Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12970 Brassica napus
A03p07920 Brassica napus
A05p44190 Brassica napus
A08p20400 Brassica napus
A08p20430 Brassica napus
A10p22490 Brassica napus
Aa31LG11G12900 Aethionema arabicum
Aa31LG2G2210 Aethionema arabicum
Aa31LG5G13430 Aethionema arabicum
Actinidia08759 Actinidia chinensis
Actinidia28410 Actinidia chinensis
Actinidia28411 Actinidia chinensis
Actinidia28412 Actinidia chinensis
Actinidia34325 Actinidia chinensis
Ah.08g218170 Amaranthus hybridus
AL2G19630 Arabidopsis lyrata
AL3G12390 Arabidopsis lyrata
AL6G27740 Arabidopsis lyrata
AL7G25140 Arabidopsis lyrata
Aqoxy3G02354 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0CRJ7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.51ZP46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6I6CSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9YASY Arachis hypogaea
AT1G65010 Arabidopsis thaliana
AT3G02930 Arabidopsis thaliana
AT4G27595 Arabidopsis thaliana
AT5G16730 Arabidopsis thaliana
ATR0559G153 Amborella trichopoda
ATR0665G660 Amborella trichopoda
ATR0684G198 Amborella trichopoda
Atru.chr12.1915 Acer truncatum
AUR62027711 Chenopodium quinoa
AUR62039465 Chenopodium quinoa
BcaB01g00591 Brassica carinata
BcaB01g05252 Brassica carinata
BcaB01g06404 Brassica carinata
BcaB03g12538 Brassica carinata
BcaB03g13772 Brassica carinata
BcaB03g16553 Brassica carinata
BcaB04g17493 Brassica carinata
BcaB04g21395 Brassica carinata
BcaB05g25318 Brassica carinata
BcaC01g03093 Brassica carinata
BcaC04g18855 Brassica carinata
BcaC05g30495 Brassica carinata
BcaC07g38287 Brassica carinata
BcaC09g50577 Brassica carinata
BcaNung01656 Brassica carinata
BcaNung03548 Brassica carinata
BNapus_Darmor_BZH_scaffold_129p00150 Brassica napus
BolC1t05862H Brassica oleracea
BolC2t07707H Brassica oleracea
BolC2t08249H Brassica oleracea
BolC3t13410H Brassica oleracea
BolC3t17896H Brassica oleracea
BolC5t35053H Brassica oleracea
BolC6t35668H Brassica oleracea
BolC8t48714H Brassica oleracea
BolC9t58867H Brassica oleracea
BraA01t04605Z Brassica rapa
BraA02t06353Z Brassica rapa
BraA03t10117Z Brassica rapa
BraA06t23277Z Brassica rapa
BraA06t25819Z Brassica rapa
BraA08t33998Z Brassica rapa
BraA10t44308Z Brassica rapa
C02p21090 Brassica napus
C03p09130 Brassica napus
C03p56090 Brassica napus
C06p05610 Brassica napus
C08p10330 Brassica napus
C09p60340 Brassica napus
C09p76040 Brassica napus
CAN.G1131.29 Capsicum annuum
CAN.G333.7 Capsicum annuum
CAN.G631.31 Capsicum annuum
CAN.G65.127 Capsicum annuum
CARHR056460 Cardamine hirsuta
CARHR076960 Cardamine hirsuta
CARHR196450 Cardamine hirsuta
Carub.0002s1018 Capsella rubella
Carub.0003s0206 Capsella rubella
Carub.0006s1495 Capsella rubella
Carub.0007s1326 Capsella rubella
Ca_23433_v3 Cicer arietinum L.
Ca_23620_v3 Cicer arietinum L.
Ca_24433_v3 Cicer arietinum L.
Ca_25405_v3 Cicer arietinum L.
Ca_27636_v3 Cicer arietinum L.
Ca_30783_v3 Cicer arietinum L.
Cc01_g00970 Coffea canephora
CDE03G0435 Ceratophyllum demersum
CDE03G0449 Ceratophyllum demersum
CDE06G2095 Ceratophyllum demersum
CDE06G2427 Ceratophyllum demersum
CDE10G1056 Ceratophyllum demersum
CDE12G0025 Ceratophyllum demersum
Cfa016065 Carpinus fangiana
Ciclev10030659m.g Citrus clementina
CiPaw.05G214700 Carya illinoinensis
CiPaw.06G035300 Carya illinoinensis
ClCG09G017190 Citrullus lanatus
COL.COLO4_15190 Corchorus olitorius
Cpa.g.sc43.107 Carica papaya
CsaV3_2G036640 Cucumis sativus L.
CSS0006811 Camellia sinensis var. sinensis
CSS0013936 Camellia sinensis var. sinensis
CSS0037437 Camellia sinensis var. sinensis
CSS0045858 Camellia sinensis var. sinensis
DCAR_009021 Daucus carota
DCAR_015728 Daucus carota
DCAR_020422 Daucus carota
DCAR_029310 Daucus carota
DCAR_029759 Daucus carota
DCAR_029760 Daucus carota
DCAR_029761 Daucus carota
DCAR_029763 Daucus carota
DCAR_029764 Daucus carota
Dinv17247 Davidia involucrata
Dinv29136 Davidia involucrata
Duzib106G0276 Durio zibethinus
Duzib128G0190 Durio zibethinus
Duzib177G1021 Durio zibethinus
ECA232G4815 Erigeron canadensis
EL10Ac8g20570 Beta vulgaris
Eucgr.A02985 Eucalyptus grandis
FAN01G0952 Fragaria x ananassa
FAN03G3506 Fragaria x ananassa
FAN10G3406 Fragaria x ananassa
FvH4_6g34291 Fragaria vesca
FvH4_7g34141 Fragaria vesca
Glyma.01G233600 Glycine max
Glyma.11G009200 Glycine max
Glyma.11G108500 Glycine max
Glyma.12G016900 Glycine max
Gohir.A02G127400 Gossypium hirsutum
Gohir.A08G221658 Gossypium hirsutum
Gohir.A11G303100 Gossypium hirsutum
Gohir.D03G053600 Gossypium hirsutum
Gohir.D08G241100 Gossypium hirsutum
Gohir.D11G318400 Gossypium hirsutum
Gorai.003G055800 Gossypium raimondii
Gorai.004G256500 Gossypium raimondii
Gorai.007G348400 Gossypium raimondii
GSVIVG01024346001 Vitis vinifera
HanXRQChr16g0512141 Helianthus annuus
Haze_00384 Corylus avellana
Hma1.2p1_0649F.1_g195230 Hydrangea macrophylla
HPP92_020910 Vanilla planifolia
Hund21160 Selenicereus undatus
Lalb_Chr01g0000851 Lupinus albus
Lalb_Chr05g0211221 Lupinus albus
Lalb_Chr09g0320111 Lupinus albus
Lalb_Chr16g0376551 Lupinus albus
Lalb_Chr19g0140011 Lupinus albus
Lj3A885T45 Lonicera japonica
Lj3g0004765 Lotus japonicus
LjContig00222g0028031 Lotus japonicus
Lsat_1_v5_gn_6_57521 Lactuca sativa
Lsat_1_v5_gn_9_47741 Lactuca sativa
Manes.08G064501 Manihot esculenta
Manes.09G128400 Manihot esculenta
MBI04_g41611_MAGBIO Magnolia biondii
MBI05_g37760_MAGBIO Magnolia biondii
MD01G1237800 Malus domestica
MD01G1238300 Malus domestica
Medtr4g478190 Medicago truncatula
Medtr5g007350 Medicago truncatula
MELO3C021858.2 Cucumis melo
Migut.F00080 Erythranthe guttata
Migut.F00081 Erythranthe guttata
Migut.F00936 Erythranthe guttata
MSTRG.7 Avicennia marina
Nitab4.5_0000021g0730 Nicotiana tabacum
Nitab4.5_0000115g0370 Nicotiana tabacum
Nitab4.5_0002998g0040 Nicotiana tabacum
Nitab4.5_0004530g0080 Nicotiana tabacum
Nn1g05150 Nelumbo nucifera
Nn5g29452 Nelumbo nucifera
Nn5g30016 Nelumbo nucifera
Oeu007519.1 Olea europaea
Oeu011573.1 Olea europaea
Oeu027888.1 Olea europaea
Oeu038085.1 Olea europaea
Os02g0439200 Oryza sativa ssp. japonica
Os04g0592400 Oryza sativa ssp. japonica
Os05g0119700 Oryza sativa ssp. japonica
Os10g0577100 Oryza sativa ssp. japonica
Peaxi162Scf00133g00055 Petunia axillaris
Peaxi162Scf00516g00642 Petunia axillaris
Peaxi162Scf00815g00358 Petunia axillaris
PGR042G1453 Punica granatum
PGSC0003DMG400003163 Solanum tuberosum
PGSC0003DMG400027037 Solanum tuberosum
Phvul.002G041100 Phaseolus vulgaris
Phvul.011G019100 Phaseolus vulgaris
Potri.013G079000 Populus trichocarpa
Potri.019G047600 Populus trichocarpa
Prupe.2G328200 Prunus persica
Psat2g144480 Pisum sativum
Psat2g189280 Pisum sativum
PSO063G0986 Papaver somniferum
PSO782G1876 Papaver somniferum
QL09p021240 Quercus lobata
RcHm_v2.0_Chr1g0384501 Rosa chinensis
RcHm_v2.0_Chr6g0286801 Rosa chinensis
Rhsim03G0223300 Rhododendron simsii
Sabra13G0073700 Salix brachista
Sabra19G0059600 Salix brachista
SalBow2G3352 Salvia bowleyana
SalBow4G0313 Salvia bowleyana
SalBow4G0550 Salvia bowleyana
Sc05g0006950 Simmondsia chinensis
Sc17g0005660 Simmondsia chinensis
Sed0014338 Sechium edule
Sed0022201 Sechium edule
SEGI_16314 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18450 Striga asiatica
Solyc03g097190.3 Solanum lycopersicum
Solyc06g072730.4 Solanum lycopersicum
Sopen03g027950 Solanum pennellii
Sopen06g029110 Solanum pennellii
Sp3g01990 Schrenkiella parvula
Sp5g19380 Schrenkiella parvula
Sp6g27420 Schrenkiella parvula
Sp7g25540 Schrenkiella parvula
TAR374G0884 Trochodendron aralioides
TAR375G0807 Trochodendron aralioides
TAR375G0862 Trochodendron aralioides
THA.LOC104805713 Tarenaya hassleriana
THA.LOC104820899 Tarenaya hassleriana
THA.LOC104821726 Tarenaya hassleriana
THA.LOC104824563 Tarenaya hassleriana
THA.LOC104827197 Tarenaya hassleriana
THA.LOC109117075 Tarenaya hassleriana
Thecc.05G219100 Theobroma cacao
Thhalv10012674m.g Eutrema salsugineum
Thhalv10020078m.g Eutrema salsugineum
Thhalv10022460m.g Eutrema salsugineum
Thhalv10024236m.g Eutrema salsugineum
TPR.G19616 Trifolium pratense
TPR.G38027 Trifolium pratense
TWI34G0829 Tripterygium wilfordii
TWI60G0601 Tripterygium wilfordii
unitig_90.g27540 Utricularia gibba
vmacro06532 Vaccinium macrocarpon
VMungo1127G0287 Vigna mungo
VMungo1215G0687 Vigna mungo
Zm00001eb024900 Zea mays
Zm00001eb024910 Zea mays
Zm00001eb028470 Zea mays
Zm00001eb072310 Zea mays
Zm00001eb072330 Zea mays
Zm00001eb224910 Zea mays
Zm00001eb230640 Zea mays
Zm00001eb230650 Zea mays
Zm00001eb429900 Zea mays

User provided reference genes

Program Settings