Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01760 Brassica napus
A01p04330 Brassica napus
A03p62610 Brassica napus
A03p64980 Brassica napus
A08p17120 Brassica napus
Aa31LG2G16520 Aethionema arabicum
Aa31LG6G14070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1247 Anthoceros agrestis
Actinidia12032 Actinidia chinensis
Actinidia17878 Actinidia chinensis
Actinidia27963 Actinidia chinensis
Actinidia36472 Actinidia chinensis
Ah.02g126000 Amaranthus hybridus
Ah.03g145640 Amaranthus hybridus
AL7G13670 Arabidopsis lyrata
AL7G17270 Arabidopsis lyrata
Aqoxy5G01182 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21I7WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40798N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.466BBY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I76K9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6UBQE Arachis hypogaea
AT4G34120 Arabidopsis thaliana
AT4G36910 Arabidopsis thaliana
ATR0724G102 Amborella trichopoda
Atru.chr3.281 Acer truncatum
Atru.chr5.2638 Acer truncatum
AUR62001899 Chenopodium quinoa
AUR62003912 Chenopodium quinoa
BcaB03g11854 Brassica carinata
BcaC01g00930 Brassica carinata
BcaNung02042 Brassica carinata
BcaNung02962 Brassica carinata
BcaNung03361 Brassica carinata
BcaNung03793 Brassica carinata
BolC1t00185H Brassica oleracea
BolC1t00457H Brassica oleracea
BolC3t20896H Brassica oleracea
BolC7t46458H Brassica oleracea
BolC7t46643H Brassica oleracea
BraA01t00168Z Brassica rapa
BraA01t00422Z Brassica rapa
BraA03t15331Z Brassica rapa
BraA03t15557Z Brassica rapa
BraA08t33673Z Brassica rapa
C01p04730 Brassica napus
C03p86080 Brassica napus
C07p60170 Brassica napus
C07p62270 Brassica napus
CAN.G1231.28 Capsicum annuum
CAN.G165.10 Capsicum annuum
CAN.G370.35 Capsicum annuum
CANSAT01G2936 Cannabis sativa
CANSAT25G0616 Cannabis sativa
CARHR242240 Cardamine hirsuta
CARHR242730 Cardamine hirsuta
CARHR245600 Cardamine hirsuta
Carub.0007s0309 Capsella rubella
Carub.0007s0630 Capsella rubella
Ca_18713_v3 Cicer arietinum L.
Ca_18717_v3 Cicer arietinum L.
Ca_24751_v3 Cicer arietinum L.
CBR_g16013 Chara braunii
CBR_g20008 Chara braunii
Cc02_g19060 Coffea canephora
Cc07_g06210 Coffea canephora
CDE01G0438 Ceratophyllum demersum
CDE02G0051 Ceratophyllum demersum
CDE02G0622 Ceratophyllum demersum
CDE02G0920 Ceratophyllum demersum
CDE04G2929 Ceratophyllum demersum
CDE09G1016 Ceratophyllum demersum
Cfa004549 Carpinus fangiana
Cfa014705 Carpinus fangiana
Ciclev10026357m.g Citrus clementina
Ciclev10029198m.g Citrus clementina
CiPaw.03G185200 Carya illinoinensis
CiPaw.04G131300 Carya illinoinensis
CiPaw.05G008600 Carya illinoinensis
ClCG01G012570 Citrullus lanatus
ClCG02G006090 Citrullus lanatus
ClCG05G010170 Citrullus lanatus
COL.COLO4_11453 Corchorus olitorius
COL.COLO4_32625 Corchorus olitorius
Cpa.g.c30463.1 Carica papaya
Cpa.g.sc55.114 Carica papaya
Cre09.g405800 Chlamydomonas reinhardtii
CsaV3_1G014580 Cucumis sativus L.
CsaV3_3G018360 Cucumis sativus L.
CsaV3_7G008450 Cucumis sativus L.
CSS0000427 Camellia sinensis var. sinensis
CSS0003484 Camellia sinensis var. sinensis
DCAR_022007 Daucus carota
Dinv15739 Davidia involucrata
Dinv26846 Davidia involucrata
Dinv30014 Davidia involucrata
Dinv42175 Davidia involucrata
Duzib132G0584 Durio zibethinus
Duzib147G0055 Durio zibethinus
Duzib187G1242 Durio zibethinus
Duzib264G0568 Durio zibethinus
ECA232G2114 Erigeron canadensis
ECA240G4168 Erigeron canadensis
EL10Ac6g15716 Beta vulgaris
Eucgr.H01700 Eucalyptus grandis
Eucgr.H02093 Eucalyptus grandis
Eucgr.I01128 Eucalyptus grandis
FAN15G3599 Fragaria x ananassa
FAN19G2619 Fragaria x ananassa
FAN20G2248 Fragaria x ananassa
FAN23G1997 Fragaria x ananassa
FAN24G1354 Fragaria x ananassa
FAN26G2702 Fragaria x ananassa
FAN27G2082 Fragaria x ananassa
FAN28G0068 Fragaria x ananassa
FvH4_1g16360 Fragaria vesca
FvH4_2g05710 Fragaria vesca
Glyma.01G188500 Glycine max
Glyma.02G104200 Glycine max
Glyma.07G215400 Glycine max
Glyma.11G053700 Glycine max
Gohir.A02G156200 Gossypium hirsutum
Gohir.A03G187600 Gossypium hirsutum
Gohir.A08G083900 Gossypium hirsutum
Gohir.D02G208400 Gossypium hirsutum
Gohir.D03G024450 Gossypium hirsutum
Gorai.003G026000 Gossypium raimondii
Gorai.005G236400 Gossypium raimondii
GSVIVG01022078001 Vitis vinifera
GSVIVG01031707001 Vitis vinifera
HanXRQChr03g0070131 Helianthus annuus
HanXRQChr09g0259871 Helianthus annuus
HanXRQChr15g0490811 Helianthus annuus
Haze_10114 Corylus avellana
Haze_13330 Corylus avellana
Hma1.2p1_0017F.1_g011580 Hydrangea macrophylla
Hma1.2p1_0370F.1_g137570 Hydrangea macrophylla
Hma1.2p1_0670F.1_g200410 Hydrangea macrophylla
HPP92_000198 Vanilla planifolia
HPP92_000231 Vanilla planifolia
Hund13532 Selenicereus undatus
Hund16352 Selenicereus undatus
Lalb_Chr05g0213371 Lupinus albus
Lalb_Chr05g0219341 Lupinus albus
Lalb_Chr09g0323301 Lupinus albus
Lj2g0011856 Lotus japonicus
Lj4g0011527 Lotus japonicus
Lj7A74T39 Lonicera japonica
Lj9A354T43 Lonicera japonica
Lj9A356T48 Lonicera japonica
Lsat_1_v5_gn_3_89881 Lactuca sativa
Lsat_1_v5_gn_4_164600 Lactuca sativa
Lsat_1_v5_gn_9_110721 Lactuca sativa
Manes.12G106600 Manihot esculenta
Manes.13G120500 Manihot esculenta
Mapoly0032s0030 Marchantia polymorpha
MD00G1049800 Malus domestica
MD02G1176100 Malus domestica
MD05G1085200 Malus domestica
MD15G1286500 Malus domestica
Medtr5g016770 Medicago truncatula
MELO3C004761.2 Cucumis melo
MELO3C018463.2 Cucumis melo
MELO3C019527.2 Cucumis melo
Migut.H00412 Erythranthe guttata
Migut.N01176 Erythranthe guttata
MSTRG.23730 Avicennia marina
MSTRG.2868 Avicennia marina
MSTRG.5354 Avicennia marina
Nitab4.5_0000604g0090 Nicotiana tabacum
Nitab4.5_0001220g0030 Nicotiana tabacum
Nitab4.5_0001221g0070 Nicotiana tabacum
Nitab4.5_0001603g0020 Nicotiana tabacum
Nitab4.5_0002003g0030 Nicotiana tabacum
Nitab4.5_0002740g0080 Nicotiana tabacum
Nn1g04776 Nelumbo nucifera
Nn5g30364 Nelumbo nucifera
Oeu001770.1 Olea europaea
Oeu009826.1 Olea europaea
Oeu013731.2 Olea europaea
Oeu044297.2 Olea europaea
Os08g0313200 Oryza sativa ssp. japonica
Os09g0115500 Oryza sativa ssp. japonica
Peaxi162Scf00016g02120 Petunia axillaris
Peaxi162Scf00032g03115 Petunia axillaris
Peaxi162Scf00549g00113 Petunia axillaris
PGR102G3143 Punica granatum
PGR142G0119 Punica granatum
PGSC0003DMG400004027 Solanum tuberosum
PGSC0003DMG400025473 Solanum tuberosum
PGSC0003DMG400025879 Solanum tuberosum
Phvul.002G016800 Phaseolus vulgaris
Phvul.003G047400 Phaseolus vulgaris
Potri.001G303900 Populus trichocarpa
Potri.005G140800 Populus trichocarpa
Potri.007G046400 Populus trichocarpa
Potri.009G099200 Populus trichocarpa
Pp3c14_23570 Physcomitrium patens
Pp3c1_38960 Physcomitrium patens
Pp3c2_8820 Physcomitrium patens
PRCOL_00006363 Prasinoderma coloniale
Prupe.6G231600 Prunus persica
Prupe.8G129500 Prunus persica
Psat7g126600 Pisum sativum
PSO170G5925 Papaver somniferum
PSO210G2470 Papaver somniferum
QL06p040557 Quercus lobata
QL11p034756 Quercus lobata
RcHm_v2.0_Chr2g0106231 Rosa chinensis
RcHm_v2.0_Chr6g0256581 Rosa chinensis
Rhsim05G0087000 Rhododendron simsii
Rhsim10G0114000 Rhododendron simsii
Sabra05G0110500 Salix brachista
Sabra07G0041400 Salix brachista
Sabra09G0075500 Salix brachista
Sabra16G0190600 Salix brachista
SalBow3G3264 Salvia bowleyana
SalBow6G4630 Salvia bowleyana
Sc03g0001740 Simmondsia chinensis
Sed0003674 Sechium edule
Sed0022106 Sechium edule
Sed0023181 Sechium edule
SEGI_20643 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07341 Striga asiatica
SMO290G0009 Selaginella moellendorffii
SMO356G0007 Selaginella moellendorffii
SMO356G0511 Selaginella moellendorffii
Solyc01g107860.3 Solanum lycopersicum
Solyc02g064950.3 Solanum lycopersicum
Solyc02g093140.4 Solanum lycopersicum
Sopen01g050020 Solanum pennellii
Sopen02g015080 Solanum pennellii
Sopen02g037710 Solanum pennellii
Sp7g31840 Schrenkiella parvula
Sp7g34860 Schrenkiella parvula
TAR381G1526 Trochodendron aralioides
TAR625G1208 Trochodendron aralioides
TAR628G1338 Trochodendron aralioides
THA.LOC104804381 Tarenaya hassleriana
THA.LOC104807259 Tarenaya hassleriana
THA.LOC104819852 Tarenaya hassleriana
Thecc.01G060700 Theobroma cacao
Thecc.02G104000 Theobroma cacao
Thhalv10026134m.g Eutrema salsugineum
Thhalv10026144m.g Eutrema salsugineum
TPR.G12600 Trifolium pratense
TPR.G26910 Trifolium pratense
TWI09G0114 Tripterygium wilfordii
TWI31G0258 Tripterygium wilfordii
TWI73G0744 Tripterygium wilfordii
TWI79G1509 Tripterygium wilfordii
unitig_22.g6846 Utricularia gibba
unitig_699.g19873 Utricularia gibba
unitig_8.g3423 Utricularia gibba
vmacro05403 Vaccinium macrocarpon
vmacro19517 Vaccinium macrocarpon
VMungo0251G2274 Vigna mungo
VMungo1215G1796 Vigna mungo
Zm00001eb088050 Zea mays
Zm00001eb177480 Zea mays

User provided reference genes

Program Settings