Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35210 Brassica napus
A04p13870 Brassica napus
A06p41380 Brassica napus
A09p03310 Brassica napus
Aa31LG2G5250 Aethionema arabicum
Aa31LG9G840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.947 Anthoceros agrestis
Actinidia05926 Actinidia chinensis
Actinidia05927 Actinidia chinensis
Actinidia26673 Actinidia chinensis
Actinidia26674 Actinidia chinensis
Actinidia36178 Actinidia chinensis
Ah.02g112730 Amaranthus hybridus
Ah.11g046070 Amaranthus hybridus
AL5G16410 Arabidopsis lyrata
AL7G48910 Arabidopsis lyrata
Aqoxy5G00586 Aquilegia oxysepala
Aqoxy5G03510 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.77WSFP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3AN3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JMNW81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM7ZHT Arachis hypogaea
AT3G27240 Arabidopsis thaliana
AT5G40810 Arabidopsis thaliana
ATR0681G210 Amborella trichopoda
ATR0736G063 Amborella trichopoda
Atru.chr6.2505 Acer truncatum
AUR62008267 Chenopodium quinoa
AUR62011576 Chenopodium quinoa
AUR62016392 Chenopodium quinoa
AUR62031027 Chenopodium quinoa
BcaB04g19429 Brassica carinata
BcaB06g27561 Brassica carinata
BcaB07g30178 Brassica carinata
BcaC03g17441 Brassica carinata
BcaC04g23920 Brassica carinata
BcaC06g30999 Brassica carinata
BcaC06g33840 Brassica carinata
BolC2t11455H Brassica oleracea
BolC4t26364H Brassica oleracea
BolC7t44142H Brassica oleracea
BolC9t53272H Brassica oleracea
BraA02t08527Z Brassica rapa
BraA04t17052Z Brassica rapa
BraA06t27063Z Brassica rapa
BraA09t35969Z Brassica rapa
C02p53880 Brassica napus
C02p53900 Brassica napus
C04p47630 Brassica napus
C07p36290 Brassica napus
C09p03510 Brassica napus
CAN.G395.40 Capsicum annuum
CAN.G473.75 Capsicum annuum
CANSAT35G1532 Cannabis sativa
CARHR148500 Cardamine hirsuta
CARHR213700 Cardamine hirsuta
Carub.0005s0549 Capsella rubella
Carub.0007s3468 Capsella rubella
Ca_04414_v3 Cicer arietinum L.
Ca_04415_v3 Cicer arietinum L.
CBR_g29835 Chara braunii
CBR_g70554 Chara braunii
CBR_g70555 Chara braunii
Cc04_g15830 Coffea canephora
CDE01G0318 Ceratophyllum demersum
CDE02G3616 Ceratophyllum demersum
CDE08G0598 Ceratophyllum demersum
Cfa007260 Carpinus fangiana
Cfa026708 Carpinus fangiana
Ciclev10023388m.g Citrus clementina
Ciclev10026079m.g Citrus clementina
CiPaw.03G051800 Carya illinoinensis
CiPaw.04G034300 Carya illinoinensis
ClCG10G007870 Citrullus lanatus
COL.COLO4_08770 Corchorus olitorius
COL.COLO4_12876 Corchorus olitorius
Cpa.g.sc130.13 Carica papaya
Cre15.g638500 Chlamydomonas reinhardtii
CsaV3_3G006950 Cucumis sativus L.
CSS0000823 Camellia sinensis var. sinensis
CSS0002340 Camellia sinensis var. sinensis
CSS0014018 Camellia sinensis var. sinensis
CSS0019196 Camellia sinensis var. sinensis
CSS0032616 Camellia sinensis var. sinensis
CSS0034285 Camellia sinensis var. sinensis
CSS0041183 Camellia sinensis var. sinensis
CSS0044186 Camellia sinensis var. sinensis
DCAR_001595 Daucus carota
DCAR_011303 Daucus carota
Dinv32907 Davidia involucrata
Dinv34778 Davidia involucrata
Dinv38090 Davidia involucrata
Duzib147G0518 Durio zibethinus
Duzib187G0527 Durio zibethinus
Duzib264G0246 Durio zibethinus
Duzib264G0331 Durio zibethinus
ECA232G3296 Erigeron canadensis
ECA238G0026 Erigeron canadensis
EL10Ac5g10810 Beta vulgaris
Eucgr.I01668 Eucalyptus grandis
Eucgr.J02305 Eucalyptus grandis
Eucgr.J02306 Eucalyptus grandis
FAN02G3977 Fragaria x ananassa
FAN05G2351 Fragaria x ananassa
FAN09G0923 Fragaria x ananassa
FAN14G1044 Fragaria x ananassa
FvH4_6g52970 Fragaria vesca
Glyma.05G074400 Glycine max
Glyma.16G062100 Glycine max
Glyma.19G076400 Glycine max
Glyma.19G084900 Glycine max
Gohir.A01G185740 Gossypium hirsutum
Gohir.A09G033900 Gossypium hirsutum
Gohir.A09G084800 Gossypium hirsutum
Gohir.D09G034900 Gossypium hirsutum
Gohir.D09G084700 Gossypium hirsutum
Gohir.D10G084742 Gossypium hirsutum
Gorai.006G039700 Gossypium raimondii
Gorai.006G100700 Gossypium raimondii
Gorai.011G092500 Gossypium raimondii
GSVIVG01001830001 Vitis vinifera
GSVIVG01017236001 Vitis vinifera
HanXRQChr07g0198321 Helianthus annuus
HanXRQChr09g0255971 Helianthus annuus
HanXRQChr14g0450921 Helianthus annuus
HanXRQChr15g0486881 Helianthus annuus
HanXRQChr16g0500631 Helianthus annuus
Haze_14828 Corylus avellana
Haze_26256 Corylus avellana
Hma1.2p1_0279F.1_g112390 Hydrangea macrophylla
Hma1.2p1_1219F.1_g267830 Hydrangea macrophylla
HPP92_025832 Vanilla planifolia
Hund00560 Selenicereus undatus
Hund02717 Selenicereus undatus
Lalb_Chr02g0157871 Lupinus albus
Lalb_Chr06g0174341 Lupinus albus
Lalb_Chr06g0174351 Lupinus albus
Lalb_Chr14g0363121 Lupinus albus
Lalb_Chr21g0317561 Lupinus albus
Lalb_Chr24g0403381 Lupinus albus
Lj2g0014909 Lotus japonicus
Lj5g0026906 Lotus japonicus
Lj7A607G34 Lonicera japonica
Lj7A607T33 Lonicera japonica
Lj9C503G6 Lonicera japonica
Lsat_1_v5_gn_2_93861 Lactuca sativa
Lsat_1_v5_gn_2_93881 Lactuca sativa
Lsat_1_v5_gn_2_93901 Lactuca sativa
Lsat_1_v5_gn_4_104600 Lactuca sativa
Manes.15G157600 Manihot esculenta
Manes.17G106401 Manihot esculenta
Mapoly0186s0018 Marchantia polymorpha
MBI07_g12930_MAGBIO Magnolia biondii
MCO05G461 Micromonas commoda
MD09G1015600 Malus domestica
MD17G1016000 Malus domestica
Medtr6g023230 Medicago truncatula
Medtr6g023270 Medicago truncatula
Medtr6g023280 Medicago truncatula
Medtr6g023290 Medicago truncatula
MELO3C014960.2 Cucumis melo
Migut.D01049 Erythranthe guttata
Migut.H00016 Erythranthe guttata
Migut.K01443 Erythranthe guttata
MSTRG.11110 Avicennia marina
MSTRG.24078 Avicennia marina
MSTRG.3096 Avicennia marina
MSTRG.9439 Avicennia marina
Nitab4.5_0000620g0110 Nicotiana tabacum
Nitab4.5_0002887g0150 Nicotiana tabacum
Nitab4.5_0003011g0070 Nicotiana tabacum
Nitab4.5_0003512g0030 Nicotiana tabacum
Nitab4.5_0006854g0070 Nicotiana tabacum
Nn3g21562 Nelumbo nucifera
Nn4g25741 Nelumbo nucifera
Nn7g37519 Nelumbo nucifera
Oeu033392.1 Olea europaea
Oeu052299.1 Olea europaea
Os01g0935700 Oryza sativa ssp. japonica
Os05g0301700 Oryza sativa ssp. japonica
Peaxi162Scf00166g00725 Petunia axillaris
Peaxi162Scf00207g00746 Petunia axillaris
Peaxi162Scf00420g00452 Petunia axillaris
PGR102G0125 Punica granatum
PGR142G0647 Punica granatum
PGSC0003DMG400020224 Solanum tuberosum
PGSC0003DMG400028516 Solanum tuberosum
PGSC0003DMG400028642 Solanum tuberosum
Phvul.004G056300 Phaseolus vulgaris
Phvul.008G150200 Phaseolus vulgaris
Potri.004G203800 Populus trichocarpa
Potri.009G165000 Populus trichocarpa
Pp3c11_10550 Physcomitrium patens
Pp3c11_10650 Physcomitrium patens
Pp3c11_17890 Physcomitrium patens
Pp3c7_16670 Physcomitrium patens
PRCOL_00002544 Prasinoderma coloniale
Prupe.3G301700 Prunus persica
Psat1g084640 Pisum sativum
Psat1g084720 Pisum sativum
Psat5g156760 Pisum sativum
Psat5g208320 Pisum sativum
Psat5g211040 Pisum sativum
PSO063G3460 Papaver somniferum
PSO210G0853 Papaver somniferum
PSO782G1198 Papaver somniferum
PSO832G1460 Papaver somniferum
QL02p072654 Quercus lobata
RcHm_v2.0_Chr2g0174681 Rosa chinensis
Rhsim08G0045400 Rhododendron simsii
Rhsim08G0216900 Rhododendron simsii
Rhsim08G0217000 Rhododendron simsii
Rhsim10G0009700 Rhododendron simsii
Rhsim12G0184100 Rhododendron simsii
Sabra04G0137800 Salix brachista
Sabra09G0129000 Salix brachista
SalBow2G0305 Salvia bowleyana
SalBow2G3521 Salvia bowleyana
SalBow7G0587 Salvia bowleyana
Sc09g0003630 Simmondsia chinensis
Sed0006135 Sechium edule
Sed0025997 Sechium edule
SEGI_24680 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14793 Striga asiatica
SGA_v2.0_scaffold47G17563 Striga asiatica
SGA_v2.0_scaffold5G02652 Striga asiatica
SMO203G0258 Selaginella moellendorffii
Solyc02g093900.3 Solanum lycopersicum
Solyc06g067920.3 Solanum lycopersicum
Solyc12g042920.2 Solanum lycopersicum
Sopen02g038550 Solanum pennellii
Sopen06g025200 Solanum pennellii
Sopen12g022100 Solanum pennellii
Sp2g16370 Schrenkiella parvula
Sp7g01100 Schrenkiella parvula
TAR371G0309 Trochodendron aralioides
THA.LOC104805337 Tarenaya hassleriana
THA.LOC104823974 Tarenaya hassleriana
THA.LOC104825301 Tarenaya hassleriana
Thecc.04G029400 Theobroma cacao
Thecc.06G074800 Theobroma cacao
Thhalv10004628m.g Eutrema salsugineum
Thhalv10027856m.g Eutrema salsugineum
TPR.G27478 Trifolium pratense
TWI12G0969 Tripterygium wilfordii
TWI18G0958 Tripterygium wilfordii
TWI38G0012 Tripterygium wilfordii
TWI38G1214 Tripterygium wilfordii
TWI75G1827 Tripterygium wilfordii
unitig_52.g17649 Utricularia gibba
unitig_62.g23363 Utricularia gibba
vmacro05934 Vaccinium macrocarpon
vmacro18323 Vaccinium macrocarpon
vmacro18955 Vaccinium macrocarpon
VMungo0464G0342 Vigna mungo
VMungo1383G3434 Vigna mungo
Zm00001eb039620 Zea mays
Zm00001eb176210 Zea mays

User provided reference genes

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