Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29050 Brassica napus
A09p28590 Brassica napus
A09p50120 Brassica napus
Aa31LG10G12090 Aethionema arabicum
Aa31LG9G14560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3954 Anthoceros agrestis
Actinidia06299 Actinidia chinensis
Actinidia09294 Actinidia chinensis
Actinidia39191 Actinidia chinensis
Actinidia39365 Actinidia chinensis
Ah.09g232210 Amaranthus hybridus
Ah.13g076720 Amaranthus hybridus
AL5G38670 Arabidopsis lyrata
AL6G44690 Arabidopsis lyrata
Aqoxy3G02142 Aquilegia oxysepala
Aqoxy7G01203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5ZDB9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64XXL3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9G159B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EM8ZKT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWKW36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TE5HJ9 Arachis hypogaea
AT4G10620 Arabidopsis thaliana
ATR0053G004 Amborella trichopoda
ATR0691G266 Amborella trichopoda
ATR0693G257 Amborella trichopoda
ATR0749G082 Amborella trichopoda
Atru.chr1.1250 Acer truncatum
Atru.chr3.2189 Acer truncatum
AUR62015924 Chenopodium quinoa
AUR62024749 Chenopodium quinoa
AUR62026142 Chenopodium quinoa
AUR62030392 Chenopodium quinoa
BcaB01g01493 Brassica carinata
BcaC04g21051 Brassica carinata
BcaC07g40038 Brassica carinata
BcaC07g40039 Brassica carinata
BcaC07g40067 Brassica carinata
BolC8t50865H Brassica oleracea
BolC9t56460H Brassica oleracea
BraA03t12100Z Brassica rapa
BraA09t38420Z Brassica rapa
BraA09t40463Z Brassica rapa
C08p32490 Brassica napus
C09p36220 Brassica napus
CAN.G140.30 Capsicum annuum
CAN.G140.36 Capsicum annuum
CAN.G619.40 Capsicum annuum
CAN.G619.41 Capsicum annuum
CANSAT80G1176 Cannabis sativa
CANSAT80G1658 Cannabis sativa
CARHR167360 Cardamine hirsuta
CARHR255950 Cardamine hirsuta
Carub.0005s2400 Capsella rubella
Carub.0006s2943 Capsella rubella
Ca_08422_v3 Cicer arietinum L.
Ca_19031_v3 Cicer arietinum L.
CBR_g40558 Chara braunii
Cc01_g00960 Coffea canephora
Cc06_g18460 Coffea canephora
CDE01G0616 Ceratophyllum demersum
CDE02G1852 Ceratophyllum demersum
CDE10G0205 Ceratophyllum demersum
CDE10G0576 Ceratophyllum demersum
CDE10G0807 Ceratophyllum demersum
CDE10G0908 Ceratophyllum demersum
Cfa000964 Carpinus fangiana
Cfa005683 Carpinus fangiana
Cfa007106 Carpinus fangiana
Cfa009628 Carpinus fangiana
Cfa011070 Carpinus fangiana
Cfa016748 Carpinus fangiana
Ciclev10004493m.g Citrus clementina
Ciclev10014661m.g Citrus clementina
CiPaw.09G043000 Carya illinoinensis
CiPaw.13G171200 Carya illinoinensis
ClCG02G023810 Citrullus lanatus
ClCG08G003410 Citrullus lanatus
COL.COLO4_09136 Corchorus olitorius
COL.COLO4_21284 Corchorus olitorius
COL.COLO4_36417 Corchorus olitorius
Cpa.g.sc119.93 Carica papaya
Cpa.g.sc5.216 Carica papaya
Cre07.g315400 Chlamydomonas reinhardtii
CsaV3_4G023560 Cucumis sativus L.
CsaV3_6G004050 Cucumis sativus L.
CSS0038007 Camellia sinensis var. sinensis
CSS0039271 Camellia sinensis var. sinensis
DCAR_018990 Daucus carota
DCAR_020533 Daucus carota
DCAR_020534 Daucus carota
Dinv30285 Davidia involucrata
Dinv36334 Davidia involucrata
Duzib128G0525 Durio zibethinus
Duzib133G0550 Durio zibethinus
ECA236G1356 Erigeron canadensis
ECA246G0761 Erigeron canadensis
ECA248G0452 Erigeron canadensis
ECA248G2351 Erigeron canadensis
EL10Ac1g01558 Beta vulgaris
EL10Ac3g07172 Beta vulgaris
Eucgr.A02292 Eucalyptus grandis
Eucgr.B02614 Eucalyptus grandis
FAN02G3333 Fragaria x ananassa
FAN05G0737 Fragaria x ananassa
FAN05G1381 Fragaria x ananassa
FAN05G3619 Fragaria x ananassa
FAN11G0610 Fragaria x ananassa
FAN14G3278 Fragaria x ananassa
FAN16G0803 Fragaria x ananassa
FAN21G1366 Fragaria x ananassa
FAN25G0100 Fragaria x ananassa
FvH4_3g44540 Fragaria vesca
FvH4_6g24800 Fragaria vesca
Glyma.03G132000 Glycine max
Glyma.11G101800 Glycine max
Glyma.19G133900 Glycine max
Gohir.A09G119700 Gossypium hirsutum
Gohir.A11G121100 Gossypium hirsutum
Gohir.D09G115900 Gossypium hirsutum
Gohir.D11G126200 Gossypium hirsutum
Gorai.006G134200 Gossypium raimondii
Gorai.007G134900 Gossypium raimondii
GSVIVG01025382001 Vitis vinifera
GSVIVG01033559001 Vitis vinifera
GSVIVG01038462001 Vitis vinifera
HanXRQChr01g0021171 Helianthus annuus
HanXRQChr04g0121301 Helianthus annuus
HanXRQChr04g0124961 Helianthus annuus
Haze_19756 Corylus avellana
Haze_22997 Corylus avellana
Hma1.2p1_0972F.1_g242880 Hydrangea macrophylla
HPP92_003074 Vanilla planifolia
HPP92_007660 Vanilla planifolia
HPP92_028568 Vanilla planifolia
Hund21651 Selenicereus undatus
Lalb_Chr01g0001471 Lupinus albus
Lalb_Chr25g0287031 Lupinus albus
Lj1A1118T29 Lonicera japonica
Lj1A1118T30 Lonicera japonica
Lj1C1121G13 Lonicera japonica
Lj1g0008941 Lotus japonicus
Lj2A687G20 Lonicera japonica
Lj2C680G1 Lonicera japonica
Lj3g0010476 Lotus japonicus
Lsat_1_v5_gn_1_68301 Lactuca sativa
Lsat_1_v5_gn_8_83061 Lactuca sativa
Manes.03G089300 Manihot esculenta
Manes.08G054900 Manihot esculenta
Mapoly0074s0049 Marchantia polymorpha
MBI01_g09941_MAGBIO Magnolia biondii
MBI16_g23766_MAGBIO Magnolia biondii
MCO14G424 Micromonas commoda
MD03G1012100 Malus domestica
MD11G1014800 Malus domestica
MD12G1089400 Malus domestica
MD12G1089600 Malus domestica
MD14G1081400 Malus domestica
Medtr4g074870 Medicago truncatula
Medtr7g090640 Medicago truncatula
MELO3C011684.2 Cucumis melo
MELO3C014660.2 Cucumis melo
Migut.B01406 Erythranthe guttata
Migut.D02537 Erythranthe guttata
Migut.N00611 Erythranthe guttata
MSTRG.17075 Avicennia marina
MSTRG.20954 Avicennia marina
Nitab4.5_0000771g0170 Nicotiana tabacum
Nitab4.5_0001568g0020 Nicotiana tabacum
Nitab4.5_0005356g0070 Nicotiana tabacum
Nitab4.5_0005477g0010 Nicotiana tabacum
Nn1g01897 Nelumbo nucifera
Nn5g27657 Nelumbo nucifera
Oeu023942.3 Olea europaea
Oeu042057.1 Olea europaea
Os06g0498900 Oryza sativa ssp. japonica
Os09g0364500 Oryza sativa ssp. japonica
Peaxi162Scf00151g00077 Petunia axillaris
Peaxi162Scf00441g00056 Petunia axillaris
PGR031G3576 Punica granatum
PGR119G0585 Punica granatum
PGSC0003DMG400015964 Solanum tuberosum
PGSC0003DMG400024230 Solanum tuberosum
PGSC0003DMG400032193 Solanum tuberosum
PGSC0003DMG400032543 Solanum tuberosum
Phvul.001G128000 Phaseolus vulgaris
Phvul.011G030900 Phaseolus vulgaris
Potri.001G010400 Populus trichocarpa
Potri.006G044700 Populus trichocarpa
Pp3c18_21830 Physcomitrium patens
PRCOL_00003561 Prasinoderma coloniale
Prupe.6G012300 Prunus persica
Prupe.7G049400 Prunus persica
Psat3g075680 Pisum sativum
Psat7g176240 Pisum sativum
PSO063G3737 Papaver somniferum
PSO173G0120 Papaver somniferum
PSO478G3133 Papaver somniferum
PSO782G3240 Papaver somniferum
QL01p010147 Quercus lobata
QL01p010162 Quercus lobata
QL01p010176 Quercus lobata
QL01p010206 Quercus lobata
QL01p010229 Quercus lobata
QL07p004674 Quercus lobata
QL07p004704 Quercus lobata
QL07p004756 Quercus lobata
RcHm_v2.0_Chr3g0484591 Rosa chinensis
RcHm_v2.0_Chr5g0081231 Rosa chinensis
RcHm_v2.0_Chr5g0081271 Rosa chinensis
Rhsim01G0186200 Rhododendron simsii
Rhsim03G0031300 Rhododendron simsii
Sabra01G0008200 Salix brachista
Sabra06G0030900 Salix brachista
SalBow3G1390 Salvia bowleyana
Sc13g0001450 Simmondsia chinensis
Sc13g0001460 Simmondsia chinensis
Sc25g0002890 Simmondsia chinensis
Sed0007029 Sechium edule
Sed0009746 Sechium edule
SEGI_02585 Sequoiadendron giganteum
SEGI_22583 Sequoiadendron giganteum
SEGI_29554 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01651 Striga asiatica
SGA_v2.0_scaffold5G03102 Striga asiatica
SHI30469 Sapria himalayana
SMO340G0110 Selaginella moellendorffii
Solyc01g006180.4 Solanum lycopersicum
Solyc04g009280.1 Solanum lycopersicum
Solyc04g009300.4 Solanum lycopersicum
Sopen01g002190 Solanum pennellii
Sopen04g004400 Solanum pennellii
Sp5g05390 Schrenkiella parvula
Sp6g06830 Schrenkiella parvula
TAR362G1152 Trochodendron aralioides
TAR362G1304 Trochodendron aralioides
TAR375G1154 Trochodendron aralioides
TAR626G0637 Trochodendron aralioides
TAR626G1373 Trochodendron aralioides
TAR626G1877 Trochodendron aralioides
TAR626G1917 Trochodendron aralioides
THA.LOC104803285 Tarenaya hassleriana
Thecc.01G283400 Theobroma cacao
Thecc.05G144500 Theobroma cacao
Thhalv10005825m.g Eutrema salsugineum
Thhalv10028526m.g Eutrema salsugineum
TPR.G32322 Trifolium pratense
TPR.G32749 Trifolium pratense
TPR.G4363 Trifolium pratense
TPR.G4372 Trifolium pratense
TWI34G1355 Tripterygium wilfordii
TWI74G1367 Tripterygium wilfordii
unitig_22.g5420 Utricularia gibba
unitig_26.g9581 Utricularia gibba
unitig_26.g9582 Utricularia gibba
vmacro20877 Vaccinium macrocarpon
vmacro20878 Vaccinium macrocarpon
vmacro21953 Vaccinium macrocarpon
VMungo1080G0556 Vigna mungo
VMungo1383G0401 Vigna mungo
Zm00001eb196080 Zea mays
Zm00001eb311090 Zea mays

User provided reference genes

Program Settings