Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_344.1875 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1877 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.890 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.578 Anthoceros agrestis
Actinidia06547 Actinidia chinensis
Actinidia06550 Actinidia chinensis
Actinidia06633 Actinidia chinensis
Actinidia07571 Actinidia chinensis
Actinidia11796 Actinidia chinensis
Actinidia19999 Actinidia chinensis
Actinidia20001 Actinidia chinensis
Ah.03g143990 Amaranthus hybridus
Ah.03g144000 Amaranthus hybridus
Ah.03g146780 Amaranthus hybridus
Aqoxy5G01083 Aquilegia oxysepala
Aqoxy5G01084 Aquilegia oxysepala
Aqoxy5G01085 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03H2AV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4ZKX3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J0TZYR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGDC4A Arachis hypogaea
ATR1136G006 Amborella trichopoda
ATR1136G030 Amborella trichopoda
ATR1136G057 Amborella trichopoda
ATR1136G063 Amborella trichopoda
ATR1136G150 Amborella trichopoda
ATR1136G166 Amborella trichopoda
ATR1136G173 Amborella trichopoda
ATR1136G177 Amborella trichopoda
ATR1136G187 Amborella trichopoda
Atru.chr4.856 Acer truncatum
AUR62001982 Chenopodium quinoa
AUR62003598 Chenopodium quinoa
AUR62003823 Chenopodium quinoa
AUR62017909 Chenopodium quinoa
AUR62043711 Chenopodium quinoa
CAN.G1032.2 Capsicum annuum
CAN.G1032.5 Capsicum annuum
CAN.G1032.6 Capsicum annuum
CAN.G1163.2 Capsicum annuum
CANSAT01G1539 Cannabis sativa
CANSAT01G2080 Cannabis sativa
Ca_17642_v3 Cicer arietinum L.
Ca_17643_v3 Cicer arietinum L.
Cc07_g18230 Coffea canephora
CDE02G1441 Ceratophyllum demersum
CDE04G3160 Ceratophyllum demersum
CDE04G3665 Ceratophyllum demersum
CDE07G0229 Ceratophyllum demersum
CDE07G0334 Ceratophyllum demersum
CDE07G0514 Ceratophyllum demersum
CDE07G0692 Ceratophyllum demersum
CDE07G1020 Ceratophyllum demersum
CDE07G1060 Ceratophyllum demersum
CDE07G1331 Ceratophyllum demersum
CDE07G1484 Ceratophyllum demersum
CDE07G1641 Ceratophyllum demersum
CDE07G1751 Ceratophyllum demersum
Cfa002878 Carpinus fangiana
Cfa021207 Carpinus fangiana
Ciclev10000628m.g Citrus clementina
Ciclev10000688m.g Citrus clementina
CiPaw.03G123100 Carya illinoinensis
CiPaw.03G123400 Carya illinoinensis
ClCG01G015460 Citrullus lanatus
COL.COLO4_35698 Corchorus olitorius
Cpa.g.sc42.142 Carica papaya
CsaV3_6G041700 Cucumis sativus L.
CSS0004480 Camellia sinensis var. sinensis
CSS0018540 Camellia sinensis var. sinensis
CSS0030832 Camellia sinensis var. sinensis
CSS0041802 Camellia sinensis var. sinensis
DCAR_010258 Daucus carota
Dinv05237 Davidia involucrata
Dinv06067 Davidia involucrata
Dinv24337 Davidia involucrata
Duzib264G0064 Durio zibethinus
Duzib264G0292 Durio zibethinus
Duzib264G0308 Durio zibethinus
Duzib264G0591 Durio zibethinus
Duzib264G0616 Durio zibethinus
Duzib264G1032 Durio zibethinus
Duzib264G1219 Durio zibethinus
ECA236G2072 Erigeron canadensis
ECA246G1286 Erigeron canadensis
ECA246G2143 Erigeron canadensis
EL10Ac6g15140 Beta vulgaris
EL10Ac6g15281 Beta vulgaris
EL10Ac7g17634 Beta vulgaris
Eucgr.H04953 Eucalyptus grandis
Eucgr.H04954 Eucalyptus grandis
Eucgr.H04955 Eucalyptus grandis
Eucgr.H04956 Eucalyptus grandis
Eucgr.H04958 Eucalyptus grandis
FAN19G0321 Fragaria x ananassa
FAN23G1286 Fragaria x ananassa
FAN26G2672 Fragaria x ananassa
FAN26G3095 Fragaria x ananassa
FAN28G0046 Fragaria x ananassa
FAN28G2350 Fragaria x ananassa
FvH4_1g24170 Fragaria vesca
Glyma.05G191000 Glycine max
Glyma.05G191100 Glycine max
Glyma.08G156300 Glycine max
Gohir.A11G056600 Gossypium hirsutum
Gohir.D11G060800 Gossypium hirsutum
Gorai.007G065500 Gossypium raimondii
GSVIVG01026500001 Vitis vinifera
GSVIVG01026501001 Vitis vinifera
GSVIVG01026502001 Vitis vinifera
GSVIVG01036635001 Vitis vinifera
HanXRQChr15g0469391 Helianthus annuus
HanXRQChr15g0469401 Helianthus annuus
HanXRQChr15g0469501 Helianthus annuus
HanXRQChr15g0469511 Helianthus annuus
Haze_24843 Corylus avellana
Haze_25202 Corylus avellana
Haze_25203 Corylus avellana
Haze_25204 Corylus avellana
Hma1.2p1_0218F.1_g092570 Hydrangea macrophylla
HPP92_005704 Vanilla planifolia
HPP92_005705 Vanilla planifolia
HPP92_005706 Vanilla planifolia
HPP92_005707 Vanilla planifolia
HPP92_005708 Vanilla planifolia
HPP92_005709 Vanilla planifolia
HPP92_005710 Vanilla planifolia
HPP92_005711 Vanilla planifolia
HPP92_005733 Vanilla planifolia
HPP92_005734 Vanilla planifolia
HPP92_005735 Vanilla planifolia
HPP92_005736 Vanilla planifolia
HPP92_005737 Vanilla planifolia
HPP92_005738 Vanilla planifolia
HPP92_005739 Vanilla planifolia
HPP92_005740 Vanilla planifolia
HPP92_022725 Vanilla planifolia
HPP92_022726 Vanilla planifolia
Hund13494 Selenicereus undatus
Hund13495 Selenicereus undatus
Hund13590 Selenicereus undatus
Hund13593 Selenicereus undatus
Hund13594 Selenicereus undatus
Hund13595 Selenicereus undatus
Lalb_Chr12g0203171 Lupinus albus
Lj1g0027018 Lotus japonicus
Lj3g0007016 Lotus japonicus
Lj4A847G45 Lonicera japonica
Lj4C846G5 Lonicera japonica
Lj4g0006471 Lotus japonicus
Lj4g0013583 Lotus japonicus
Lsat_1_v5_gn_5_33980 Lactuca sativa
Lsat_1_v5_gn_5_34261 Lactuca sativa
Lsat_1_v5_gn_5_34281 Lactuca sativa
Manes.13G082800 Manihot esculenta
Mapoly0008s0004 Marchantia polymorpha
Mapoly0011s0126 Marchantia polymorpha
MBI03_g00433_MAGBIO Magnolia biondii
MBI03_g46617_MAGBIO Magnolia biondii
MBI04_g21146_MAGBIO Magnolia biondii
MBI04_g21148_MAGBIO Magnolia biondii
MCO12G302 Micromonas commoda
MCO12G461 Micromonas commoda
MD15G1137100 Malus domestica
MD15G1137400 Malus domestica
Medtr8g093550 Medicago truncatula
Medtr8g093560 Medicago truncatula
MELO3C008050.2 Cucumis melo
Migut.H00731 Erythranthe guttata
Migut.H00732 Erythranthe guttata
Migut.H00734 Erythranthe guttata
Nitab4.5_0000805g0080 Nicotiana tabacum
Nitab4.5_0000805g0090 Nicotiana tabacum
Nitab4.5_0008071g0010 Nicotiana tabacum
Nitab4.5_0011375g0010 Nicotiana tabacum
Nitab4.5_0020308g0010 Nicotiana tabacum
Nn1g02039 Nelumbo nucifera
Nn1g06228 Nelumbo nucifera
Nn1g06231 Nelumbo nucifera
Nn3g19264 Nelumbo nucifera
Nn5g27742 Nelumbo nucifera
Nn5g28605 Nelumbo nucifera
Nn5g28606 Nelumbo nucifera
Nn5g28607 Nelumbo nucifera
Nn5g28609 Nelumbo nucifera
Nn5g28610 Nelumbo nucifera
Oeu037810.1 Olea europaea
Oeu037812.1 Olea europaea
Oeu047691.1 Olea europaea
Os01g0729600 Oryza sativa ssp. japonica
Os11g0209900 Oryza sativa ssp. japonica
Os12g0190400 Oryza sativa ssp. japonica
Os12g0191300 Oryza sativa ssp. japonica
Peaxi162Scf00589g00018 Petunia axillaris
Peaxi162Scf00589g00019 Petunia axillaris
Peaxi162Scf00589g00214 Petunia axillaris
PGR102G0193 Punica granatum
PGR102G0816 Punica granatum
PGSC0003DMG400028659 Solanum tuberosum
PGSC0003DMG400028660 Solanum tuberosum
PGSC0003DMG400028679 Solanum tuberosum
Phvul.002G271300 Phaseolus vulgaris
Phvul.002G271400 Phaseolus vulgaris
Potri.005G059801 Populus trichocarpa
Potri.005G059900 Populus trichocarpa
Potri.007G108800 Populus trichocarpa
Potri.007G108900 Populus trichocarpa
PRCOL_00007051 Prasinoderma coloniale
Prupe.4G280000 Prunus persica
Psat0s831g0080 Pisum sativum
Psat7g046200 Pisum sativum
Psat7g046240 Pisum sativum
PSO339G4415 Papaver somniferum
PSO541G2413 Papaver somniferum
PSO541G2450 Papaver somniferum
PSO541G3236 Papaver somniferum
QL03p010938 Quercus lobata
QL06p029091 Quercus lobata
RcHm_v2.0_Chr2g0120531 Rosa chinensis
RcHm_v2.0_Chr2g0120561 Rosa chinensis
Rhsim10G0135800 Rhododendron simsii
Sabra05G0050700 Salix brachista
Sabra07G0089000 Salix brachista
Sed0009181 Sechium edule
SGA_v2.0_scaffold289G47271 Striga asiatica
SHI25207 Sapria himalayana
SHI25208 Sapria himalayana
SMO117G0147 Selaginella moellendorffii
SMO201G0014 Selaginella moellendorffii
SMO201G0035 Selaginella moellendorffii
SMO201G0101 Selaginella moellendorffii
SMO201G0132 Selaginella moellendorffii
SMO201G0142 Selaginella moellendorffii
SMO201G0143 Selaginella moellendorffii
SMO201G0203 Selaginella moellendorffii
SMO201G0214 Selaginella moellendorffii
SMO328G0002 Selaginella moellendorffii
SMO328G0017 Selaginella moellendorffii
SMO328G0021 Selaginella moellendorffii
SMO328G0026 Selaginella moellendorffii
SMO328G0027 Selaginella moellendorffii
SMO328G0028 Selaginella moellendorffii
SMO328G0039 Selaginella moellendorffii
SMO328G0041 Selaginella moellendorffii
SMO328G0043 Selaginella moellendorffii
SMO328G0045 Selaginella moellendorffii
Solyc11g005830.2 Solanum lycopersicum
Solyc11g005840.2 Solanum lycopersicum
Solyc11g005860.2 Solanum lycopersicum
Sopen11g001790 Solanum pennellii
Sopen11g001800 Solanum pennellii
Sopen11g001810 Solanum pennellii
THA.LOC104820460 Tarenaya hassleriana
Thecc.01G129200 Theobroma cacao
TPR.G24659 Trifolium pratense
TPR.G37374 Trifolium pratense
TWI79G1312 Tripterygium wilfordii
vmacro12816 Vaccinium macrocarpon
VMungo0251G1590 Vigna mungo
VMungo0251G1832 Vigna mungo
Zm00001eb154230 Zea mays
Zm00001eb168640 Zea mays

User provided reference genes

Program Settings