Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36430 Brassica napus
A04p10770 Brassica napus
A05p31830 Brassica napus
A06p04340 Brassica napus
A07p29760 Brassica napus
A07p39470 Brassica napus
Aa31LG10G5210 Aethionema arabicum
Aa31LG4G3800 Aethionema arabicum
Aa31LG4G3810 Aethionema arabicum
Aa31LG8G4850 Aethionema arabicum
Aa31LG9G7140 Aethionema arabicum
Aa31LG9G7160 Aethionema arabicum
Aa31LG9G7170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2342 Anthoceros agrestis
Actinidia04722 Actinidia chinensis
Actinidia04723 Actinidia chinensis
Actinidia18899 Actinidia chinensis
Actinidia35126 Actinidia chinensis
Ah.02g115610 Amaranthus hybridus
Ah.07g200790 Amaranthus hybridus
Ah.11g045260 Amaranthus hybridus
Ah.12g055350 Amaranthus hybridus
Ah.14g082250 Amaranthus hybridus
AL1G55250 Arabidopsis lyrata
AL2G33350 Arabidopsis lyrata
AL3G31150 Arabidopsis lyrata
Aqoxy3G00070 Aquilegia oxysepala
Aqoxy4G00556 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AHW3IA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AKH3QU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DWWZ6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6QC8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U54SN6 Arachis hypogaea
AT1G48600 Arabidopsis thaliana
AT1G73600 Arabidopsis thaliana
AT3G18000 Arabidopsis thaliana
ATR0681G073 Amborella trichopoda
Atru.chr9.1739 Acer truncatum
AUR62007335 Chenopodium quinoa
AUR62018665 Chenopodium quinoa
AUR62018666 Chenopodium quinoa
AUR62042376 Chenopodium quinoa
AUR62044157 Chenopodium quinoa
AUR62044208 Chenopodium quinoa
BcaB03g15063 Brassica carinata
BcaB03g15064 Brassica carinata
BcaB03g15719 Brassica carinata
BcaB04g17500 Brassica carinata
BcaB04g18336 Brassica carinata
BcaB05g22444 Brassica carinata
BcaB06g25865 Brassica carinata
BcaB07g30583 Brassica carinata
BcaB07g32649 Brassica carinata
BcaB07g33738 Brassica carinata
BcaB07g33739 Brassica carinata
BcaB07g33740 Brassica carinata
BcaC04g19389 Brassica carinata
BcaC05g28728 Brassica carinata
BcaC08g43061 Brassica carinata
BcaC08g45634 Brassica carinata
BcaC08g46778 Brassica carinata
BcaC08g46779 Brassica carinata
BcaC09g48761 Brassica carinata
BcaNung06275 Brassica carinata
BolC1t04580H Brassica oleracea
BolC5t33566H Brassica oleracea
BolC6t35437H Brassica oleracea
BolC6t38507H Brassica oleracea
BolC6t39807H Brassica oleracea
BraA01t03708Z Brassica rapa
BraA04t16741Z Brassica rapa
BraA05t22014Z Brassica rapa
BraA06t23638Z Brassica rapa
BraA07t30614Z Brassica rapa
BraA07t31496Z Brassica rapa
BraSC92t46714Z Brassica rapa
C01p46180 Brassica napus
C05p48320 Brassica napus
C06p03200 Brassica napus
C06p33950 Brassica napus
C06p47690 Brassica napus
C09p56220 Brassica napus
CAN.G1129.58 Capsicum annuum
CAN.G121.4 Capsicum annuum
CAN.G423.29 Capsicum annuum
CAN.G423.30 Capsicum annuum
CANSAT80G0387 Cannabis sativa
CANSAT80G2092 Cannabis sativa
CARHR038200 Cardamine hirsuta
CARHR066620 Cardamine hirsuta
CARHR093310 Cardamine hirsuta
Carub.0001s3771 Capsella rubella
Carub.0001s3772 Capsella rubella
Carub.0001s3773 Capsella rubella
Carub.0002s2034 Capsella rubella
Carub.0003s1771 Capsella rubella
Ca_17186_v3 Cicer arietinum L.
Ca_25336_v3 Cicer arietinum L.
Ca_29640_v3 Cicer arietinum L.
CBR_g34001 Chara braunii
Cc04_g06300 Coffea canephora
CDE02G2430 Ceratophyllum demersum
Cfa019662 Carpinus fangiana
Ciclev10010749m.g Citrus clementina
CiPaw.15G143100 Carya illinoinensis
CiPaw.16G093100 Carya illinoinensis
ClCG04G010640 Citrullus lanatus
ClCG06G014340 Citrullus lanatus
COL.COLO4_37682 Corchorus olitorius
Cpa.g.sc3.400 Carica papaya
CsaV3_1G004320 Cucumis sativus L.
CsaV3_1G004330 Cucumis sativus L.
CsaV3_1G007140 Cucumis sativus L.
CSS0000951 Camellia sinensis var. sinensis
CSS0014166 Camellia sinensis var. sinensis
CSS0046851 Camellia sinensis var. sinensis
DCAR_014501 Daucus carota
Dinv04745 Davidia involucrata
Dinv27620 Davidia involucrata
Duzib068G0303 Durio zibethinus
Duzib084G1039 Durio zibethinus
ECA238G4024 Erigeron canadensis
EL10Ac1g01515 Beta vulgaris
EL10Ac5g12040 Beta vulgaris
EL10Ac8g20282 Beta vulgaris
Eucgr.B00946 Eucalyptus grandis
FAN04G2602 Fragaria x ananassa
FAN08G0251 Fragaria x ananassa
FAN13G1231 Fragaria x ananassa
FAN18G1544 Fragaria x ananassa
FvH4_5g17300 Fragaria vesca
Glyma.05G246500 Glycine max
Glyma.07G102700 Glycine max
Glyma.08G048567 Glycine max
Glyma.08G048633 Glycine max
Glyma.09G176132 Glycine max
Gohir.A03G093100 Gossypium hirsutum
Gohir.A12G269200 Gossypium hirsutum
Gohir.D02G122100 Gossypium hirsutum
Gohir.D12G269600 Gossypium hirsutum
Gorai.005G132000 Gossypium raimondii
Gorai.008G289900 Gossypium raimondii
GSVIVG01008429001 Vitis vinifera
GSVIVG01011713001 Vitis vinifera
GSVIVG01011715001 Vitis vinifera
HanXRQChr06g0179691 Helianthus annuus
HanXRQChr11g0338751 Helianthus annuus
HanXRQChr14g0431071 Helianthus annuus
HanXRQChr14g0433271 Helianthus annuus
Haze_18845 Corylus avellana
Haze_18846 Corylus avellana
Hma1.2p1_4020F.1_g338160 Hydrangea macrophylla
HPP92_008161 Vanilla planifolia
Hund10288 Selenicereus undatus
Hund10289 Selenicereus undatus
Hund10290 Selenicereus undatus
Lalb_Chr05g0221641 Lupinus albus
Lalb_Chr09g0330381 Lupinus albus
Lj2g0019434 Lotus japonicus
Lj2g0020956 Lotus japonicus
Lj4g0021249 Lotus japonicus
Lj5A157T57 Lonicera japonica
Lsat_1_v5_gn_2_11881 Lactuca sativa
Manes.06G007100 Manihot esculenta
Manes.14G171000 Manihot esculenta
Mapoly0024s0110 Marchantia polymorpha
MBI13_g01088_MAGBIO Magnolia biondii
MCO16G594 Micromonas commoda
MD06G1226700 Malus domestica
MD14G1236000 Malus domestica
Medtr6g069600 Medicago truncatula
Medtr8g107370 Medicago truncatula
MELO3C002131.2 Cucumis melo
MELO3C017356.2 Cucumis melo
MELO3C029740.2 Cucumis melo
Migut.D01552 Erythranthe guttata
Migut.I00307 Erythranthe guttata
MSTRG.22934 Avicennia marina
MSTRG.4577 Avicennia marina
MSTRG.9300 Avicennia marina
Nitab4.5_0001456g0210 Nicotiana tabacum
Nitab4.5_0007327g0030 Nicotiana tabacum
Nitab4.5_0009467g0020 Nicotiana tabacum
Nitab4.5_0011657g0020 Nicotiana tabacum
Nitab4.5_0011970g0030 Nicotiana tabacum
Nn3g18274 Nelumbo nucifera
Nn4g24226 Nelumbo nucifera
Oeu031771.1 Olea europaea
Os01g0695100 Oryza sativa ssp. japonica
Os05g0548900 Oryza sativa ssp. japonica
Peaxi162Scf00207g00034 Petunia axillaris
Peaxi162Scf00571g00523 Petunia axillaris
Peaxi162Scf00683g00459 Petunia axillaris
PGR083G0016 Punica granatum
PGR083G1276 Punica granatum
PGSC0003DMG400005749 Solanum tuberosum
PGSC0003DMG400014459 Solanum tuberosum
PGSC0003DMG400028798 Solanum tuberosum
Phvul.002G330400 Phaseolus vulgaris
Phvul.004G150500 Phaseolus vulgaris
Potri.012G047301 Populus trichocarpa
Potri.012G047400 Populus trichocarpa
Potri.015G039000 Populus trichocarpa
Pp3c13_3410 Physcomitrium patens
Pp3c4_11050 Physcomitrium patens
Pp3c4_24470 Physcomitrium patens
Prupe.5G233000 Prunus persica
Psat1g030720 Pisum sativum
Psat7g002960 Pisum sativum
PSO017G3448 Papaver somniferum
PSO478G1796 Papaver somniferum
PSO478G2797 Papaver somniferum
PSO832G2347 Papaver somniferum
QL10p028523 Quercus lobata
RcHm_v2.0_Chr3g0488691 Rosa chinensis
RcHm_v2.0_Chr7g0178471 Rosa chinensis
Rhsim12G0138400 Rhododendron simsii
Sabra12G0033300 Salix brachista
Sabra15G0037800 Salix brachista
Sc10g0009250 Simmondsia chinensis
Sed0009311 Sechium edule
Sed0012848 Sechium edule
Sed0015959 Sechium edule
Sed0018784 Sechium edule
SEGI_09925 Sequoiadendron giganteum
SEGI_10558 Sequoiadendron giganteum
SEGI_28546 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38503 Striga asiatica
SMO117G0248 Selaginella moellendorffii
Solyc03g118750.4 Solanum lycopersicum
Solyc06g068950.4 Solanum lycopersicum
Solyc12g040790.2 Solanum lycopersicum
Sopen03g037690 Solanum pennellii
Sopen06g026240 Solanum pennellii
Sopen12g020550 Solanum pennellii
Sp1g35550 Schrenkiella parvula
Sp3g16110 Schrenkiella parvula
Sp5g28760 Schrenkiella parvula
TAR371G0874 Trochodendron aralioides
TAR622G0878 Trochodendron aralioides
TAR629G0050 Trochodendron aralioides
THA.LOC104798729 Tarenaya hassleriana
THA.LOC104809626 Tarenaya hassleriana
THA.LOC104814039 Tarenaya hassleriana
Thecc.03G054900 Theobroma cacao
Thhalv10011451m.g Eutrema salsugineum
Thhalv10012068m.g Eutrema salsugineum
Thhalv10018431m.g Eutrema salsugineum
Thhalv10020595m.g Eutrema salsugineum
TPR.G1459 Trifolium pratense
TPR.G20547 Trifolium pratense
TPR.G8622 Trifolium pratense
TWI15G0267 Tripterygium wilfordii
TWI81G0405 Tripterygium wilfordii
unitig_52.g17267 Utricularia gibba
unitig_699.g19658 Utricularia gibba
vmacro16412 Vaccinium macrocarpon
VMungo0251G1775 Vigna mungo
VMungo0464G1191 Vigna mungo
Zm00001eb155940 Zea mays
Zm00001eb294690 Zea mays
Zm00001eb360800 Zea mays

User provided reference genes

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