Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p18350 Brassica napus
Aa31LG2G17820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.218 Anthoceros agrestis
Actinidia10532 Actinidia chinensis
Actinidia13221 Actinidia chinensis
Actinidia14093 Actinidia chinensis
Actinidia14592 Actinidia chinensis
Actinidia22282 Actinidia chinensis
Actinidia22283 Actinidia chinensis
Actinidia22329 Actinidia chinensis
Actinidia26366 Actinidia chinensis
Actinidia27482 Actinidia chinensis
Actinidia38715 Actinidia chinensis
Ah.10g035750 Amaranthus hybridus
Ah.16g104660 Amaranthus hybridus
Aqoxy7G03305 Aquilegia oxysepala
Aqoxy7G03610 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3L3XV6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5H9XCS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FT4RW0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NP6VZF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE9521 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4C0S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCT00R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RV7I09 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3TJTN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UA6XT5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VX34ZV Arachis hypogaea
AT4G32140 Arabidopsis thaliana
ATR0580G445 Amborella trichopoda
ATR0767G156 Amborella trichopoda
Atru.chr7.1977 Acer truncatum
Atru.chr7.1978 Acer truncatum
Atru.chr7.2466 Acer truncatum
Atru.chr7.2583 Acer truncatum
AUR62012425 Chenopodium quinoa
AUR62031548 Chenopodium quinoa
BcaB03g12731 Brassica carinata
BcaC01g01040 Brassica carinata
BolC3t21059H Brassica oleracea
BraA08t33792Z Brassica rapa
CAN.G273.22 Capsicum annuum
CAN.G68.19 Capsicum annuum
CANSAT25G2143 Cannabis sativa
CARHR240070 Cardamine hirsuta
Carub.0007s0842 Capsella rubella
Ca_13034_v3 Cicer arietinum L.
Cc08_g00420 Coffea canephora
CDE02G2734 Ceratophyllum demersum
CDE04G3102 Ceratophyllum demersum
Cfa002288 Carpinus fangiana
Ciclev10008500m.g Citrus clementina
Ciclev10008607m.g Citrus clementina
Ciclev10027529m.g Citrus clementina
Ciclev10030385m.g Citrus clementina
CiPaw.03G250400 Carya illinoinensis
CiPaw.03G250500 Carya illinoinensis
CiPaw.07G225300 Carya illinoinensis
CiPaw.07G232000 Carya illinoinensis
CiPaw.08G009800 Carya illinoinensis
ClCG00G006030 Citrullus lanatus
ClCG05G016140 Citrullus lanatus
ClCG05G016720 Citrullus lanatus
ClCG06G011680 Citrullus lanatus
ClCG06G011690 Citrullus lanatus
ClCG06G011700 Citrullus lanatus
ClCG06G011710 Citrullus lanatus
ClCG11G003390 Citrullus lanatus
COL.COLO4_15554 Corchorus olitorius
COL.COLO4_18886 Corchorus olitorius
COL.COLO4_18979 Corchorus olitorius
Cpa.g.sc148.41 Carica papaya
Cpa.g.sc187.2 Carica papaya
Cpa.g.sc277.17 Carica papaya
CsaV3_1G027990 Cucumis sativus L.
CsaV3_1G028000 Cucumis sativus L.
CsaV3_1G028010 Cucumis sativus L.
CsaV3_1G028030 Cucumis sativus L.
CsaV3_3G046220 Cucumis sativus L.
CsaV3_4G036410 Cucumis sativus L.
CSS0010162 Camellia sinensis var. sinensis
CSS0018344 Camellia sinensis var. sinensis
CSS0020789 Camellia sinensis var. sinensis
CSS0023578 Camellia sinensis var. sinensis
CSS0032327 Camellia sinensis var. sinensis
CSS0039226 Camellia sinensis var. sinensis
CSS0045276 Camellia sinensis var. sinensis
DCAR_006205 Daucus carota
Dinv01902 Davidia involucrata
Dinv05009 Davidia involucrata
Dinv18199 Davidia involucrata
Dinv24981 Davidia involucrata
Dinv36461 Davidia involucrata
Dinv36462 Davidia involucrata
Duzib150G1176 Durio zibethinus
Duzib168G1253 Durio zibethinus
Duzib168G1703 Durio zibethinus
Duzib168G1959 Durio zibethinus
Duzib187G0119 Durio zibethinus
Duzib187G1479 Durio zibethinus
EL10Ac2g04186 Beta vulgaris
Eucgr.C00580 Eucalyptus grandis
Eucgr.C01883 Eucalyptus grandis
Eucgr.C02755 Eucalyptus grandis
FAN15G2263 Fragaria x ananassa
FAN20G1135 Fragaria x ananassa
FAN24G1461 Fragaria x ananassa
FAN27G0958 Fragaria x ananassa
FAN27G3219 Fragaria x ananassa
FvH4_2g28780 Fragaria vesca
FvH4_2g41280 Fragaria vesca
Glyma.04G065300 Glycine max
Glyma.06G066500 Glycine max
Glyma.14G104002 Glycine max
Glyma.14G114000 Glycine max
Glyma.16G131400 Glycine max
Glyma.17G212400 Glycine max
Glyma.17G222000 Glycine max
Gohir.A05G061300 Gossypium hirsutum
Gohir.A07G029400 Gossypium hirsutum
Gohir.A08G237800 Gossypium hirsutum
Gohir.D05G063801 Gossypium hirsutum
Gohir.D07G033400 Gossypium hirsutum
Gorai.001G035000 Gossypium raimondii
Gorai.009G064500 Gossypium raimondii
GSVIVG01012834001 Vitis vinifera
GSVIVG01035954001 Vitis vinifera
GSVIVG01035993001 Vitis vinifera
HanXRQChr16g0511331 Helianthus annuus
Haze_21490 Corylus avellana
Haze_25468 Corylus avellana
Haze_25472 Corylus avellana
Hma1.2p1_0355F.1_g133960 Hydrangea macrophylla
Hma1.2p1_0355F.1_g133970 Hydrangea macrophylla
Hma1.2p1_1416F.1_g282040 Hydrangea macrophylla
HPP92_000467 Vanilla planifolia
HPP92_000476 Vanilla planifolia
HPP92_000477 Vanilla planifolia
Hund25878 Selenicereus undatus
Lalb_Chr08g0244221 Lupinus albus
Lalb_Chr23g0268441 Lupinus albus
Lj5g0011625 Lotus japonicus
Lj6g0017272 Lotus japonicus
Lj7A726G25 Lonicera japonica
Lj8C454T7 Lonicera japonica
Lj8C481T0 Lonicera japonica
Lsat_1_v5_gn_6_115861 Lactuca sativa
Manes.03G007200 Manihot esculenta
Manes.03G013000 Manihot esculenta
Manes.14G117700 Manihot esculenta
Manes.16G124200 Manihot esculenta
Manes.16G131800 Manihot esculenta
Mapoly0025s0005 Marchantia polymorpha
MBI14_g31384_MAGBIO Magnolia biondii
MBI15_g08205_MAGBIO Magnolia biondii
MD08G1052500 Malus domestica
MD08G1157100 Malus domestica
MD15G1043000 Malus domestica
MD15G1128200 Malus domestica
Medtr1g012790 Medicago truncatula
MELO3C003717.2 Cucumis melo
MELO3C010288.2 Cucumis melo
MELO3C010292.2 Cucumis melo
MELO3C010293.2 Cucumis melo
MELO3C032321.2 Cucumis melo
Migut.A00023 Erythranthe guttata
Migut.A00384 Erythranthe guttata
Migut.E01810 Erythranthe guttata
MSTRG.11603 Avicennia marina
MSTRG.25824 Avicennia marina
Nitab4.5_0000406g0120 Nicotiana tabacum
Nitab4.5_0000406g0130 Nicotiana tabacum
Nitab4.5_0000685g0070 Nicotiana tabacum
Nitab4.5_0006784g0040 Nicotiana tabacum
Nitab4.5_0013916g0010 Nicotiana tabacum
Nn2g12154 Nelumbo nucifera
Nn8g39589 Nelumbo nucifera
Nn8g40099 Nelumbo nucifera
Oeu010898.1 Olea europaea
Oeu024981.1 Olea europaea
Oeu048648.1 Olea europaea
Os04g0645600 Oryza sativa ssp. japonica
Peaxi162Scf00136g00166 Petunia axillaris
Peaxi162Scf00186g00048 Petunia axillaris
Peaxi162Scf01419g00122 Petunia axillaris
PGR044G1172 Punica granatum
PGR142G2044 Punica granatum
PGSC0003DMG400024188 Solanum tuberosum
Phvul.001G042500 Phaseolus vulgaris
Phvul.001G050000 Phaseolus vulgaris
Phvul.009G091400 Phaseolus vulgaris
Potri.006G257000 Populus trichocarpa
Potri.006G266400 Populus trichocarpa
Potri.018G024700 Populus trichocarpa
Pp3c16_22490 Physcomitrium patens
Pp3c25_13320 Physcomitrium patens
Prupe.1G396300 Prunus persica
Prupe.1G483500 Prunus persica
Psat6g027880 Pisum sativum
PSO017G5527 Papaver somniferum
PSO063G4700 Papaver somniferum
PSO170G4811 Papaver somniferum
QL02p018454 Quercus lobata
QL02p021133 Quercus lobata
QL02p090295 Quercus lobata
QL02p090310 Quercus lobata
RcHm_v2.0_Chr6g0297541 Rosa chinensis
RcHm_v2.0_Chr6g0299221 Rosa chinensis
Rhsim02G0203300 Rhododendron simsii
Rhsim02G0217300 Rhododendron simsii
Rhsim03G0252100 Rhododendron simsii
Sabra06G0201200 Salix brachista
Sabra06G0209000 Salix brachista
Sabra18G0027000 Salix brachista
SalBow4G1169 Salvia bowleyana
Sc09g0010760 Simmondsia chinensis
Sc23g0006660 Simmondsia chinensis
Sed0004037 Sechium edule
Sed0006270 Sechium edule
Sed0007912 Sechium edule
Sed0009956 Sechium edule
Sed0013750 Sechium edule
Sed0014838 Sechium edule
Sed0026501 Sechium edule
SEGI_09412 Sequoiadendron giganteum
SEGI_16519 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09102 Striga asiatica
SHI18533 Sapria himalayana
SMO367G0019 Selaginella moellendorffii
Solyc08g021960.3 Solanum lycopersicum
Sopen08g011690 Solanum pennellii
Sp7g29930 Schrenkiella parvula
TAR625G0937 Trochodendron aralioides
TAR625G1278 Trochodendron aralioides
TAR636G2543 Trochodendron aralioides
THA.LOC104803648 Tarenaya hassleriana
Thecc.09G012800 Theobroma cacao
Thecc.09G021600 Theobroma cacao
Thecc.09G130500 Theobroma cacao
Thecc.09G135200 Theobroma cacao
Thhalv10025399m.g Eutrema salsugineum
TPR.G10971 Trifolium pratense
TPR.G13191 Trifolium pratense
TWI32G1260 Tripterygium wilfordii
TWI34G0982 Tripterygium wilfordii
unitig_32.g11114 Utricularia gibba
unitig_32.g11658 Utricularia gibba
unitig_32.g11659 Utricularia gibba
unitig_37.g12214 Utricularia gibba
unitig_37.g12215 Utricularia gibba
unitig_46.g18529 Utricularia gibba
unitig_748.g8180 Utricularia gibba
vmacro05163 Vaccinium macrocarpon
vmacro06160 Vaccinium macrocarpon
vmacro11189 Vaccinium macrocarpon
vmacro11270 Vaccinium macrocarpon
VMungo0647G1518 Vigna mungo
VMungo1309G0731 Vigna mungo
Zm00001eb068600 Zea mays
Zm00001eb432050 Zea mays

User provided reference genes

Program Settings