Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01670 Brassica napus
A04p33530 Brassica napus
A09p52630 Brassica napus
Aa31LG10G14470 Aethionema arabicum
Aa31LG1G26430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2598 Anthoceros agrestis
Actinidia12151 Actinidia chinensis
Actinidia12648 Actinidia chinensis
Actinidia33500 Actinidia chinensis
Actinidia40386 Actinidia chinensis
Ah.05g173240 Amaranthus hybridus
AL4G43990 Arabidopsis lyrata
AL5G42590 Arabidopsis lyrata
Aqoxy3G02758 Aquilegia oxysepala
Aqoxy7G00845 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NJU9W5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3UC0F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4V8RQ Arachis hypogaea
AT2G14635 Arabidopsis thaliana
AT2G44900 Arabidopsis thaliana
AT3G60350 Arabidopsis thaliana
ATR0057G096 Amborella trichopoda
Atru.chr1.908 Acer truncatum
Atru.chr5.154 Acer truncatum
AUR62013732 Chenopodium quinoa
AUR62023421 Chenopodium quinoa
AUR62037643 Chenopodium quinoa
BcaB01g03300 Brassica carinata
BcaB02g08173 Brassica carinata
BcaB06g29404 Brassica carinata
BcaC02g07120 Brassica carinata
BcaC02g10150 Brassica carinata
BcaC07g40426 Brassica carinata
BcaC07g40427 Brassica carinata
BcaC07g40428 Brassica carinata
BcaC07g40430 Brassica carinata
BcaC07g40431 Brassica carinata
BcaC07g42772 Brassica carinata
BcaNung06045 Brassica carinata
BolC3t15325H Brassica oleracea
BolC4t24773H Brassica oleracea
BolC4t28633H Brassica oleracea
BolC8t51129H Brassica oleracea
BraA04t15891Z Brassica rapa
BraA04t18815Z Brassica rapa
BraA09t40692Z Brassica rapa
C03p29750 Brassica napus
C04p32220 Brassica napus
C04p71290 Brassica napus
C08p35360 Brassica napus
CAN.G362.8 Capsicum annuum
CAN.G724.20 Capsicum annuum
CANSAT81G0002 Cannabis sativa
CARHR140140 Cardamine hirsuta
CARHR170670 Cardamine hirsuta
Carub.0004s2749 Capsella rubella
Carub.0005s2710 Capsella rubella
Ca_04037_v3 Cicer arietinum L.
Cc02_g24970 Coffea canephora
Cc02_g24980 Coffea canephora
Cc10_g11810 Coffea canephora
CDE04G1047 Ceratophyllum demersum
CDE04G1105 Ceratophyllum demersum
CDE12G0117 Ceratophyllum demersum
CDE12G0794 Ceratophyllum demersum
Ciclev10004368m.g Citrus clementina
Ciclev10018755m.g Citrus clementina
CiPaw.13G027700 Carya illinoinensis
CiPaw.14G021300 Carya illinoinensis
ClCG05G000420 Citrullus lanatus
COL.COLO4_12423 Corchorus olitorius
COL.COLO4_37342 Corchorus olitorius
Cpa.g.c40010 Carica papaya
Cpa.g.sc101.20 Carica papaya
Cpa.g.sc101.21 Carica papaya
Cpa.g.sc5743.1 Carica papaya
CsaV3_3G007580 Cucumis sativus L.
CSS0010116 Camellia sinensis var. sinensis
CSS0031736 Camellia sinensis var. sinensis
DCAR_018761 Daucus carota
DCAR_025070 Daucus carota
DCAR_029753 Daucus carota
Dinv43631 Davidia involucrata
Dinv44071 Davidia involucrata
Duzib068G1177 Durio zibethinus
Duzib133G0660 Durio zibethinus
Duzib138G1927 Durio zibethinus
ECA240G2280 Erigeron canadensis
EL10Ac1g00777 Beta vulgaris
Eucgr.D01517 Eucalyptus grandis
FAN01G1804 Fragaria x ananassa
FAN03G1630 Fragaria x ananassa
FAN03G1771 Fragaria x ananassa
FAN06G0846 Fragaria x ananassa
FAN06G1336 Fragaria x ananassa
FAN06G2173 Fragaria x ananassa
FAN10G1673 Fragaria x ananassa
FAN10G1881 Fragaria x ananassa
FvH4_7g09880 Fragaria vesca
Glyma.09G242200 Glycine max
Glyma.18G253400 Glycine max
Gohir.A03G059800 Gossypium hirsutum
Gohir.A08G029600 Gossypium hirsutum
Gohir.A08G059100 Gossypium hirsutum
Gohir.A11G039600 Gossypium hirsutum
Gohir.A12G096550 Gossypium hirsutum
Gohir.D01G151900 Gossypium hirsutum
Gohir.D01G171200 Gossypium hirsutum
Gohir.D02G137300 Gossypium hirsutum
Gohir.D02G157900 Gossypium hirsutum
Gohir.D03G106150 Gossypium hirsutum
Gohir.D08G040400 Gossypium hirsutum
Gohir.D08G068300 Gossypium hirsutum
Gohir.D11G042900 Gossypium hirsutum
Gohir.D12G099366 Gossypium hirsutum
Gorai.003G112400 Gossypium raimondii
Gorai.004G039300 Gossypium raimondii
Gorai.004G071500 Gossypium raimondii
Gorai.006G068200 Gossypium raimondii
Gorai.006G069100 Gossypium raimondii
Gorai.007G046200 Gossypium raimondii
Gorai.008G108200 Gossypium raimondii
Gorai.009G301300 Gossypium raimondii
Gorai.011G218400 Gossypium raimondii
GSVIVG01013967001 Vitis vinifera
GSVIVG01018254001 Vitis vinifera
HanXRQChr00c1287g0578911 Helianthus annuus
HanXRQChr00c1287g0578921 Helianthus annuus
HanXRQChr01g0009301 Helianthus annuus
HanXRQChr01g0010101 Helianthus annuus
HanXRQChr01g0014131 Helianthus annuus
HanXRQChr01g0016981 Helianthus annuus
HanXRQChr02g0054601 Helianthus annuus
HanXRQChr03g0093141 Helianthus annuus
HanXRQChr03g0093221 Helianthus annuus
HanXRQChr06g0179241 Helianthus annuus
HanXRQChr07g0196831 Helianthus annuus
HanXRQChr08g0223151 Helianthus annuus
HanXRQChr11g0332071 Helianthus annuus
HanXRQChr13g0387641 Helianthus annuus
HanXRQChr13g0421571 Helianthus annuus
HanXRQChr13g0421581 Helianthus annuus
HanXRQChr13g0423391 Helianthus annuus
HanXRQChr16g0527861 Helianthus annuus
Haze_02816 Corylus avellana
HPP92_014909 Vanilla planifolia
Hund27403 Selenicereus undatus
Lalb_Chr03g0040291 Lupinus albus
Lalb_Chr19g0126581 Lupinus albus
Lj1g0021466 Lotus japonicus
Lj7A544G39 Lonicera japonica
Lj7A544T39 Lonicera japonica
Lsat_1_v5_gn_3_131781 Lactuca sativa
Manes.01G272500 Manihot esculenta
Manes.05G053400 Manihot esculenta
Manes.14G038600 Manihot esculenta
Mapoly0049s0122 Marchantia polymorpha
Mapoly0150s0009 Marchantia polymorpha
Mapoly2904s0001 Marchantia polymorpha
MD02G1216100 Malus domestica
MD07G1104300 Malus domestica
Medtr7g007780 Medicago truncatula
MELO3C005980.2 Cucumis melo
Migut.B01547 Erythranthe guttata
Migut.N01752 Erythranthe guttata
Migut.O00537 Erythranthe guttata
MSTRG.20699 Avicennia marina
MSTRG.28154 Avicennia marina
MSTRG.4927 Avicennia marina
Nitab4.5_0003553g0050 Nicotiana tabacum
Nitab4.5_0003553g0060 Nicotiana tabacum
Nitab4.5_0003696g0020 Nicotiana tabacum
Nn1g00881 Nelumbo nucifera
Nn6g33838 Nelumbo nucifera
Oeu011233.1 Olea europaea
Oeu011234.1 Olea europaea
Oeu024170.1 Olea europaea
Oeu031409.1 Olea europaea
Oeu031413.1 Olea europaea
Oeu063227.1 Olea europaea
Os10g0563200 Oryza sativa ssp. japonica
Peaxi162Scf00030g00516 Petunia axillaris
Peaxi162Scf00030g00518 Petunia axillaris
PGR004G2363 Punica granatum
Phvul.008G045600 Phaseolus vulgaris
Potri.001G079300 Populus trichocarpa
Potri.002G137100 Populus trichocarpa
Potri.014G046000 Populus trichocarpa
Pp3c12_9670 Physcomitrium patens
Pp3c12_9730 Physcomitrium patens
Pp3c4_17860 Physcomitrium patens
Pp3s1164_10 Physcomitrium patens
Prupe.2G127900 Prunus persica
Psat3g195880 Pisum sativum
PSO063G0076 Papaver somniferum
PSO782G2159 Papaver somniferum
QL04p030794 Quercus lobata
QL04p030830 Quercus lobata
QL04p030868 Quercus lobata
RcHm_v2.0_Chr1g0347431 Rosa chinensis
Rhsim01G0138900 Rhododendron simsii
Rhsim07G0034900 Rhododendron simsii
Rhsim07G0035000 Rhododendron simsii
Rhsim07G0035100 Rhododendron simsii
Sabra01G0056800 Salix brachista
Sabra02G0106100 Salix brachista
Sabra14G0033500 Salix brachista
SalBow5G0878 Salvia bowleyana
SalBow5G1432 Salvia bowleyana
SalBow5G1872 Salvia bowleyana
Sc02g0003040 Simmondsia chinensis
Sed0006090 Sechium edule
Sed0010164 Sechium edule
SEGI_03510 Sequoiadendron giganteum
SEGI_09430 Sequoiadendron giganteum
SEGI_18219 Sequoiadendron giganteum
SEGI_39260 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36913 Striga asiatica
SGA_v2.0_scaffold52G19217 Striga asiatica
SMO143G0319 Selaginella moellendorffii
Solyc01g090420.4 Solanum lycopersicum
Sopen01g036210 Solanum pennellii
Sp4g26970 Schrenkiella parvula
Sp5g02870 Schrenkiella parvula
Sp5g02880 Schrenkiella parvula
SpUN0080_0050 Schrenkiella parvula
TAR374G0587 Trochodendron aralioides
TAR375G0449 Trochodendron aralioides
TAR375G0872 Trochodendron aralioides
THA.LOC104802491 Tarenaya hassleriana
THA.LOC104817192 Tarenaya hassleriana
Thecc.01G393100 Theobroma cacao
Thecc.03G149100 Theobroma cacao
Thhalv10001300m.g Eutrema salsugineum
Thhalv10005776m.g Eutrema salsugineum
TPR.G12223 Trifolium pratense
TPR.G32620 Trifolium pratense
TPR.G32631 Trifolium pratense
TPR.G40563 Trifolium pratense
TPR.G9711 Trifolium pratense
TWI14G0886 Tripterygium wilfordii
TWI14G1152 Tripterygium wilfordii
TWI59G0032 Tripterygium wilfordii
TWI59G0861 Tripterygium wilfordii
unitig_26.g8869 Utricularia gibba
unitig_26.g8870 Utricularia gibba
vmacro13487 Vaccinium macrocarpon
vmacro13488 Vaccinium macrocarpon
vmacro13489 Vaccinium macrocarpon
vmacro13490 Vaccinium macrocarpon
vmacro18977 Vaccinium macrocarpon
vmacro21053 Vaccinium macrocarpon
vmacro21167 Vaccinium macrocarpon
vmacro22320 Vaccinium macrocarpon
vmacro23013 Vaccinium macrocarpon
VMungo1383G0712 Vigna mungo
Zm00001eb023660 Zea mays
Zm00001eb269460 Zea mays
Zm00001eb390940 Zea mays
Zm00001eb390950 Zea mays

User provided reference genes

Program Settings