Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10600 Brassica napus
A08p13880 Brassica napus
A09p62310 Brassica napus
Aa31LG6G1330 Aethionema arabicum
Aa31LG8G12330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2353 Anthoceros agrestis
Actinidia07636 Actinidia chinensis
Actinidia17958 Actinidia chinensis
Actinidia39502 Actinidia chinensis
Ah.13g076800 Amaranthus hybridus
AL3G34390 Arabidopsis lyrata
AL6G36740 Arabidopsis lyrata
AL7G35680 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.K86MNX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NB81DJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WZRS5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8UHTY Arachis hypogaea
AT4G18593 Arabidopsis thaliana
ATR0307G070 Amborella trichopoda
Atru.chr1.1397 Acer truncatum
Atru.chr10.1676 Acer truncatum
AUR62018358 Chenopodium quinoa
AUR62030304 Chenopodium quinoa
AUR62031196 Chenopodium quinoa
AUR62036604 Chenopodium quinoa
AUR62036934 Chenopodium quinoa
BcaB04g18484 Brassica carinata
BcaB08g34381 Brassica carinata
BcaC01g00550 Brassica carinata
BcaC07g41585 Brassica carinata
BcaC09g51485 Brassica carinata
BcaNung03819 Brassica carinata
BcaNung06737 Brassica carinata
BolC1t01228H Brassica oleracea
BolC3t20400H Brassica oleracea
BolC8t52139H Brassica oleracea
BraA01t01007Z Brassica rapa
BraA08t33373Z Brassica rapa
BraA09t41593Z Brassica rapa
C01p12540 Brassica napus
C03p81370 Brassica napus
C08p45870 Brassica napus
CAN.G370.68 Capsicum annuum
CAN.G8.30 Capsicum annuum
CANSAT11G1847 Cannabis sativa
CANSAT64G0741 Cannabis sativa
CARHR161780 Cardamine hirsuta
CARHR225440 Cardamine hirsuta
Carub.0006s0316 Capsella rubella
Carub.0007s2264 Capsella rubella
Ca_03476_v3 Cicer arietinum L.
Ca_08382_v3 Cicer arietinum L.
CBR_g28647 Chara braunii
Cc00_g08220 Coffea canephora
Cc00_g13160 Coffea canephora
Cc00_g15400 Coffea canephora
Cc00_g21340 Coffea canephora
Cc02_g14850 Coffea canephora
Cc06_g19640 Coffea canephora
CDE02G2541 Ceratophyllum demersum
CDE08G1322 Ceratophyllum demersum
CDE11G1228 Ceratophyllum demersum
Cfa019403 Carpinus fangiana
Cfa019995 Carpinus fangiana
Ciclev10012015m.g Citrus clementina
Ciclev10017879m.g Citrus clementina
CiPaw.09G048800 Carya illinoinensis
CiPaw.10G040800 Carya illinoinensis
CiPaw.10G058400 Carya illinoinensis
ClCG03G007770 Citrullus lanatus
ClCG10G013650 Citrullus lanatus
COL.COLO4_07076 Corchorus olitorius
COL.COLO4_31306 Corchorus olitorius
Cpa.g.sc209.15 Carica papaya
Cpa.g.sc92.80 Carica papaya
Cre07.g314351 Chlamydomonas reinhardtii
CsaV3_1G033400 Cucumis sativus L.
CsaV3_3G043000 Cucumis sativus L.
CSS0000794 Camellia sinensis var. sinensis
CSS0004855 Camellia sinensis var. sinensis
CSS0006853 Camellia sinensis var. sinensis
CSS0012659 Camellia sinensis var. sinensis
CSS0017575 Camellia sinensis var. sinensis
CSS0025737 Camellia sinensis var. sinensis
CSS0034722 Camellia sinensis var. sinensis
DCAR_004008 Daucus carota
DCAR_004010 Daucus carota
DCAR_009136 Daucus carota
DCAR_029780 Daucus carota
DCAR_031238 Daucus carota
Dinv03205 Davidia involucrata
Dinv40670 Davidia involucrata
Duzib128G0797 Durio zibethinus
Duzib192G0246 Durio zibethinus
Duzib235G0803 Durio zibethinus
ECA233G1535 Erigeron canadensis
ECA233G2731 Erigeron canadensis
ECA233G3050 Erigeron canadensis
ECA234G4417 Erigeron canadensis
ECA236G1481 Erigeron canadensis
ECA248G3411 Erigeron canadensis
EL10Ac3g07250 Beta vulgaris
EL10Ac8g20604 Beta vulgaris
Eucgr.A02231 Eucalyptus grandis
Eucgr.E02744 Eucalyptus grandis
FAN01G0401 Fragaria x ananassa
FAN03G1791 Fragaria x ananassa
FAN06G3043 Fragaria x ananassa
FAN10G2006 Fragaria x ananassa
FvH4_7g07280 Fragaria vesca
Glyma.03G126200 Glycine max
Glyma.08G348700 Glycine max
Glyma.18G160500 Glycine max
Glyma.19G129300 Glycine max
Gohir.A06G200400 Gossypium hirsutum
Gohir.A11G306800 Gossypium hirsutum
Gohir.D06G207700 Gossypium hirsutum
Gohir.D11G322300 Gossypium hirsutum
Gorai.007G352400 Gossypium raimondii
Gorai.010G242100 Gossypium raimondii
GSVIVG01025743001 Vitis vinifera
GSVIVG01026941001 Vitis vinifera
HanXRQChr01g0008101 Helianthus annuus
HanXRQChr13g0397291 Helianthus annuus
Haze_07802 Corylus avellana
Haze_20237 Corylus avellana
Hma1.2p1_0252F.1_g102820 Hydrangea macrophylla
Hma1.2p1_0987F.1_g244540 Hydrangea macrophylla
Hma1.2p1_0987F.1_g244560 Hydrangea macrophylla
HPP92_015454 Vanilla planifolia
Hund19086 Selenicereus undatus
Lalb_Chr18g0054461 Lupinus albus
Lalb_Chr22g0357531 Lupinus albus
Lalb_Chr24g0400401 Lupinus albus
Lalb_Chr24g0400411 Lupinus albus
Lj1A1089G59 Lonicera japonica
Lj1g0002338 Lotus japonicus
Lj1g0009963 Lotus japonicus
Lj2A298T34 Lonicera japonica
Lsat_1_v5_gn_5_156820 Lactuca sativa
Lsat_1_v5_gn_7_24081 Lactuca sativa
Manes.09G003600 Manihot esculenta
Manes.16G038500 Manihot esculenta
Mapoly0062s0043 Marchantia polymorpha
MBI13_g34552_MAGBIO Magnolia biondii
MBI19_g14620_MAGBIO Magnolia biondii
MBI19_g45267_MAGBIO Magnolia biondii
MCO16G038 Micromonas commoda
MD07G1116400 Malus domestica
MD12G1096300 Malus domestica
MD14G1050900 Malus domestica
MD14G1089400 Malus domestica
Medtr7g055923 Medicago truncatula
Medtr7g089540 Medicago truncatula
MELO3C002645.2 Cucumis melo
MELO3C026602.2 Cucumis melo
Migut.J01643 Erythranthe guttata
Migut.M01043 Erythranthe guttata
MSTRG.10788 Avicennia marina
MSTRG.19795 Avicennia marina
MSTRG.7402 Avicennia marina
Nitab4.5_0000605g0270 Nicotiana tabacum
Nitab4.5_0004629g0060 Nicotiana tabacum
Nitab4.5_0006225g0060 Nicotiana tabacum
Nitab4.5_0013137g0010 Nicotiana tabacum
Nn1g04392 Nelumbo nucifera
Nn7g36821 Nelumbo nucifera
Oeu001087.1 Olea europaea
Oeu005204.2 Olea europaea
Os02g0251700 Oryza sativa ssp. japonica
Os11g0136800 Oryza sativa ssp. japonica
Os12g0133700 Oryza sativa ssp. japonica
Peaxi162Scf00076g00319 Petunia axillaris
Peaxi162Scf00406g00712 Petunia axillaris
Peaxi162Scf01087g00001 Petunia axillaris
PGR031G2792 Punica granatum
PGR042G2210 Punica granatum
PGSC0003DMG400010244 Solanum tuberosum
Phvul.001G121600 Phaseolus vulgaris
Phvul.008G130200 Phaseolus vulgaris
Phvul.008G131000 Phaseolus vulgaris
Potri.004G056600 Populus trichocarpa
Potri.006G040300 Populus trichocarpa
Potri.016G035700 Populus trichocarpa
Pp3c20_10210 Physcomitrium patens
Pp3c22_9770 Physcomitrium patens
Pp3c23_1130 Physcomitrium patens
PRCOL_00000432 Prasinoderma coloniale
Prupe.4G082800 Prunus persica
Prupe.4G265900 Prunus persica
Prupe.7G034500 Prunus persica
Prupe.7G034700 Prunus persica
Prupe.7G035100 Prunus persica
Psat3g079800 Pisum sativum
Psat3g149000 Pisum sativum
PSO339G5736 Papaver somniferum
PSO384G0250 Papaver somniferum
PSO782G5198 Papaver somniferum
PSO832G0424 Papaver somniferum
QL05p046879 Quercus lobata
QL07p011356 Quercus lobata
QL07p011359 Quercus lobata
RcHm_v2.0_Chr0c29g0501071 Rosa chinensis
RcHm_v2.0_Chr1g0337531 Rosa chinensis
RcHm_v2.0_Chr1g0337541 Rosa chinensis
RcHm_v2.0_Chr1g0337741 Rosa chinensis
RcHm_v2.0_Chr1g0337801 Rosa chinensis
RcHm_v2.0_Chr1g0337841 Rosa chinensis
RcHm_v2.0_Chr1g0339501 Rosa chinensis
Rhsim03G0036700 Rhododendron simsii
Sabra04G0036600 Salix brachista
Sabra06G0027200 Salix brachista
Sabra16G0038000 Salix brachista
SalBow6G2761 Salvia bowleyana
SalBow8G2924 Salvia bowleyana
Sc05g0007140 Simmondsia chinensis
Sc25g0005460 Simmondsia chinensis
Sed0008427 Sechium edule
Sed0011158 Sechium edule
SEGI_25094 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07677 Striga asiatica
SGA_v2.0_scaffold66G22361 Striga asiatica
SMO010G0012 Selaginella moellendorffii
SMO134G0105 Selaginella moellendorffii
SMO137G0144 Selaginella moellendorffii
SMO143G0106 Selaginella moellendorffii
SMO163G0086 Selaginella moellendorffii
SMO196G0041 Selaginella moellendorffii
SMO275G0021 Selaginella moellendorffii
SMO340G0300 Selaginella moellendorffii
SMO353G0167 Selaginella moellendorffii
SMO367G1308 Selaginella moellendorffii
Solyc02g076900.4 Solanum lycopersicum
Solyc12g021180.2 Solanum lycopersicum
Solyc12g021190.2 Solanum lycopersicum
Sopen02g021830 Solanum pennellii
Sopen12g011090 Solanum pennellii
Sp7g15440 Schrenkiella parvula
TAR623G0758 Trochodendron aralioides
TAR625G0151 Trochodendron aralioides
TAR625G1189 Trochodendron aralioides
THA.LOC104798424 Tarenaya hassleriana
THA.LOC104823207 Tarenaya hassleriana
Thecc.05G127600 Theobroma cacao
Thecc.06G171500 Theobroma cacao
Thhalv10005645m.g Eutrema salsugineum
Thhalv10006429m.g Eutrema salsugineum
Thhalv10027050m.g Eutrema salsugineum
Thhalv10027467m.g Eutrema salsugineum
TPR.G16084 Trifolium pratense
TPR.G6489 Trifolium pratense
TWI63G1517 Tripterygium wilfordii
TWI74G0363 Tripterygium wilfordii
unitig_699.g19524 Utricularia gibba
vmacro07780 Vaccinium macrocarpon
vmacro15969 Vaccinium macrocarpon
VMungo1383G0177 Vigna mungo
VMungo1383G3140 Vigna mungo
Zm00001eb093380 Zea mays
Zm00001eb134920 Zea mays
Zm00001eb204320 Zea mays
Zm00001eb204400 Zea mays

User provided reference genes

Program Settings