Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03500 Brassica napus
A03p07200 Brassica napus
A03p07750 Brassica napus
A10p23420 Brassica napus
Aa31LG10G15860 Aethionema arabicum
Aa31LG11G13240 Aethionema arabicum
Aa31LG11G14060 Aethionema arabicum
Aa31LG4G1450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5227 Anthoceros agrestis
Actinidia03275 Actinidia chinensis
Actinidia06799 Actinidia chinensis
Actinidia19004 Actinidia chinensis
Actinidia35030 Actinidia chinensis
Ah.05g170170 Amaranthus hybridus
Ah.11g049560 Amaranthus hybridus
AL6G26390 Arabidopsis lyrata
AL6G27320 Arabidopsis lyrata
Aqoxy2G04040 Aquilegia oxysepala
Aqoxy3G03593 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N3F0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AG8095 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4YX61 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBA53Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KH93XI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG375V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S0JXUX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9Q8NZ Arachis hypogaea
AT5G15530 Arabidopsis thaliana
AT5G16390 Arabidopsis thaliana
ATR0064G004 Amborella trichopoda
ATR0215G023 Amborella trichopoda
Atru.chr12.1747 Acer truncatum
Atru.chr8.418 Acer truncatum
AUR62011858 Chenopodium quinoa
AUR62018912 Chenopodium quinoa
AUR62024703 Chenopodium quinoa
AUR62027735 Chenopodium quinoa
BcaB01g04983 Brassica carinata
BcaB01g05045 Brassica carinata
BcaC03g18490 Brassica carinata
BolC2t06750H Brassica oleracea
BolC3t13316H Brassica oleracea
BolC3t13393H Brassica oleracea
BolC9t59005H Brassica oleracea
BraA02t05321Z Brassica rapa
BraA03t10042Z Brassica rapa
BraA03t10102Z Brassica rapa
BraA10t44410Z Brassica rapa
C02p08300 Brassica napus
C03p08190 Brassica napus
C03p08970 Brassica napus
C04p08350 Brassica napus
C09p61670 Brassica napus
CAN.G1921.7 Capsicum annuum
CAN.G587.39 Capsicum annuum
CANSAT54G0633 Cannabis sativa
CANSAT64G2612 Cannabis sativa
CARHR196870 Cardamine hirsuta
CARHR197780 Cardamine hirsuta
Carub.0006s1370 Capsella rubella
Carub.0006s1458 Capsella rubella
Ca_04300_v3 Cicer arietinum L.
Ca_04329_v3 Cicer arietinum L.
Ca_08000_v3 Cicer arietinum L.
CBR_g50847 Chara braunii
Cc09_g03810 Coffea canephora
CDE02G1167 Ceratophyllum demersum
CDE05G0323 Ceratophyllum demersum
CDE05G3268 Ceratophyllum demersum
CDE06G1345 Ceratophyllum demersum
Cfa006246 Carpinus fangiana
Cfa007651 Carpinus fangiana
Ciclev10012287m.g Citrus clementina
Ciclev10012388m.g Citrus clementina
CiPaw.03G089800 Carya illinoinensis
CiPaw.04G056900 Carya illinoinensis
CiPaw.07G081900 Carya illinoinensis
CiPaw.08G114300 Carya illinoinensis
ClCG02G017070 Citrullus lanatus
ClCG07G007350 Citrullus lanatus
COL.COLO4_04802 Corchorus olitorius
COL.COLO4_21399 Corchorus olitorius
Cpa.g.sc123.26 Carica papaya
Cpa.g.sc14.162 Carica papaya
Cre17.g715250 Chlamydomonas reinhardtii
CsaV3_2G003700 Cucumis sativus L.
CsaV3_4G008750 Cucumis sativus L.
CSS0006789 Camellia sinensis var. sinensis
CSS0008456 Camellia sinensis var. sinensis
CSS0023861 Camellia sinensis var. sinensis
CSS0028136 Camellia sinensis var. sinensis
DCAR_026006 Daucus carota
DCAR_030000 Daucus carota
Dinv10694 Davidia involucrata
Dinv15378 Davidia involucrata
Dinv29087 Davidia involucrata
Duzib128G1495 Durio zibethinus
Duzib147G0593 Durio zibethinus
Duzib177G0097 Durio zibethinus
Duzib187G1041 Durio zibethinus
Duzib264G0725 Durio zibethinus
ECA232G2425 Erigeron canadensis
ECA247G3663 Erigeron canadensis
EL10Ac1g01247 Beta vulgaris
Eucgr.B01425 Eucalyptus grandis
Eucgr.J01371 Eucalyptus grandis
FAN02G3070 Fragaria x ananassa
FAN05G5085 Fragaria x ananassa
FAN09G2296 Fragaria x ananassa
FAN14G0126 Fragaria x ananassa
FvH4_6g47090 Fragaria vesca
Glyma.09G248900 Glycine max
Glyma.13G057400 Glycine max
Glyma.18G243500 Glycine max
Glyma.18G265300 Glycine max
Glyma.19G028800 Glycine max
Gohir.A05G371600 Gossypium hirsutum
Gohir.A06G112900 Gossypium hirsutum
Gohir.A09G010300 Gossypium hirsutum
Gohir.A13G114900 Gossypium hirsutum
Gohir.D04G044101 Gossypium hirsutum
Gohir.D06G117600 Gossypium hirsutum
Gohir.D09G009400 Gossypium hirsutum
Gohir.D13G117700 Gossypium hirsutum
Gorai.006G011100 Gossypium raimondii
Gorai.010G135200 Gossypium raimondii
Gorai.012G049400 Gossypium raimondii
Gorai.013G132300 Gossypium raimondii
GSVIVG01011511001 Vitis vinifera
GSVIVG01011513001 Vitis vinifera
GSVIVG01019068001 Vitis vinifera
HanXRQChr02g0042491 Helianthus annuus
HanXRQChr05g0157241 Helianthus annuus
HanXRQChr09g0270201 Helianthus annuus
HanXRQChr16g0502301 Helianthus annuus
Haze_04588 Corylus avellana
Haze_14443 Corylus avellana
HPP92_023628 Vanilla planifolia
Hund02921 Selenicereus undatus
Lalb_Chr01g0020561 Lupinus albus
Lalb_Chr06g0175011 Lupinus albus
Lalb_Chr21g0318391 Lupinus albus
Lj1C578G6 Lonicera japonica
Lj1g0001653 Lotus japonicus
Lj1g0022991 Lotus japonicus
Lj2g0014250 Lotus japonicus
Lj4C117T5 Lonicera japonica
Lj5A105G60 Lonicera japonica
Lj9A470T60 Lonicera japonica
Lsat_1_v5_gn_1_13581 Lactuca sativa
Lsat_1_v5_gn_5_23241 Lactuca sativa
Manes.01G097500 Manihot esculenta
Manes.02G053800 Manihot esculenta
Manes.12G004000 Manihot esculenta
Manes.13G004100 Manihot esculenta
Mapoly0082s0078 Marchantia polymorpha
Mapoly0086s0045 Marchantia polymorpha
MBI07_g00619_MAGBIO Magnolia biondii
MBI19_g03791_MAGBIO Magnolia biondii
MD09G1064200 Malus domestica
MD10G1103400 Malus domestica
MD17G1057500 Malus domestica
Medtr6g014880 Medicago truncatula
Medtr6g014990 Medicago truncatula
Medtr6g015020 Medicago truncatula
Medtr7g013100 Medicago truncatula
Medtr7g080290 Medicago truncatula
MELO3C004424.2 Cucumis melo
MELO3C016066.2 Cucumis melo
Migut.F01865 Erythranthe guttata
Migut.F02109 Erythranthe guttata
Migut.I00317 Erythranthe guttata
MSTRG.11351 Avicennia marina
MSTRG.27400 Avicennia marina
MSTRG.4458 Avicennia marina
Nitab4.5_0000582g0010 Nicotiana tabacum
Nitab4.5_0001961g0010 Nicotiana tabacum
Nitab4.5_0005160g0030 Nicotiana tabacum
Nitab4.5_0014883g0010 Nicotiana tabacum
Nn1g09808 Nelumbo nucifera
Nn3g17410 Nelumbo nucifera
Oeu008266.1 Olea europaea
Oeu009735.1 Olea europaea
Oeu010163.1 Olea europaea
Oeu027146.1 Olea europaea
Peaxi162Scf00013g00635 Petunia axillaris
Peaxi162Scf00353g00743 Petunia axillaris
Peaxi162Scf00702g00057 Petunia axillaris
PGR083G1835 Punica granatum
PGR083G2819 Punica granatum
PGR119G1957 Punica granatum
PGSC0003DMG400033054 Solanum tuberosum
PGSC0003DMG401023454 Solanum tuberosum
Phvul.004G034300 Phaseolus vulgaris
Phvul.004G035000 Phaseolus vulgaris
Phvul.008G053000 Phaseolus vulgaris
Potri.004G119000 Populus trichocarpa
Potri.017G092500 Populus trichocarpa
Potri.019G054400 Populus trichocarpa
Pp3c16_12600 Physcomitrium patens
Pp3c27_4050 Physcomitrium patens
PRCOL_00000360 Prasinoderma coloniale
Prupe.3G256800 Prunus persica
Prupe.7G000300 Prunus persica
Psat0s846g0040 Pisum sativum
Psat1g067360 Pisum sativum
Psat3g102480 Pisum sativum
PSO017G4087 Papaver somniferum
PSO478G0807 Papaver somniferum
QL01p048324 Quercus lobata
QL02p067892 Quercus lobata
RcHm_v2.0_Chr2g0166141 Rosa chinensis
Rhsim08G0147600 Rhododendron simsii
Rhsim12G0151800 Rhododendron simsii
Sabra04G0068900 Salix brachista
Sabra17G0081600 Salix brachista
Sabra19G0063400 Salix brachista
SalBow1G0240 Salvia bowleyana
Sc01g0000310 Simmondsia chinensis
Sc17g0000610 Simmondsia chinensis
Sed0000655 Sechium edule
Sed0021011 Sechium edule
SEGI_09661 Sequoiadendron giganteum
SEGI_29509 Sequoiadendron giganteum
SEGI_31896 Sequoiadendron giganteum
SEGI_36512 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33189 Striga asiatica
SGA_v2.0_scaffold340G49306 Striga asiatica
SMO358G0624 Selaginella moellendorffii
Solyc05g056290.4 Solanum lycopersicum
Solyc06g069530.3 Solanum lycopersicum
Sopen05g034680 Solanum pennellii
Sopen06g026820 Solanum pennellii
Sp6g27780 Schrenkiella parvula
Sp6g28570 Schrenkiella parvula
TAR056G0001 Trochodendron aralioides
TAR371G0944 Trochodendron aralioides
TAR629G3230 Trochodendron aralioides
TAR636G0290 Trochodendron aralioides
THA.LOC104802957 Tarenaya hassleriana
THA.LOC104802971 Tarenaya hassleriana
THA.LOC104822334 Tarenaya hassleriana
THA.LOC104827172 Tarenaya hassleriana
Thecc.03G098500 Theobroma cacao
Thecc.04G092800 Theobroma cacao
Thecc.05G190300 Theobroma cacao
Thecc.K0007800 Theobroma cacao
Thhalv10014313m.g Eutrema salsugineum
Thhalv10014486m.g Eutrema salsugineum
TPR.G10001 Trifolium pratense
TPR.G33900 Trifolium pratense
TWI18G0794 Tripterygium wilfordii
TWI36G0051 Tripterygium wilfordii
TWI60G0315 Tripterygium wilfordii
TWI75G1327 Tripterygium wilfordii
unitig_52.g17504 Utricularia gibba
vmacro16508 Vaccinium macrocarpon
vmacro17596 Vaccinium macrocarpon
VMungo0464G0311 Vigna mungo
VMungo0464G0456 Vigna mungo
VMungo1383G1554 Vigna mungo

User provided reference genes

Program Settings