Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35180 Brassica napus
A03p32300 Brassica napus
A04p13920 Brassica napus
A06p41400 Brassica napus
Aa31LG2G5220 Aethionema arabicum
Aa31LG5G11000 Aethionema arabicum
Actinidia04441 Actinidia chinensis
Actinidia05911 Actinidia chinensis
Actinidia30886 Actinidia chinensis
Actinidia36186 Actinidia chinensis
Ah.10g032580 Amaranthus hybridus
AL3G10270 Arabidopsis lyrata
AL5G16340 Arabidopsis lyrata
AL7G48710 Arabidopsis lyrata
Aqoxy3G01502 Aquilegia oxysepala
Aqoxy5G03422 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B2269S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4KLFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8Q4RG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL7NKK Arachis hypogaea
AT3G01860 Arabidopsis thaliana
AT3G27210 Arabidopsis thaliana
AT5G40860 Arabidopsis thaliana
ATR0561G065 Amborella trichopoda
Atru.chr11.2298 Acer truncatum
Atru.chr6.2535 Acer truncatum
Atru.chr9.1077 Acer truncatum
AUR62005516 Chenopodium quinoa
AUR62024226 Chenopodium quinoa
BcaB06g27569 Brassica carinata
BcaB07g30180 Brassica carinata
BcaC02g08997 Brassica carinata
BcaC02g10787 Brassica carinata
BcaC03g17437 Brassica carinata
BcaC06g30997 Brassica carinata
BcaC06g33843 Brassica carinata
BcaC06g33846 Brassica carinata
BcaC06g33849 Brassica carinata
BolC2t11453H Brassica oleracea
BolC4t26369H Brassica oleracea
BolC7t44140H Brassica oleracea
BraA02t08525Z Brassica rapa
BraA03t12400Z Brassica rapa
BraA04t17057Z Brassica rapa
BraA06t27065Z Brassica rapa
C02p53850 Brassica napus
C03p39350 Brassica napus
C04p47680 Brassica napus
C07p36260 Brassica napus
CAN.G1751.2 Capsicum annuum
CAN.G473.87 Capsicum annuum
CANSAT01G0961 Cannabis sativa
CANSAT64G0464 Cannabis sativa
CARHR075070 Cardamine hirsuta
CARHR148420 Cardamine hirsuta
CARHR213660 Cardamine hirsuta
Carub.0003s0021 Capsella rubella
Carub.0005s0544 Capsella rubella
Carub.0007s3464 Capsella rubella
Ca_04425_v3 Cicer arietinum L.
Cc07_g00670 Coffea canephora
CDE02G1966 Ceratophyllum demersum
CDE05G2656 Ceratophyllum demersum
CDE05G3573 Ceratophyllum demersum
CDE06G0607 Ceratophyllum demersum
Cfa007243 Carpinus fangiana
Cfa009334 Carpinus fangiana
Ciclev10016522m.g Citrus clementina
Ciclev10032698m.g Citrus clementina
CiPaw.03G053800 Carya illinoinensis
CiPaw.04G035400 Carya illinoinensis
CiPaw.05G112100 Carya illinoinensis
ClCG05G013370 Citrullus lanatus
ClCG11G007020 Citrullus lanatus
ClCG11G013790 Citrullus lanatus
COL.COLO4_17171 Corchorus olitorius
COL.COLO4_20357 Corchorus olitorius
COL.COLO4_20359 Corchorus olitorius
Cpa.g.c32694.2 Carica papaya
CsaV3_2G034190 Cucumis sativus L.
CsaV3_3G027170 Cucumis sativus L.
CsaV3_5G030380 Cucumis sativus L.
CSS0020364 Camellia sinensis var. sinensis
CSS0022008 Camellia sinensis var. sinensis
DCAR_011315 Daucus carota
DCAR_015090 Daucus carota
DCAR_021775 Daucus carota
Dinv10972 Davidia involucrata
Duzib147G0551 Durio zibethinus
Duzib187G0830 Durio zibethinus
Duzib251G0117 Durio zibethinus
Duzib264G0548 Durio zibethinus
Duzib268G1177 Durio zibethinus
ECA238G4360 Erigeron canadensis
ECA246G3938 Erigeron canadensis
EL10Ac2g03218 Beta vulgaris
Eucgr.B00122 Eucalyptus grandis
Eucgr.B03472 Eucalyptus grandis
Eucgr.I01656 Eucalyptus grandis
Eucgr.J02319 Eucalyptus grandis
FAN02G3740 Fragaria x ananassa
FAN05G0255 Fragaria x ananassa
FAN09G0528 Fragaria x ananassa
FAN12G0566 Fragaria x ananassa
FAN14G5847 Fragaria x ananassa
FAN17G0922 Fragaria x ananassa
FAN22G1123 Fragaria x ananassa
FvH4_4g23980 Fragaria vesca
FvH4_6g53190 Fragaria vesca
Glyma.05G076300 Glycine max
Glyma.16G058500 Glycine max
Glyma.19G074200 Glycine max
Glyma.19G088700 Glycine max
Gohir.A01G154900 Gossypium hirsutum
Gohir.A05G303801 Gossypium hirsutum
Gohir.A05G339300 Gossypium hirsutum
Gohir.A07G227200 Gossypium hirsutum
Gohir.A09G034900 Gossypium hirsutum
Gohir.A12G136400 Gossypium hirsutum
Gohir.D01G155000 Gossypium hirsutum
Gohir.D04G077800 Gossypium hirsutum
Gohir.D07G234300 Gossypium hirsutum
Gohir.D09G035700 Gossypium hirsutum
Gorai.001G269900 Gossypium raimondii
Gorai.002G191900 Gossypium raimondii
Gorai.006G040600 Gossypium raimondii
Gorai.012G087600 Gossypium raimondii
GSVIVG01001809001 Vitis vinifera
GSVIVG01010390001 Vitis vinifera
GSVIVG01010392001 Vitis vinifera
HanXRQChr07g0198291 Helianthus annuus
HanXRQChr09g0256151 Helianthus annuus
HanXRQChr14g0450671 Helianthus annuus
HanXRQChr15g0474921 Helianthus annuus
HanXRQChr15g0486931 Helianthus annuus
HanXRQChr17g0550131 Helianthus annuus
Haze_12356 Corylus avellana
Haze_12389 Corylus avellana
Haze_14856 Corylus avellana
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla
HPP92_023191 Vanilla planifolia
Hund13051 Selenicereus undatus
Lalb_Chr02g0157791 Lupinus albus
Lalb_Chr14g0363261 Lupinus albus
Lalb_Chr21g0317531 Lupinus albus
Lj1g0010837 Lotus japonicus
Lj2g0026031 Lotus japonicus
Lj7A608T54 Lonicera japonica
Lsat_1_v5_gn_0_30021 Lactuca sativa
Lsat_1_v5_gn_2_94100 Lactuca sativa
Manes.12G013100 Manihot esculenta
Manes.13G018000 Manihot esculenta
Manes.14G052600 Manihot esculenta
Manes.15G159300 Manihot esculenta
Manes.17G104100 Manihot esculenta
MBI07_g31942_MAGBIO Magnolia biondii
MBI07_g46198_MAGBIO Magnolia biondii
MD09G1013200 Malus domestica
MD16G1117200 Malus domestica
MD17G1013900 Malus domestica
Medtr6g023580 Medicago truncatula
Medtr7g029620 Medicago truncatula
MELO3C008201.2 Cucumis melo
MELO3C011878.2 Cucumis melo
MELO3C014870.2 Cucumis melo
Migut.F00077 Erythranthe guttata
Migut.K01455 Erythranthe guttata
MSTRG.15564 Avicennia marina
MSTRG.24087 Avicennia marina
MSTRG.3083 Avicennia marina
MSTRG.3262 Avicennia marina
Nitab4.5_0000559g0430 Nicotiana tabacum
Nitab4.5_0002887g0040 Nicotiana tabacum
Nitab4.5_0005161g0010 Nicotiana tabacum
Nitab4.5_0007150g0050 Nicotiana tabacum
Nn3g16504 Nelumbo nucifera
Nn4g22361 Nelumbo nucifera
Oeu011758.1 Olea europaea
Oeu011958.2 Olea europaea
Oeu035217.1 Olea europaea
Os01g0920100 Oryza sativa ssp. japonica
Os04g0380200 Oryza sativa ssp. japonica
Peaxi162Scf00166g00728 Petunia axillaris
Peaxi162Scf00420g00049 Petunia axillaris
Peaxi162Scf00700g00133 Petunia axillaris
PGR083G1199 Punica granatum
PGR102G0668 Punica granatum
PGR142G2012 Punica granatum
PGSC0003DMG400013426 Solanum tuberosum
PGSC0003DMG400020260 Solanum tuberosum
Phvul.001G095300 Phaseolus vulgaris
Phvul.004G055100 Phaseolus vulgaris
Potri.001G332500 Populus trichocarpa
Potri.008G176300 Populus trichocarpa
Potri.010G058700 Populus trichocarpa
Potri.012G096050 Populus trichocarpa
Prupe.1G229000 Prunus persica
Prupe.3G303900 Prunus persica
Psat1g085600 Pisum sativum
Psat7g264080 Pisum sativum
PSO017G1183 Papaver somniferum
PSO063G6187 Papaver somniferum
PSO478G2931 Papaver somniferum
PSO782G1501 Papaver somniferum
QL02p071781 Quercus lobata
QL03p053810 Quercus lobata
QL03p053884 Quercus lobata
QL03p054083 Quercus lobata
RcHm_v2.0_Chr2g0175231 Rosa chinensis
RcHm_v2.0_Chr4g0430641 Rosa chinensis
Rhsim08G0043900 Rhododendron simsii
Rhsim10G0007400 Rhododendron simsii
Sabra08G0134200 Salix brachista
Sabra10G0046900 Salix brachista
Sabra16G0213400 Salix brachista
SalBow4G0924 Salvia bowleyana
SalBow4G2864 Salvia bowleyana
Sc03g0006640 Simmondsia chinensis
Sc16g0003110 Simmondsia chinensis
Sed0001821 Sechium edule
Sed0018875 Sechium edule
Sed0022294 Sechium edule
Sed0025656 Sechium edule
SGA_v2.0_scaffold154G37166 Striga asiatica
SGA_v2.0_scaffold44G16907 Striga asiatica
SHI03908 Sapria himalayana
Solyc02g094030.3 Solanum lycopersicum
Solyc03g005030.3 Solanum lycopersicum
Sopen02g038670 Solanum pennellii
Sopen03g001040 Solanum pennellii
Sp2g16340 Schrenkiella parvula
Sp3g00210 Schrenkiella parvula
Sp7g01070 Schrenkiella parvula
TAR371G0695 Trochodendron aralioides
TAR371G1118 Trochodendron aralioides
TAR625G0026 Trochodendron aralioides
TAR629G0052 Trochodendron aralioides
TAR633G1056 Trochodendron aralioides
THA.LOC104805334 Tarenaya hassleriana
THA.LOC104821117 Tarenaya hassleriana
THA.LOC104823975 Tarenaya hassleriana
THA.LOC104825613 Tarenaya hassleriana
Thecc.02G277100 Theobroma cacao
Thecc.04G033600 Theobroma cacao
Thhalv10004813m.g Eutrema salsugineum
Thhalv10021476m.g Eutrema salsugineum
Thhalv10028135m.g Eutrema salsugineum
TPR.G38258 Trifolium pratense
TPR.G7520 Trifolium pratense
TWI12G0788 Tripterygium wilfordii
TWI56G0933 Tripterygium wilfordii
TWI75G1382 Tripterygium wilfordii
vmacro18333 Vaccinium macrocarpon
VMungo0464G1570 Vigna mungo
VMungo1383G3513 Vigna mungo
Zm00001eb085780 Zea mays
Zm00001eb143270 Zea mays
Zm00001eb364520 Zea mays

User provided reference genes

Program Settings