Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03680 Brassica napus
A03p46380 Brassica napus
A10p28470 Brassica napus
Aa31LG11G2620 Aethionema arabicum
Aa31LG3G18340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4194 Anthoceros agrestis
Actinidia04060 Actinidia chinensis
Actinidia04323 Actinidia chinensis
Ah.01g001540 Amaranthus hybridus
Ah.01g001550 Amaranthus hybridus
Ah.01g012330 Amaranthus hybridus
AL6G18610 Arabidopsis lyrata
AL6G34320 Arabidopsis lyrata
Aqoxy3G04257 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14QP5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3EVX7H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5B0U0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7E86KB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2LH82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KK2QPE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8H25D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RHK7Y5 Arachis hypogaea
AT5G08200 Arabidopsis thaliana
AT5G23130 Arabidopsis thaliana
ATR0618G391 Amborella trichopoda
Atru.chr11.1151 Acer truncatum
Atru.chr9.105 Acer truncatum
AUR62015235 Chenopodium quinoa
AUR62017697 Chenopodium quinoa
BcaB01g05622 Brassica carinata
BcaB07g33337 Brassica carinata
BcaB07g33338 Brassica carinata
BcaB08g37275 Brassica carinata
BcaC03g13211 Brassica carinata
BcaC03g13213 Brassica carinata
BcaC04g23482 Brassica carinata
BcaNung05092 Brassica carinata
BcaNung05093 Brassica carinata
BolC2t06307H Brassica oleracea
BolC3t12949H Brassica oleracea
BolC7t44962H Brassica oleracea
BolC9t53701H Brassica oleracea
BolC9t59621H Brassica oleracea
BraA02t04946Z Brassica rapa
BraA03t09716Z Brassica rapa
BraA03t13764Z Brassica rapa
BraA10t44895Z Brassica rapa
C02p03460 Brassica napus
C03p04170 Brassica napus
C07p44400 Brassica napus
C09p68740 Brassica napus
CAN.G157.28 Capsicum annuum
CANSAT56G1621 Cannabis sativa
CARHR190400 Cardamine hirsuta
CARHR204970 Cardamine hirsuta
CARHR204980 Cardamine hirsuta
CARHR215540 Cardamine hirsuta
Carub.0006s0710 Capsella rubella
Carub.0006s2092 Capsella rubella
Ca_03381_v3 Cicer arietinum L.
Ca_11832_v3 Cicer arietinum L.
Ca_12980_v3 Cicer arietinum L.
CBR_g51238 Chara braunii
Cc11_g02290 Coffea canephora
CDE04G1266 Ceratophyllum demersum
CDE05G1878 Ceratophyllum demersum
CDE07G0854 Ceratophyllum demersum
Cfa008739 Carpinus fangiana
Cfa017835 Carpinus fangiana
Ciclev10020822m.g Citrus clementina
Ciclev10032391m.g Citrus clementina
CiPaw.05G168900 Carya illinoinensis
CiPaw.06G060500 Carya illinoinensis
CiPaw.06G060600 Carya illinoinensis
CiPaw.16G072300 Carya illinoinensis
ClCG01G014850 Citrullus lanatus
ClCG09G004530 Citrullus lanatus
ClCG10G011950 Citrullus lanatus
COL.COLO4_19601 Corchorus olitorius
Cpa.g.sc0.146 Carica papaya
Cpa.g.sc467.2 Carica papaya
Cre07.g339600 Chlamydomonas reinhardtii
CsaV3_1G007480 Cucumis sativus L.
CsaV3_3G031410 Cucumis sativus L.
CsaV3_7G030610 Cucumis sativus L.
CSS0039901 Camellia sinensis var. sinensis
DCAR_002577 Daucus carota
DCAR_023454 Daucus carota
DCAR_026900 Daucus carota
DCAR_030382 Daucus carota
Dinv11719 Davidia involucrata
Dinv17608 Davidia involucrata
Dinv29258 Davidia involucrata
Duzib052G0930 Durio zibethinus
Duzib132G0519 Durio zibethinus
Duzib248G0716 Durio zibethinus
ECA233G4240 Erigeron canadensis
ECA246G4527 Erigeron canadensis
EL10Ac9g22947 Beta vulgaris
Eucgr.H00642 Eucalyptus grandis
Eucgr.J00866 Eucalyptus grandis
Eucgr.K02313 Eucalyptus grandis
FAN04G1776 Fragaria x ananassa
FAN07G1339 Fragaria x ananassa
FAN08G0274 Fragaria x ananassa
FAN12G0116 Fragaria x ananassa
FAN13G2428 Fragaria x ananassa
FAN17G1224 Fragaria x ananassa
FAN18G1405 Fragaria x ananassa
FvH4_4g36950 Fragaria vesca
FvH4_5g18360 Fragaria vesca
Glyma.09G165100 Glycine max
Glyma.09G282400 Glycine max
Glyma.11G100600 Glycine max
Glyma.16G213400 Glycine max
Glyma.20G003100 Glycine max
Gohir.A01G012638 Gossypium hirsutum
Gohir.A03G164700 Gossypium hirsutum
Gohir.A12G133800 Gossypium hirsutum
Gohir.A13G060100 Gossypium hirsutum
Gohir.D01G013950 Gossypium hirsutum
Gohir.D02G187900 Gossypium hirsutum
Gohir.D13G061800 Gossypium hirsutum
Gorai.002G015700 Gossypium raimondii
Gorai.005G210600 Gossypium raimondii
Gorai.008G148600 Gossypium raimondii
Gorai.008G148900 Gossypium raimondii
Gorai.013G070300 Gossypium raimondii
GSVIVG01012047001 Vitis vinifera
GSVIVG01029341001 Vitis vinifera
HanXRQChr06g0171521 Helianthus annuus
HanXRQChr12g0366391 Helianthus annuus
HanXRQChr13g0387751 Helianthus annuus
HanXRQChr17g0544931 Helianthus annuus
Haze_11756 Corylus avellana
Haze_18376 Corylus avellana
Hma1.2p1_0122F.1_g057570 Hydrangea macrophylla
HPP92_022487 Vanilla planifolia
Hund24372 Selenicereus undatus
Lalb_Chr01g0001431 Lupinus albus
Lalb_Chr10g0094991 Lupinus albus
Lalb_Chr14g0370261 Lupinus albus
Lalb_Chr17g0337881 Lupinus albus
Lalb_Chr19g0139401 Lupinus albus
Lalb_Chr22g0353951 Lupinus albus
Lalb_Chr24g0398541 Lupinus albus
Lj2g0004037 Lotus japonicus
Lj2g0005161 Lotus japonicus
Lj3C849T16 Lonicera japonica
Lj3g0012925 Lotus japonicus
Lj6C719T4 Lonicera japonica
Lsat_1_v5_gn_3_35460 Lactuca sativa
Lsat_1_v5_gn_4_64720 Lactuca sativa
Lsat_1_v5_gn_8_33500 Lactuca sativa
Manes.02G220300 Manihot esculenta
Manes.11G107501 Manihot esculenta
Mapoly0012s0163 Marchantia polymorpha
MCO02G101 Micromonas commoda
MD06G1239300 Malus domestica
MD13G1005700 Malus domestica
MD14G1245200 Malus domestica
MD16G1002200 Malus domestica
Medtr1g037450 Medicago truncatula
Medtr6g077740 Medicago truncatula
MELO3C002164.2 Cucumis melo
MELO3C023595.2 Cucumis melo
MELO3C024023.2 Cucumis melo
Migut.E00698 Erythranthe guttata
Migut.L00860 Erythranthe guttata
MSTRG.13686 Avicennia marina
MSTRG.2059 Avicennia marina
MSTRG.8084 Avicennia marina
Nitab4.5_0000405g0060 Nicotiana tabacum
Nitab4.5_0000771g0080 Nicotiana tabacum
Nitab4.5_0005356g0100 Nicotiana tabacum
Nitab4.5_0006277g0030 Nicotiana tabacum
Nn3g18655 Nelumbo nucifera
Oeu026902.1 Olea europaea
Oeu028418.2 Olea europaea
Os06g0729900 Oryza sativa ssp. japonica
Os10g0485500 Oryza sativa ssp. japonica
Peaxi162Scf00363g00033 Petunia axillaris
Peaxi162Scf00473g00003 Petunia axillaris
PGR044G2474 Punica granatum
PGR083G2331 Punica granatum
PGSC0003DMG400010579 Solanum tuberosum
PGSC0003DMG400015026 Solanum tuberosum
PGSC0003DMG400019763 Solanum tuberosum
PGSC0003DMG400031464 Solanum tuberosum
PGSC0003DMG400039583 Solanum tuberosum
Phvul.003G005400 Phaseolus vulgaris
Phvul.004G139500 Phaseolus vulgaris
Phvul.006G036300 Phaseolus vulgaris
Phvul.011G029600 Phaseolus vulgaris
Potri.005G092800 Populus trichocarpa
Potri.007G071500 Populus trichocarpa
Potri.012G036600 Populus trichocarpa
Pp3c15_20580 Physcomitrium patens
Pp3c2_37160 Physcomitrium patens
Pp3c7_23420 Physcomitrium patens
Prupe.1G347300 Prunus persica
Prupe.5G243200 Prunus persica
Psat1g121800 Pisum sativum
Psat6g099320 Pisum sativum
PSO017G2812 Papaver somniferum
PSO063G1158 Papaver somniferum
PSO478G0115 Papaver somniferum
PSO782G1181 Papaver somniferum
PSO832G2529 Papaver somniferum
QL03p046358 Quercus lobata
QL10p034371 Quercus lobata
QL10p034378 Quercus lobata
RcHm_v2.0_Chr4g0446721 Rosa chinensis
RcHm_v2.0_Chr7g0177231 Rosa chinensis
Rhsim09G0076300 Rhododendron simsii
Sabra05G0076900 Salix brachista
Sabra07G0060200 Salix brachista
Sabra12G0025100 Salix brachista
Sabra15G0023500 Salix brachista
SalBow2G1005 Salvia bowleyana
SalBow6G1576 Salvia bowleyana
Sc10g0006950 Simmondsia chinensis
Sed0003440 Sechium edule
Sed0018371 Sechium edule
Sed0021624 Sechium edule
Sed0024984 Sechium edule
Sed0026870 Sechium edule
SEGI_14848 Sequoiadendron giganteum
SEGI_34884 Sequoiadendron giganteum
SGA_v2.0_scaffold187G40278 Striga asiatica
SGA_v2.0_scaffold88G27229 Striga asiatica
SMO259G0049 Selaginella moellendorffii
Solyc02g014090.3 Solanum lycopersicum
Solyc11g039960.2 Solanum lycopersicum
Sopen02g003670 Solanum pennellii
Sopen11g017760 Solanum pennellii
Sp2g23990 Schrenkiella parvula
Sp6g34740 Schrenkiella parvula
TAR629G1845 Trochodendron aralioides
THA.LOC104800897 Tarenaya hassleriana
THA.LOC104818371 Tarenaya hassleriana
THA.LOC104819378 Tarenaya hassleriana
Thecc.02G160100 Theobroma cacao
Thhalv10004348m.g Eutrema salsugineum
Thhalv10013674m.g Eutrema salsugineum
TPR.G19871 Trifolium pratense
TPR.G8238 Trifolium pratense
TWI36G1048 Tripterygium wilfordii
TWI74G1308 Tripterygium wilfordii
TWI77G0662 Tripterygium wilfordii
TWI81G0526 Tripterygium wilfordii
unitig_8.g2891 Utricularia gibba
vmacro10893 Vaccinium macrocarpon
VMungo0251G0947 Vigna mungo
VMungo0464G1737 Vigna mungo
VMungo1127G2253 Vigna mungo
Zm00001eb000790 Zea mays
Zm00001eb045390 Zea mays
Zm00001eb221300 Zea mays
Zm00001eb271790 Zea mays
Zm00001eb404180 Zea mays

User provided reference genes

Program Settings