Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14070 Brassica napus
A07p19790 Brassica napus
A10p23040 Brassica napus
Aa31LG11G13590 Aethionema arabicum
Aa31LG2G3590 Aethionema arabicum
Aa31LG9G16990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis
Actinidia10244 Actinidia chinensis
Actinidia13004 Actinidia chinensis
Actinidia18118 Actinidia chinensis
Actinidia19277 Actinidia chinensis
Actinidia19593 Actinidia chinensis
Actinidia29638 Actinidia chinensis
Actinidia36305 Actinidia chinensis
Ah.02g115020 Amaranthus hybridus
Ah.03g138020 Amaranthus hybridus
Ah.06g191000 Amaranthus hybridus
Ah.06g191010 Amaranthus hybridus
AL2G25720 Arabidopsis lyrata
AL6G26890 Arabidopsis lyrata
AL7G51930 Arabidopsis lyrata
Aqoxy3G00424 Aquilegia oxysepala
Aqoxy3G00430 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea
AT1G67210 Arabidopsis thaliana
AT5G16020 Arabidopsis thaliana
AT5G38600 Arabidopsis thaliana
ATR0598G067 Amborella trichopoda
ATR0820G227 Amborella trichopoda
Atru.chr8.789 Acer truncatum
Atru.chr8.797 Acer truncatum
AUR62002941 Chenopodium quinoa
AUR62007748 Chenopodium quinoa
AUR62008950 Chenopodium quinoa
AUR62014551 Chenopodium quinoa
AUR62025837 Chenopodium quinoa
AUR62029876 Chenopodium quinoa
BcaB02g08001 Brassica carinata
BcaB05g24247 Brassica carinata
BcaB08g36879 Brassica carinata
BcaC03g14816 Brassica carinata
BcaC04g18915 Brassica carinata
BcaC08g44397 Brassica carinata
BolC2t08421H Brassica oleracea
BolC6t37041H Brassica oleracea
BolC9t58948H Brassica oleracea
BraA02t06470Z Brassica rapa
BraA07t29680Z Brassica rapa
BraA10t44373Z Brassica rapa
C02p22680 Brassica napus
C09p61030 Brassica napus
CAN.G153.15 Capsicum annuum
CAN.G153.18 Capsicum annuum
CANSAT56G0222 Cannabis sativa
CANSAT56G3033 Cannabis sativa
CANSAT56G4171 Cannabis sativa
CANSAT64G0391 Cannabis sativa
CARHR059670 Cardamine hirsuta
CARHR197300 Cardamine hirsuta
CARHR214050 Cardamine hirsuta
Carub.0002s1348 Capsella rubella
Carub.0006s1420 Capsella rubella
Carub.0007s3725 Capsella rubella
Ca_14082_v3 Cicer arietinum L.
Ca_26958_v3 Cicer arietinum L.
CBR_g21963 Chara braunii
Cc07_g05000 Coffea canephora
Cc07_g05010 Coffea canephora
CDE03G0290 Ceratophyllum demersum
CDE03G0434 Ceratophyllum demersum
CDE04G2372 Ceratophyllum demersum
CDE06G1275 Ceratophyllum demersum
Cfa007960 Carpinus fangiana
Cfa007963 Carpinus fangiana
Ciclev10013582m.g Citrus clementina
CiPaw.03G005500 Carya illinoinensis
CiPaw.09G147200 Carya illinoinensis
CiPaw.09G147400 Carya illinoinensis
CiPaw.09G170800 Carya illinoinensis
ClCG11G005280 Citrullus lanatus
COL.COLO4_16207 Corchorus olitorius
COL.COLO4_16208 Corchorus olitorius
Cpa.g.sc179.38 Carica papaya
Cpa.g.sc179.39 Carica papaya
CsaV3_5G039050 Cucumis sativus L.
CSS0005448 Camellia sinensis var. sinensis
CSS0013506 Camellia sinensis var. sinensis
CSS0020455 Camellia sinensis var. sinensis
CSS0031641 Camellia sinensis var. sinensis
DCAR_011250 Daucus carota
DCAR_026269 Daucus carota
DCAR_026709 Daucus carota
Dinv33921 Davidia involucrata
Dinv33922 Davidia involucrata
Dinv34860 Davidia involucrata
Duzib151G0578 Durio zibethinus
Duzib177G0627 Durio zibethinus
Duzib235G0774 Durio zibethinus
Duzib268G0244 Durio zibethinus
ECA232G1923 Erigeron canadensis
ECA238G3370 Erigeron canadensis
EL10Ac2g04621 Beta vulgaris
EL10Ac5g11460 Beta vulgaris
EL10Ac6g14526 Beta vulgaris
Eucgr.J01458 Eucalyptus grandis
Eucgr.J01460 Eucalyptus grandis
FAN02G3008 Fragaria x ananassa
FAN02G3888 Fragaria x ananassa
FAN02G4200 Fragaria x ananassa
FAN05G1346 Fragaria x ananassa
FAN05G4565 Fragaria x ananassa
FAN09G0965 Fragaria x ananassa
FAN09G3897 Fragaria x ananassa
FAN14G1977 Fragaria x ananassa
FAN14G4630 Fragaria x ananassa
FvH4_6g45480 Fragaria vesca
FvH4_6g45490 Fragaria vesca
Glyma.13G047700 Glycine max
Glyma.13G047800 Glycine max
Glyma.14G157500 Glycine max
Glyma.19G040800 Glycine max
Glyma.19G043901 Glycine max
Gohir.A10G140200 Gossypium hirsutum
Gohir.A13G161700 Gossypium hirsutum
Gohir.D10G126600 Gossypium hirsutum
Gohir.D13G172300 Gossypium hirsutum
Gorai.011G139500 Gossypium raimondii
Gorai.013G188400 Gossypium raimondii
GSVIVG01011977001 Vitis vinifera
GSVIVG01036455001 Vitis vinifera
HanXRQChr07g0188201 Helianthus annuus
HanXRQChr14g0439661 Helianthus annuus
HanXRQChr14g0452391 Helianthus annuus
HanXRQChr15g0489371 Helianthus annuus
Haze_14108 Corylus avellana
Haze_14109 Corylus avellana
Haze_14111 Corylus avellana
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla
HPP92_011591 Vanilla planifolia
HPP92_020267 Vanilla planifolia
Hund05776 Selenicereus undatus
Lalb_Chr02g0158361 Lupinus albus
Lalb_Chr10g0092301 Lupinus albus
Lalb_Chr10g0092311 Lupinus albus
Lalb_Chr10g0092321 Lupinus albus
Lalb_Chr10g0092331 Lupinus albus
Lalb_Chr21g0317971 Lupinus albus
Lj2g0019105 Lotus japonicus
Lj2g0025982 Lotus japonicus
Lj3A1022T61 Lonicera japonica
Lj4A130G15 Lonicera japonica
Lj4A130T19 Lonicera japonica
Lsat_1_v5_gn_1_116020 Lactuca sativa
Lsat_1_v5_gn_2_86600 Lactuca sativa
Lsat_1_v5_gn_4_175880 Lactuca sativa
Lsat_1_v5_gn_8_136421 Lactuca sativa
Lsat_1_v5_gn_8_37540 Lactuca sativa
Manes.02G065900 Manihot esculenta
Manes.02G066000 Manihot esculenta
Mapoly0126s0021 Marchantia polymorpha
MBI16_g23736_MAGBIO Magnolia biondii
MD09G1082500 Malus domestica
MD09G1082600 Malus domestica
MD17G1073100 Malus domestica
Medtr6g016985 Medicago truncatula
Medtr6g016990 Medicago truncatula
MELO3C022066.2 Cucumis melo
Migut.H00535 Erythranthe guttata
MSTRG.23826 Avicennia marina
MSTRG.23827 Avicennia marina
Nitab4.5_0000612g0170 Nicotiana tabacum
Nitab4.5_0003461g0050 Nicotiana tabacum
Nitab4.5_0003461g0060 Nicotiana tabacum
Nitab4.5_0004487g0050 Nicotiana tabacum
Nn3g17671 Nelumbo nucifera
Nn8g40574 Nelumbo nucifera
Oeu032874.2 Olea europaea
Oeu043861.1 Olea europaea
Oeu043862.1 Olea europaea
Os01g0605400 Oryza sativa ssp. japonica
Os06g0495700 Oryza sativa ssp. japonica
Peaxi162Scf00479g00121 Petunia axillaris
Peaxi162Scf00479g00211 Petunia axillaris
PGR042G0381 Punica granatum
PGR042G2862 Punica granatum
PGSC0003DMG400003361 Solanum tuberosum
PGSC0003DMG400018767 Solanum tuberosum
Phvul.005G010600 Phaseolus vulgaris
Phvul.L003037 Phaseolus vulgaris
Potri.004G104400 Populus trichocarpa
Potri.004G104500 Populus trichocarpa
Potri.017G111300 Populus trichocarpa
Pp3c8_12390 Physcomitrium patens
Prupe.3G241000 Prunus persica
Prupe.3G241200 Prunus persica
Psat0s1160g0440 Pisum sativum
Psat1g062120 Pisum sativum
PSO013G0088 Papaver somniferum
PSO017G2525 Papaver somniferum
PSO478G1567 Papaver somniferum
PSO478G3319 Papaver somniferum
PSO832G3224 Papaver somniferum
QL02p053118 Quercus lobata
QL02p053130 Quercus lobata
RcHm_v2.0_Chr2g0163421 Rosa chinensis
RcHm_v2.0_Chr2g0163431 Rosa chinensis
Rhsim07G0215800 Rhododendron simsii
Rhsim10G0064400 Rhododendron simsii
Sabra04G0077100 Salix brachista
Sabra04G0077200 Salix brachista
Sabra17G0092600 Salix brachista
SalBow1G3878 Salvia bowleyana
SalBow1G4795 Salvia bowleyana
Sc11g0002970 Simmondsia chinensis
Sc11g0008110 Simmondsia chinensis
Sc12g0007600 Simmondsia chinensis
Sed0011770 Sechium edule
SEGI_27964 Sequoiadendron giganteum
SGA_v2.0_scaffold150G36614 Striga asiatica
SGA_v2.0_scaffold150G36618 Striga asiatica
SGA_v2.0_scaffold204G41654 Striga asiatica
SHI30168 Sapria himalayana
SMO005G0008 Selaginella moellendorffii
SMO116G0487 Selaginella moellendorffii
SMO118G0315 Selaginella moellendorffii
SMO197G0066 Selaginella moellendorffii
Solyc03g045060.3 Solanum lycopersicum
Solyc03g045080.3 Solanum lycopersicum
Sopen03g009500 Solanum pennellii
Sopen03g009540 Solanum pennellii
Sp5g22140 Schrenkiella parvula
Sp7g03340 Schrenkiella parvula
TAR371G0417 Trochodendron aralioides
TAR629G1560 Trochodendron aralioides
TAR629G1601 Trochodendron aralioides
THA.LOC104805556 Tarenaya hassleriana
THA.LOC104822697 Tarenaya hassleriana
THA.LOC104827464 Tarenaya hassleriana
Thecc.04G140400 Theobroma cacao
Thecc.04G140600 Theobroma cacao
Thhalv10015867m.g Eutrema salsugineum
Thhalv10018682m.g Eutrema salsugineum
Thhalv10027714m.g Eutrema salsugineum
TPR.G9672 Trifolium pratense
TPR.G9686 Trifolium pratense
TWI53G1449 Tripterygium wilfordii
TWI74G0354 Tripterygium wilfordii
unitig_736.g22255 Utricularia gibba
unitig_899.g15127 Utricularia gibba
vmacro04611 Vaccinium macrocarpon
vmacro05579 Vaccinium macrocarpon
vmacro05580 Vaccinium macrocarpon
VMungo0540G1549 Vigna mungo
Zm00001eb161540 Zea mays
Zm00001eb182330 Zea mays

User provided reference genes

Program Settings