capsicum annuum
CAN.G505.2 Capsicum annuum
CAN.G505.3 Capsicum annuum
CAN.G70.3 Capsicum annuum
CAN.G72.10 Capsicum annuum
CAN.G819.4 Capsicum annuum
CAN.G841.4 Capsicum annuum
CAN.G85.19 Capsicum annuum
CAN.G85.22 Capsicum annuum
CAN.G950.7 Capsicum annuum
CAN.G993.8 Capsicum annuum
CAN.G999.39 Capsicum annuum
CARHR283370 Cardamine hirsuta
Ca_07734_v3 Cicer arietinum L.
Ca_07940_v3 Cicer arietinum L.
Ca_08791_v3 Cicer arietinum L.
Ca_22174_v3 Cicer arietinum L.
Ca_26184_v3 Cicer arietinum L.
Cfa021334 Carpinus fangiana
Cfa023009 Carpinus fangiana
COL.COLO4_02507 Corchorus olitorius
COL.COLO4_04088 Corchorus olitorius
Cpa.g.sc263.18 Carica papaya
Cpa.g.sc263.8 Carica papaya
Cpa.g.sc35.17 Carica papaya
CsaV3_UNG194490 Cucumis sativus L.
CsaV3_UNG203660 Cucumis sativus L.
CsaV3_UNG207980 Cucumis sativus L.
CsaV3_UNG209410 Cucumis sativus L.
CsaV3_UNG209420 Cucumis sativus L.
CSS0017389 Camellia sinensis var. sinensis
Dinv06680 Davidia involucrata
Dinv06708 Davidia involucrata
Dinv06709 Davidia involucrata
Duzib116G0123 Durio zibethinus
Eucgr.J01097 Eucalyptus grandis
Glyma.08G300900 Glycine max
Glyma.12G175100 Glycine max
Glyma.17G185300 Glycine max
Gohir.A06G098104 Gossypium hirsutum
Gorai.001G162700 Gossypium raimondii
Gorai.001G162800 Gossypium raimondii
Gorai.009G406600 Gossypium raimondii
GSVIVG01029663001 Vitis vinifera
HPP92_006535 Vanilla planifolia
HPP92_006569 Vanilla planifolia
Lalb_Chr00c24g0406801 Lupinus albus
Lalb_Chr00c24g0406811 Lupinus albus
Lalb_Chr00c24g0406851 Lupinus albus
Lalb_Chr00c24g0406861 Lupinus albus
Lj2A1234T113 Lonicera japonica
Lj2P1229T103 Lonicera japonica
Lj5g0008059 Lotus japonicus
LjContig00315g0012920 Lotus japonicus
Lsat_1_v5_gn_0_35081 Lactuca sativa
Lsat_1_v5_gn_2_61441 Lactuca sativa
Lsat_1_v5_gn_5_13340 Lactuca sativa
Lsat_1_v5_gn_5_172580 Lactuca sativa
Lsat_1_v5_gn_8_124640 Lactuca sativa
Lsat_1_v5_gn_8_124660 Lactuca sativa
Lsat_1_v5_gn_8_93860 Lactuca sativa
Lsat_1_v5_gn_8_93880 Lactuca sativa
MBI04_g15067_MAGBIO Magnolia biondii
MBI04_g40993_MAGBIO Magnolia biondii
MBI05_g05345_MAGBIO Magnolia biondii
MBI05_g05346_MAGBIO Magnolia biondii
MBI05_g16262_MAGBIO Magnolia biondii
MBI06_g04141_MAGBIO Magnolia biondii
MBI14_g38258_MAGBIO Magnolia biondii
MBI14_g38259_MAGBIO Magnolia biondii
MBI14_g38260_MAGBIO Magnolia biondii
MBI14_g38700_MAGBIO Magnolia biondii
MBI14_g44090_MAGBIO Magnolia biondii
MBI14_g44092_MAGBIO Magnolia biondii
Medtr0212s0050 Medicago truncatula
Medtr2154s0010 Medicago truncatula
Nitab4.5_0000031g0200 Nicotiana tabacum
Nitab4.5_0000172g0830 Nicotiana tabacum
Nitab4.5_0000172g1410 Nicotiana tabacum
Nitab4.5_0000172g1900 Nicotiana tabacum
Nitab4.5_0000172g2030 Nicotiana tabacum
Nitab4.5_0000172g2140 Nicotiana tabacum
Nitab4.5_0000177g0020 Nicotiana tabacum
Nitab4.5_0000592g0110 Nicotiana tabacum
Nitab4.5_0000592g0160 Nicotiana tabacum
Nitab4.5_0001023g0120 Nicotiana tabacum
Nitab4.5_0001152g0860 Nicotiana tabacum
Nitab4.5_0001155g0080 Nicotiana tabacum
Nitab4.5_0001234g0080 Nicotiana tabacum
Nitab4.5_0001607g0070 Nicotiana tabacum
Nitab4.5_0001788g0190 Nicotiana tabacum
Nitab4.5_0001796g0150 Nicotiana tabacum
Nitab4.5_0001796g0170 Nicotiana tabacum
Nitab4.5_0002716g0050 Nicotiana tabacum
Nitab4.5_0003758g0080 Nicotiana tabacum
Nitab4.5_0004300g0040 Nicotiana tabacum
Nitab4.5_0004300g0090 Nicotiana tabacum
Nitab4.5_0005831g0050 Nicotiana tabacum
Nitab4.5_0005831g0090 Nicotiana tabacum
Nitab4.5_0007225g0070 Nicotiana tabacum
Nitab4.5_0009256g0020 Nicotiana tabacum
Nitab4.5_0009709g0040 Nicotiana tabacum
Nitab4.5_0012260g0040 Nicotiana tabacum
Nitab4.5_0017902g0020 Nicotiana tabacum
Nitab4.5_0019320g0010 Nicotiana tabacum
Nitab4.5_0026598g0010 Nicotiana tabacum
Nitab4.5_0027526g0010 Nicotiana tabacum
Nn003s41388 Nelumbo nucifera
Nn1g09933 Nelumbo nucifera
Nn1g10009 Nelumbo nucifera
Nn1g10106 Nelumbo nucifera
Nn1g10113 Nelumbo nucifera
Nn1g10197 Nelumbo nucifera
Oeu021479.1 Olea europaea
Peaxi162Scf00611g00057 Petunia axillaris
Peaxi162Scf00625g00034 Petunia axillaris
Peaxi162Scf00625g00036 Petunia axillaris
Peaxi162Scf00625g00037 Petunia axillaris
Peaxi162Scf00651g00640 Petunia axillaris
PGSC0003DMG400001137 Solanum tuberosum
PGSC0003DMG400004841 Solanum tuberosum
PGSC0003DMG400006470 Solanum tuberosum
PGSC0003DMG400023071 Solanum tuberosum
PGSC0003DMG400033607 Solanum tuberosum
Psat4g178320 Pisum sativum
RcHm_v2.0_MTg0498601 Rosa chinensis
Rhsim06G0107900 Rhododendron simsii
RhsimMtG0003800 Rhododendron simsii
SabraMtG0005500 Salix brachista
SalBow1G8110 Salvia bowleyana
SalBow7G1147 Salvia bowleyana
Sc05g0004260 Simmondsia chinensis
Sc05g0004270 Simmondsia chinensis
Sed0005295 Sechium edule
Sed0005389 Sechium edule
Sed0012925 Sechium edule
Sed0016072 Sechium edule
Sed0020463 Sechium edule
Sed0024408 Sechium edule
Sed0024774 Sechium edule
SGA_v2.0_scaffold148G36449 Striga asiatica
SGA_v2.0_scaffold245G44464 Striga asiatica
SGA_v2.0_scaffold245G44628 Striga asiatica
SGA_v2.0_scaffold245G44641 Striga asiatica
SGA_v2.0_scaffold245G44665 Striga asiatica
SGA_v2.0_scaffold255G45438 Striga asiatica
SGA_v2.0_scaffold317G48442 Striga asiatica
SGA_v2.0_scaffold339G49284 Striga asiatica
SGA_v2.0_scaffold400G50856 Striga asiatica
SGA_v2.0_scaffold400G50959 Striga asiatica
SGA_v2.0_scaffold420G51310 Striga asiatica
SGA_v2.0_scaffold420G51340 Striga asiatica
SGA_v2.0_scaffold420G51422 Striga asiatica
SGA_v2.0_scaffold479G52276 Striga asiatica
SGA_v2.0_scaffold507G52551 Striga asiatica
SGA_v2.0_scaffold601G53131 Striga asiatica
SGA_v2.0_scaffold913G53724 Striga asiatica
SHI01506 Sapria himalayana
SHI02522 Sapria himalayana
SHI04800 Sapria himalayana
SHI34651 Sapria himalayana
SHI41394 Sapria himalayana
Solyc00g142160.1 Solanum lycopersicum
Solyc00g142170.2 Solanum lycopersicum
Solyc00g500104.1 Solanum lycopersicum
Solyc00g500181.1 Solanum lycopersicum
Solyc00g500227.1 Solanum lycopersicum
Solyc00g500255.1 Solanum lycopersicum
Solyc00g500263.1 Solanum lycopersicum
Solyc00g500350.1 Solanum lycopersicum
Solyc03g063460.1 Solanum lycopersicum
Solyc03g063470.1 Solanum lycopersicum
Solyc07g008830.1 Solanum lycopersicum
Solyc09g056110.1 Solanum lycopersicum
Solyc09g056290.3 Solanum lycopersicum
Solyc10g047100.1 Solanum lycopersicum
Solyc11g030850.1 Solanum lycopersicum
Solyc11g030860.3 Solanum lycopersicum
Solyc11g030920.1 Solanum lycopersicum
Solyc11g056290.3 Solanum lycopersicum
Solyc11g063530.2 Solanum lycopersicum
Solyc11g063540.2 Solanum lycopersicum
Sopen00g006790 Solanum pennellii
Sopen05g012620 Solanum pennellii
Sopen05g012700 Solanum pennellii
Sopen11g012750 Solanum pennellii
Sopen11g018230 Solanum pennellii
TAR371G0124 Trochodendron aralioides
TAR623G1007 Trochodendron aralioides
TAR626G0574 Trochodendron aralioides
Thhalv10003100m.g Eutrema salsugineum
TPR.G40534 Trifolium pratense
unitig_87.g28008 Utricularia gibba
unitig_87.g28033 Utricularia gibba

User provided reference genes

Program Settings