Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06080 Brassica napus
A01p31100 Brassica napus
A03p61320 Brassica napus
A07p08310 Brassica napus
Aa31LG2G9730 Aethionema arabicum
Actinidia13233 Actinidia chinensis
Actinidia21967 Actinidia chinensis
Actinidia22343 Actinidia chinensis
Actinidia26382 Actinidia chinensis
Actinidia38734 Actinidia chinensis
Actinidia40490 Actinidia chinensis
Ah.09g225150 Amaranthus hybridus
Ah.10g035900 Amaranthus hybridus
Ah.14g079770 Amaranthus hybridus
Ah.16g104400 Amaranthus hybridus
AL3G39110 Arabidopsis lyrata
AL7G19540 Arabidopsis lyrata
Aqoxy1G03858 Aquilegia oxysepala
Aqoxy1G03860 Aquilegia oxysepala
Aqoxy7G02269_Aqoxy7G02270 Aquilegia oxysepala
Aqoxy7G03209 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3K6C5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7QY6I1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DW9T57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LD5RUW Arachis hypogaea
AT3G24150 Arabidopsis thaliana
AT4G32295 Arabidopsis thaliana
ATR1120G001 Amborella trichopoda
Atru.chr7.1120 Acer truncatum
Atru.chr7.2429 Acer truncatum
Atru.chr7.2430 Acer truncatum
AUR62011156 Chenopodium quinoa
AUR62012399 Chenopodium quinoa
AUR62013331 Chenopodium quinoa
AUR62031506 Chenopodium quinoa
BcaB03g12740 Brassica carinata
BcaB04g20404 Brassica carinata
BcaB06g26575 Brassica carinata
BcaC06g35611 Brassica carinata
BcaC09g52012 Brassica carinata
BcaNung03582 Brassica carinata
BcaNung05977 Brassica carinata
BolC1t00662H Brassica oleracea
BolC1t03916H Brassica oleracea
BolC7t41787H Brassica oleracea
BolC7t46365H Brassica oleracea
BraA01t00571Z Brassica rapa
BraA01t03234Z Brassica rapa
BraA03t15176Z Brassica rapa
BraA07t28614Z Brassica rapa
C01p06690 Brassica napus
C01p39640 Brassica napus
C07p12970 Brassica napus
C07p59170 Brassica napus
CAN.G610.51 Capsicum annuum
CANSAT11G0052 Cannabis sativa
CANSAT25G0322 Cannabis sativa
CARHR100050 Cardamine hirsuta
CARHR240200 Cardamine hirsuta
Carub.0003s2435 Capsella rubella
Carub.0007s0828 Capsella rubella
Ca_06929_v3 Cicer arietinum L.
CBR_g26384 Chara braunii
CBR_g8879 Chara braunii
Cc06_g08230 Coffea canephora
Cc08_g00600 Coffea canephora
CDE02G2480 Ceratophyllum demersum
CDE04G2115 Ceratophyllum demersum
CDE07G0745 Ceratophyllum demersum
Cfa003403 Carpinus fangiana
Cfa013143 Carpinus fangiana
Ciclev10008357m.g Citrus clementina
Ciclev10008661m.g Citrus clementina
CiPaw.03G246700 Carya illinoinensis
CiPaw.04G173500 Carya illinoinensis
CiPaw.08G011100 Carya illinoinensis
ClCG05G016870 Citrullus lanatus
ClCG08G013390 Citrullus lanatus
ClCG11G003210 Citrullus lanatus
COL.COLO4_18861 Corchorus olitorius
COL.COLO4_35120 Corchorus olitorius
Cpa.g.sc46.22 Carica papaya
Cpa.g.sc954.3 Carica papaya
CsaV3_2G003030 Cucumis sativus L.
CsaV3_2G032130 Cucumis sativus L.
CsaV3_3G046400 Cucumis sativus L.
CSS0023898 Camellia sinensis var. sinensis
CSS0024589 Camellia sinensis var. sinensis
CSS0025969 Camellia sinensis var. sinensis
CSS0026009 Camellia sinensis var. sinensis
CSS0039697 Camellia sinensis var. sinensis
CSS0045754 Camellia sinensis var. sinensis
DCAR_001510 Daucus carota
DCAR_017800 Daucus carota
Dinv08646 Davidia involucrata
Dinv30134 Davidia involucrata
Dinv36497 Davidia involucrata
Dinv41490 Davidia involucrata
Duzib150G1228 Durio zibethinus
Duzib168G0368 Durio zibethinus
Duzib168G1415 Durio zibethinus
Duzib187G1449 Durio zibethinus
Duzib187G1667 Durio zibethinus
ECA234G3880 Erigeron canadensis
ECA246G1383 Erigeron canadensis
EL10Ac2g04233 Beta vulgaris
EL10Ac8g18693 Beta vulgaris
Eucgr.C02771 Eucalyptus grandis
Eucgr.C04258 Eucalyptus grandis
FAN15G3098 Fragaria x ananassa
FAN19G1540 Fragaria x ananassa
FAN20G1883 Fragaria x ananassa
FAN23G0217 Fragaria x ananassa
FAN23G0328 Fragaria x ananassa
FAN24G0990 Fragaria x ananassa
FAN26G1811 Fragaria x ananassa
FAN27G0660 Fragaria x ananassa
FAN28G1386 Fragaria x ananassa
FvH4_1g02850 Fragaria vesca
FvH4_2g29010 Fragaria vesca
Glyma.04G066500 Glycine max
Glyma.06G067900 Glycine max
Glyma.06G220900 Glycine max
Glyma.13G158300 Glycine max
Glyma.17G112800 Glycine max
Gohir.A05G053700 Gossypium hirsutum
Gohir.A06G054500 Gossypium hirsutum
Gohir.A06G098300 Gossypium hirsutum
Gohir.A07G028300 Gossypium hirsutum
Gohir.A13G200401 Gossypium hirsutum
Gohir.D05G057300 Gossypium hirsutum
Gohir.D06G053400 Gossypium hirsutum
Gohir.D06G100366 Gossypium hirsutum
Gohir.D07G032400 Gossypium hirsutum
Gohir.D07G032450 Gossypium hirsutum
Gohir.D13G206000 Gossypium hirsutum
Gorai.001G033800 Gossypium raimondii
Gorai.009G058400 Gossypium raimondii
Gorai.010G062400 Gossypium raimondii
Gorai.010G115300 Gossypium raimondii
Gorai.013G234600 Gossypium raimondii
Gorai.013G234700 Gossypium raimondii
GSVIVG01015558001 Vitis vinifera
GSVIVG01035861001 Vitis vinifera
HanXRQChr04g0096651 Helianthus annuus
HanXRQChr10g0288571 Helianthus annuus
HanXRQChr10g0315701 Helianthus annuus
HanXRQChr12g0356701 Helianthus annuus
Haze_21516 Corylus avellana
Haze_25545 Corylus avellana
Hma1.2p1_0007F.1_g005330 Hydrangea macrophylla
Hma1.2p1_0018F.1_g012200 Hydrangea macrophylla
Hma1.2p1_0036F.1_g022910 Hydrangea macrophylla
Hma1.2p1_0626F.1_g191610 Hydrangea macrophylla
HPP92_008171 Vanilla planifolia
Hund09268 Selenicereus undatus
Hund26525 Selenicereus undatus
Lalb_Chr07g0179101 Lupinus albus
Lalb_Chr12g0198041 Lupinus albus
Lalb_Chr13g0301711 Lupinus albus
Lj3C846T11 Lonicera japonica
Lj4g0026849 Lotus japonicus
Lj7P723T25 Lonicera japonica
Lsat_1_v5_gn_5_29640 Lactuca sativa
Lsat_1_v5_gn_5_96401 Lactuca sativa
Lsat_1_v5_gn_8_62201 Lactuca sativa
Manes.03G014300 Manihot esculenta
Manes.03G014400 Manihot esculenta
Manes.06G056300 Manihot esculenta
Manes.16G122300 Manihot esculenta
MBI01_g20903_MAGBIO Magnolia biondii
MBI04_g29337_MAGBIO Magnolia biondii
MD00G1144400 Malus domestica
MD02G1028200 Malus domestica
MD15G1169900 Malus domestica
Medtr4g114900 Medicago truncatula
MELO3C003699.2 Cucumis melo
MELO3C004457.2 Cucumis melo
MELO3C011264.2 Cucumis melo
MELO3C011266.2 Cucumis melo
Migut.A00041 Erythranthe guttata
Migut.J01220 Erythranthe guttata
MSTRG.11614 Avicennia marina
MSTRG.26007 Avicennia marina
MSTRG.6071 Avicennia marina
Nitab4.5_0000028g0130 Nicotiana tabacum
Nitab4.5_0000209g0240 Nicotiana tabacum
Nitab4.5_0005540g0010 Nicotiana tabacum
Nitab4.5_0011210g0010 Nicotiana tabacum
Nn8g39493 Nelumbo nucifera
Oeu012611.1 Olea europaea
Oeu029171.1 Olea europaea
Oeu031009.1 Olea europaea
Peaxi162Scf00870g00021 Petunia axillaris
Peaxi162Scf00891g00127 Petunia axillaris
PGR044G1682 Punica granatum
PGR102G3228 Punica granatum
PGR142G3561 Punica granatum
PGSC0003DMG400030900 Solanum tuberosum
PGSC0003DMG400032780 Solanum tuberosum
Phvul.003G166900 Phaseolus vulgaris
Phvul.009G092700 Phaseolus vulgaris
Phvul.009G205400 Phaseolus vulgaris
Potri.006G067100 Populus trichocarpa
Potri.006G254700 Populus trichocarpa
Potri.018G027100 Populus trichocarpa
Potri.018G128700 Populus trichocarpa
Prupe.1G481300 Prunus persica
Prupe.7G246600 Prunus persica
Psat4g037120 Pisum sativum
PSO017G0463 Papaver somniferum
PSO170G1980 Papaver somniferum
QL02p021642 Quercus lobata
QL02p089426 Quercus lobata
RcHm_v2.0_Chr1g0374351 Rosa chinensis
RcHm_v2.0_Chr2g0087961 Rosa chinensis
RcHm_v2.0_Chr6g0297891 Rosa chinensis
Rhsim03G0249800 Rhododendron simsii
Sabra06G0049900 Salix brachista
Sabra06G0199000 Salix brachista
Sabra18G0109400 Salix brachista
SalBow4G0028 Salvia bowleyana
SalBow6G2911 Salvia bowleyana
Sc08g0006440 Simmondsia chinensis
Sc09g0008240 Simmondsia chinensis
Sed0001806 Sechium edule
Sed0015450 Sechium edule
Sed0020435 Sechium edule
Sed0025027 Sechium edule
SEGI_23892 Sequoiadendron giganteum
SEGI_37106 Sequoiadendron giganteum
SGA_v2.0_scaffold64G21935 Striga asiatica
SMO112G0058 Selaginella moellendorffii
SMO364G0177 Selaginella moellendorffii
Solyc07g008100.4 Solanum lycopersicum
Solyc08g059700.2 Solanum lycopersicum
Sopen07g003970 Solanum pennellii
Sopen08g009520 Solanum pennellii
Sp3g21780 Schrenkiella parvula
Sp7g30060 Schrenkiella parvula
TAR383G0556 Trochodendron aralioides
TAR626G0234 Trochodendron aralioides
TAR626G0447 Trochodendron aralioides
THA.LOC104803655 Tarenaya hassleriana
THA.LOC104808974 Tarenaya hassleriana
THA.LOC104815272 Tarenaya hassleriana
Thecc.09G024600 Theobroma cacao
Thecc.09G129600 Theobroma cacao
Thhalv10002599m.g Eutrema salsugineum
Thhalv10026043m.g Eutrema salsugineum
TPR.G26483 Trifolium pratense
TWI34G0613 Tripterygium wilfordii
TWI63G1496 Tripterygium wilfordii
unitig_748.g7558 Utricularia gibba
vmacro05177 Vaccinium macrocarpon
vmacro06143 Vaccinium macrocarpon
VMungo1215G2417 Vigna mungo
VMungo1309G0489 Vigna mungo
VMungo1309G2155 Vigna mungo

User provided reference genes

Program Settings