Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14390 Brassica napus
A07p20720 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.2584 Anthoceros agrestis
Actinidia27387 Actinidia chinensis
Actinidia27389 Actinidia chinensis
Actinidia33758 Actinidia chinensis
Ah.02g116600 Amaranthus hybridus
Ah.12g057140 Amaranthus hybridus
Ah.12g057150 Amaranthus hybridus
AL7G48230 Arabidopsis lyrata
Aqoxy7G00349 Aquilegia oxysepala
Aqoxy7G00351 Aquilegia oxysepala
Aqoxy7G00352 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0KJ3EB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1ZP0M4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32B5JW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4WWH90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.83PYPK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.96WFPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AC6VM4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8I3MF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G1Z7A4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4VZIS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NTVY84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQJF1R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UZDQ9R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WF5M36 Arachis hypogaea
AT5G41210 Arabidopsis thaliana
AT5G41220 Arabidopsis thaliana
AT5G41240 Arabidopsis thaliana
ATR0680G212 Amborella trichopoda
Atru.chr9.2232 Acer truncatum
Atru.chr9.2234 Acer truncatum
AUR62010589 Chenopodium quinoa
AUR62010590 Chenopodium quinoa
AUR62010591 Chenopodium quinoa
AUR62017233 Chenopodium quinoa
AUR62017234 Chenopodium quinoa
BcaB02g07903 Brassica carinata
BcaC02g08975 Brassica carinata
BcaC08g44515 Brassica carinata
BolC4t26423H Brassica oleracea
BolC6t37159H Brassica oleracea
BraA04t17086Z Brassica rapa
BraA07t29763Z Brassica rapa
C04p48300 Brassica napus
C06p19670 Brassica napus
CAN.G26.13 Capsicum annuum
CAN.G297.14 Capsicum annuum
CAN.G472.6 Capsicum annuum
CAN.G774.5 Capsicum annuum
CAN.G774.6 Capsicum annuum
CAN.G774.8 Capsicum annuum
CAN.G792.83 Capsicum annuum
CANSAT21G0560 Cannabis sativa
CARHR213180 Cardamine hirsuta
Carub.0007s3427 Capsella rubella
Ca_17542_v3 Cicer arietinum L.
CBR_g12203 Chara braunii
Cc00_g34240 Coffea canephora
Cc00_g35580 Coffea canephora
Cc08_g14530 Coffea canephora
Cc08_g14540 Coffea canephora
Cc08_g14550 Coffea canephora
Cc08_g14560 Coffea canephora
Cc08_g14570 Coffea canephora
CDE08G1232 Ceratophyllum demersum
Cfa012161 Carpinus fangiana
Cfa012164 Carpinus fangiana
Ciclev10021831m.g Citrus clementina
Ciclev10021879m.g Citrus clementina
CiPaw.11G136700 Carya illinoinensis
CiPaw.12G094200 Carya illinoinensis
ClCG07G008040 Citrullus lanatus
Cpa.g.sc74.18 Carica papaya
Cre05.g247550 Chlamydomonas reinhardtii
CsaV3_4G006000 Cucumis sativus L.
CSS0005157 Camellia sinensis var. sinensis
CSS0014033 Camellia sinensis var. sinensis
CSS0017581 Camellia sinensis var. sinensis
CSS0023488 Camellia sinensis var. sinensis
CSS0023864 Camellia sinensis var. sinensis
CSS0034124 Camellia sinensis var. sinensis
CSS0035092 Camellia sinensis var. sinensis
CSS0041700 Camellia sinensis var. sinensis
CSS0042681 Camellia sinensis var. sinensis
DCAR_004645 Daucus carota
DCAR_008404 Daucus carota
Duzib068G1346 Durio zibethinus
Duzib084G1180 Durio zibethinus
ECA233G0711 Erigeron canadensis
ECA233G2591 Erigeron canadensis
ECA233G3838 Erigeron canadensis
EL10Ac5g12786 Beta vulgaris
EL10Ac5g12787 Beta vulgaris
Eucgr.D01861 Eucalyptus grandis
FAN04G0091 Fragaria x ananassa
FAN08G2864 Fragaria x ananassa
FAN13G0230 Fragaria x ananassa
FAN18G2033 Fragaria x ananassa
FvH4_5g02100 Fragaria vesca
Glyma.05G206900 Glycine max
Glyma.05G207000 Glycine max
Glyma.08G013700 Glycine max
Glyma.18G211500 Glycine max
Gohir.A08G181700 Gossypium hirsutum
Gohir.A08G181800 Gossypium hirsutum
Gohir.A08G181866 Gossypium hirsutum
Gohir.A11G022100 Gossypium hirsutum
Gohir.A11G022200 Gossypium hirsutum
Gohir.A12G227533 Gossypium hirsutum
Gohir.A12G227600 Gossypium hirsutum
Gohir.D08G200300 Gossypium hirsutum
Gohir.D08G200400 Gossypium hirsutum
Gohir.D11G021800 Gossypium hirsutum
Gohir.D11G021900 Gossypium hirsutum
Gohir.D12G229900 Gossypium hirsutum
Gohir.D12G230100 Gossypium hirsutum
Gorai.004G211100 Gossypium raimondii
Gorai.004G211200 Gossypium raimondii
Gorai.007G023200 Gossypium raimondii
Gorai.007G023300 Gossypium raimondii
Gorai.008G246200 Gossypium raimondii
Gorai.008G246300 Gossypium raimondii
GSVIVG01019768001 Vitis vinifera
HanXRQChr04g0109901 Helianthus annuus
HanXRQChr07g0187011 Helianthus annuus
HanXRQChr07g0187161 Helianthus annuus
HanXRQChr07g0187171 Helianthus annuus
HanXRQChr13g0393131 Helianthus annuus
HanXRQChr13g0393151 Helianthus annuus
HanXRQChr13g0393161 Helianthus annuus
HanXRQChr13g0393271 Helianthus annuus
HanXRQChr13g0394191 Helianthus annuus
HanXRQChr13g0394201 Helianthus annuus
HanXRQChr13g0394211 Helianthus annuus
HanXRQChr13g0394221 Helianthus annuus
HanXRQChr13g0394871 Helianthus annuus
Haze_08860 Corylus avellana
Hma1.2p1_2132F.1_g314760 Hydrangea macrophylla
HPP92_005046 Vanilla planifolia
HPP92_005067 Vanilla planifolia
Hund11481 Selenicereus undatus
Hund14778 Selenicereus undatus
Hund14780 Selenicereus undatus
Hund14782 Selenicereus undatus
Lalb_Chr09g0333351 Lupinus albus
Lalb_Chr16g0389931 Lupinus albus
Lj2A190G49 Lonicera japonica
Lj2C190T3 Lonicera japonica
Lj4g0009463 Lotus japonicus
Lj4g0020288 Lotus japonicus
Lsat_1_v5_gn_6_5961 Lactuca sativa
Lsat_1_v5_gn_6_6081 Lactuca sativa
Lsat_1_v5_gn_6_6101 Lactuca sativa
Lsat_1_v5_gn_6_6121 Lactuca sativa
Lsat_1_v5_gn_6_6141 Lactuca sativa
Lsat_1_v5_gn_6_6181 Lactuca sativa
Lsat_1_v5_gn_6_6201 Lactuca sativa
Lsat_1_v5_gn_6_6221 Lactuca sativa
Lsat_1_v5_gn_6_6241 Lactuca sativa
Lsat_1_v5_gn_6_6261 Lactuca sativa
Lsat_1_v5_gn_6_6281 Lactuca sativa
Lsat_1_v5_gn_7_64221 Lactuca sativa
Manes.01G062500 Manihot esculenta
Manes.01G062600 Manihot esculenta
Manes.02G022900 Manihot esculenta
Manes.02G023100 Manihot esculenta
Mapoly0019s0042 Marchantia polymorpha
Mapoly0020s0134 Marchantia polymorpha
MBI17_g38204_MAGBIO Magnolia biondii
MCO03G342 Micromonas commoda
MCO15G534 Micromonas commoda
MD06G1081000 Malus domestica
Medtr8g098420 Medicago truncatula
Medtr8g098430 Medicago truncatula
MELO3C016349.2 Cucumis melo
Migut.A00776 Erythranthe guttata
Migut.E01103 Erythranthe guttata
MSTRG.13836 Avicennia marina
MSTRG.1876 Avicennia marina
Nitab4.5_0001831g0050 Nicotiana tabacum
Nitab4.5_0002776g0080 Nicotiana tabacum
Nitab4.5_0005149g0040 Nicotiana tabacum
Nn1g01488 Nelumbo nucifera
Oeu042106.1 Olea europaea
Oeu059480.2 Olea europaea
Os11g0588300 Oryza sativa ssp. japonica
Peaxi162Scf00102g01533 Petunia axillaris
Peaxi162Scf00102g01558 Petunia axillaris
Peaxi162Scf00119g00529 Petunia axillaris
Peaxi162Scf00700g00038 Petunia axillaris
PGR031G2860 Punica granatum
PGSC0003DMG400004977 Solanum tuberosum
Phvul.002G288500 Phaseolus vulgaris
Phvul.002G288600 Phaseolus vulgaris
Potri.001G105600 Populus trichocarpa
Potri.003G125800 Populus trichocarpa
Pp3c26_14940 Physcomitrium patens
Pp3c7_26710 Physcomitrium patens
Pp3c7_5320 Physcomitrium patens
PRCOL_00003684 Prasinoderma coloniale
Prupe.5G098100 Prunus persica
Psat7g033760 Pisum sativum
Psat7g033800 Pisum sativum
PSO478G1195 Papaver somniferum
PSO478G2906 Papaver somniferum
PSO478G3123 Papaver somniferum
PSO478G3288 Papaver somniferum
PSO478G3454 Papaver somniferum
PSO478G4616 Papaver somniferum
PSO478G5075 Papaver somniferum
PSO782G0302 Papaver somniferum
PSO782G1343 Papaver somniferum
PSO782G1734 Papaver somniferum
PSO782G1903 Papaver somniferum
PSO782G3613 Papaver somniferum
PSO782G4158 Papaver somniferum
PSO782G4776 Papaver somniferum
PSO782G5119 Papaver somniferum
QL12p033589 Quercus lobata
RcHm_v2.0_Chr7g0198031 Rosa chinensis
RcHm_v2.0_Chr7g0198101 Rosa chinensis
Rhsim02G0228100 Rhododendron simsii
Sabra01G0080100 Salix brachista
Sabra03G0089300 Salix brachista
Sc01g0009500 Simmondsia chinensis
Sc07g0009690 Simmondsia chinensis
Sc07g0009700 Simmondsia chinensis
Sc10g0008360 Simmondsia chinensis
Sed0013646 Sechium edule
SGA_v2.0_scaffold385G50472 Striga asiatica
SMO367G0767 Selaginella moellendorffii
SMO367G0945 Selaginella moellendorffii
SMO367G1248 Selaginella moellendorffii
Solyc04g050560.4 Solanum lycopersicum
Solyc08g080900.3 Solanum lycopersicum
Solyc08g080910.3 Solanum lycopersicum
Solyc12g056250.2 Solanum lycopersicum
Sopen08g029200 Solanum pennellii
Sopen08g029220 Solanum pennellii
Sopen12g028770 Solanum pennellii
Sp7g00710 Schrenkiella parvula
SpUn0010_0190 Schrenkiella parvula
TAR629G0554 Trochodendron aralioides
THA.LOC104823580 Tarenaya hassleriana
Thecc.03G277200 Theobroma cacao
Thhalv10027900m.g Eutrema salsugineum
TPR.G12805 Trifolium pratense
TPR.G12850 Trifolium pratense
TWI81G0164 Tripterygium wilfordii
TWI81G0552 Tripterygium wilfordii
unitig_26.g9702 Utricularia gibba
vmacro11317 Vaccinium macrocarpon
vmacro13950 Vaccinium macrocarpon
vmacro23520 Vaccinium macrocarpon
VMungo0251G0244 Vigna mungo
VMungo0251G2356 Vigna mungo
Zm00001eb058380 Zea mays
Zm00001eb065360 Zea mays
Zm00001eb139950 Zea mays
Zm00001eb167510 Zea mays
Zm00001eb266670 Zea mays

User provided reference genes

Program Settings