Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65710 Brassica napus
A04p17130 Brassica napus
A06p04580 Brassica napus
A08p22920 Brassica napus
Aa31LG6G14820 Aethionema arabicum
Aa31LG7G14140 Aethionema arabicum
Aa31LG7G14160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3099 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3623 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3624 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3626 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_199.20 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.271 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.124 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1661 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.341 Anthoceros agrestis
Actinidia04117 Actinidia chinensis
Actinidia11925 Actinidia chinensis
Actinidia19606 Actinidia chinensis
Actinidia36376 Actinidia chinensis
Actinidia36377 Actinidia chinensis
Ah.02g129220 Amaranthus hybridus
AL4G12200 Arabidopsis lyrata
AL7G12750 Arabidopsis lyrata
AL7G13270 Arabidopsis lyrata
Aqoxy6G00635 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F9GNLP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KU7V2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2GM3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNQW91 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZD0NI5 Arachis hypogaea
AT2G22660 Arabidopsis thaliana
AT4G37682 Arabidopsis thaliana
AT4G37900 Arabidopsis thaliana
ATR0800G118 Amborella trichopoda
Atru.chr13.944 Acer truncatum
Atru.chr3.1151 Acer truncatum
Atru.chr3.1168 Acer truncatum
AUR62014334 Chenopodium quinoa
AUR62014335 Chenopodium quinoa
AUR62019077 Chenopodium quinoa
AUR62032878 Chenopodium quinoa
BcaB03g12326 Brassica carinata
BcaB05g24666 Brassica carinata
BcaB06g27814 Brassica carinata
BcaB07g33776 Brassica carinata
BcaB07g33777 Brassica carinata
BcaC01g00368 Brassica carinata
BcaC02g08627 Brassica carinata
BcaC08g43021 Brassica carinata
BcaC08g43022 Brassica carinata
BcaC08g43023 Brassica carinata
BcaNung03410 Brassica carinata
BolC3t20138H Brassica oleracea
BolC4t26766H Brassica oleracea
BolC6t35403H Brassica oleracea
BolC6t35404H Brassica oleracea
BolC6t35405H Brassica oleracea
BolC7t46687H Brassica oleracea
BraA03t15621Z Brassica rapa
BraA04t17342Z Brassica rapa
BraA06t23662Z Brassica rapa
BraA08t34254Z Brassica rapa
C03p78950 Brassica napus
C04p51940 Brassica napus
C06p02740 Brassica napus
C06p02750 Brassica napus
C06p02760 Brassica napus
C07p62730 Brassica napus
CAN.G1061.26 Capsicum annuum
CAN.G215.6 Capsicum annuum
CANSAT01G0583 Cannabis sativa
CARHR113920 Cardamine hirsuta
CARHR246300 Cardamine hirsuta
CARHR246310 Cardamine hirsuta
Carub.0004s0181 Capsella rubella
Carub.0007s0232 Capsella rubella
Carub.0008s0981 Capsella rubella
Ca_13471_v3 Cicer arietinum L.
Cc07_g07850 Coffea canephora
CDE04G0086 Ceratophyllum demersum
CDE04G2487 Ceratophyllum demersum
CDE06G1777 Ceratophyllum demersum
Cfa013829 Carpinus fangiana
Ciclev10024875m.g Citrus clementina
CiPaw.07G042400 Carya illinoinensis
CiPaw.07G161800 Carya illinoinensis
CiPaw.08G145400 Carya illinoinensis
CiPaw.08G145500 Carya illinoinensis
ClCG00G003360 Citrullus lanatus
ClCG10G002950 Citrullus lanatus
ClCG10G002960 Citrullus lanatus
COL.COLO4_11678 Corchorus olitorius
Cpa.g.sc755.1 Carica papaya
CsaV3_3G003000 Cucumis sativus L.
CSS0020341 Camellia sinensis var. sinensis
CSS0030408 Camellia sinensis var. sinensis
CSS0035578 Camellia sinensis var. sinensis
Dinv20731 Davidia involucrata
Dinv36977 Davidia involucrata
Dinv44885 Davidia involucrata
Duzib093G1484 Durio zibethinus
Duzib187G0808 Durio zibethinus
ECA232G1811 Erigeron canadensis
ECA232G2374 Erigeron canadensis
ECA238G1257 Erigeron canadensis
EL10Ac1g00686 Beta vulgaris
EL10Ac6g13303 Beta vulgaris
Eucgr.F02168 Eucalyptus grandis
Eucgr.I00602 Eucalyptus grandis
FAN04G0314 Fragaria x ananassa
FAN04G1356 Fragaria x ananassa
FAN08G1103 Fragaria x ananassa
FAN12G3069 Fragaria x ananassa
FAN18G3860 Fragaria x ananassa
FAN19G1400 Fragaria x ananassa
FAN19G2007 Fragaria x ananassa
FAN21G1419 Fragaria x ananassa
FAN21G1961 Fragaria x ananassa
FAN23G0853 Fragaria x ananassa
FAN25G1500 Fragaria x ananassa
FAN26G3252 Fragaria x ananassa
FAN28G1499 Fragaria x ananassa
FvH4_1g18970 Fragaria vesca
FvH4_5g33890 Fragaria vesca
Glyma.01G019800 Glycine max
Glyma.02G217400 Glycine max
Glyma.09G202600 Glycine max
Gohir.A02G146100 Gossypium hirsutum
Gohir.A06G074100 Gossypium hirsutum
Gohir.D03G034500 Gossypium hirsutum
Gorai.003G036200 Gossypium raimondii
Gorai.010G085100 Gossypium raimondii
GSVIVG01006770001 Vitis vinifera
HanXRQChr05g0157021 Helianthus annuus
HanXRQChr08g0228611 Helianthus annuus
HanXRQChr09g0262881 Helianthus annuus
HanXRQChr10g0316031 Helianthus annuus
HanXRQChr13g0408411 Helianthus annuus
HanXRQChr14g0447071 Helianthus annuus
Haze_03932 Corylus avellana
Haze_22501 Corylus avellana
Haze_22502 Corylus avellana
Hma1.2p1_0080F.1_g042110 Hydrangea macrophylla
HPP92_013293 Vanilla planifolia
Hund16613 Selenicereus undatus
Hund17246 Selenicereus undatus
Hund17247 Selenicereus undatus
Hund22628 Selenicereus undatus
Lalb_Chr16g0381481 Lupinus albus
Lj2g0000215 Lotus japonicus
Lj4A742T42 Lonicera japonica
Lj4C175G12 Lonicera japonica
LjContig00408g0014186 Lotus japonicus
Lsat_1_v5_gn_1_110400 Lactuca sativa
Lsat_1_v5_gn_1_37420 Lactuca sativa
Lsat_1_v5_gn_2_82201 Lactuca sativa
Lsat_1_v5_gn_2_91220 Lactuca sativa
Lsat_1_v5_gn_4_158180 Lactuca sativa
Manes.05G187500 Manihot esculenta
Manes.12G121200 Manihot esculenta
Manes.13G104100 Manihot esculenta
Mapoly0004s0179 Marchantia polymorpha
Mapoly0016s0113 Marchantia polymorpha
Mapoly0019s0181 Marchantia polymorpha
Mapoly0085s0024 Marchantia polymorpha
Mapoly0135s0047 Marchantia polymorpha
Mapoly0135s0048 Marchantia polymorpha
Mapoly0150s0006 Marchantia polymorpha
Mapoly0165s0026 Marchantia polymorpha
Mapoly1840s0001 Marchantia polymorpha
Mapoly2623s0001 Marchantia polymorpha
MBI16_g36499_MAGBIO Magnolia biondii
MBI16_g37794_MAGBIO Magnolia biondii
MBI16_g44750_MAGBIO Magnolia biondii
MCO03G253 Micromonas commoda
MCO09G170 Micromonas commoda
MCO09G412 Micromonas commoda
MD01G1044900 Malus domestica
MD08G1208800 Malus domestica
MD08G1209100 Malus domestica
Medtr5g030890 Medicago truncatula
MELO3C013963.2 Cucumis melo
Migut.H00293 Erythranthe guttata
Migut.L00448 Erythranthe guttata
MSTRG.3507 Avicennia marina
Nitab4.5_0000036g0420 Nicotiana tabacum
Nitab4.5_0000291g0070 Nicotiana tabacum
Nitab4.5_0002135g0020 Nicotiana tabacum
Nitab4.5_0002713g0020 Nicotiana tabacum
Nn1g05525 Nelumbo nucifera
Nn3g18983 Nelumbo nucifera
Nn5g29774 Nelumbo nucifera
Os11g0621300 Oryza sativa ssp. japonica
Peaxi162Scf00703g00231 Petunia axillaris
Peaxi162Scf00943g00417 Petunia axillaris
PGR031G2118 Punica granatum
PGR102G1313 Punica granatum
PGR102G2208 Punica granatum
PGR102G2445 Punica granatum
PGSC0003DMG400010387 Solanum tuberosum
PGSC0003DMG400030615 Solanum tuberosum
Phvul.002G143100 Phaseolus vulgaris
Phvul.008G184500 Phaseolus vulgaris
Potri.002G108900 Populus trichocarpa
Potri.015G042800 Populus trichocarpa
Pp3c12_24320 Physcomitrium patens
Pp3c21_5400 Physcomitrium patens
Prupe.1G539900 Prunus persica
Prupe.6G209600 Prunus persica
Psat2g129000 Pisum sativum
Psat2g134480 Pisum sativum
Psat7g095000 Pisum sativum
PSO210G0325 Papaver somniferum
PSO210G6445 Papaver somniferum
QL06p037430 Quercus lobata
QL12p039990 Quercus lobata
RcHm_v2.0_Chr2g0109991 Rosa chinensis
RcHm_v2.0_Chr7g0233251 Rosa chinensis
RcHm_v2.0_Chr7g0233261 Rosa chinensis
Rhsim04G0250100 Rhododendron simsii
Rhsim07G0172500 Rhododendron simsii
Sabra02G0085700 Salix brachista
Sabra15G0042600 Salix brachista
Sabra15G0043900 Salix brachista
Sabra15G0049300 Salix brachista
SalBow3G1036 Salvia bowleyana
SalBow3G1385 Salvia bowleyana
SalBow3G3065 Salvia bowleyana
Sc03g0000580 Simmondsia chinensis
Sc26g0003140 Simmondsia chinensis
Sc26g0003160 Simmondsia chinensis
Sed0010498 Sechium edule
SEGI_10955 Sequoiadendron giganteum
SEGI_10997 Sequoiadendron giganteum
SEGI_21350 Sequoiadendron giganteum
SEGI_25558 Sequoiadendron giganteum
SEGI_28620 Sequoiadendron giganteum
SGA_v2.0_scaffold149G36515 Striga asiatica
SMO351G0637 Selaginella moellendorffii
Solyc02g063450.4 Solanum lycopersicum
Solyc02g091650.4 Solanum lycopersicum
Sopen02g014540 Solanum pennellii
Sopen02g036260 Solanum pennellii
Sp1g35220 Schrenkiella parvula
Sp4g01683 Schrenkiella parvula
Sp7g35540 Schrenkiella parvula
TAR376G0018 Trochodendron aralioides
TAR381G1305 Trochodendron aralioides
TAR381G1618 Trochodendron aralioides
THA.LOC104804185 Tarenaya hassleriana
THA.LOC104807659 Tarenaya hassleriana
Thecc.01G083700 Theobroma cacao
Thhalv10000046m.g Eutrema salsugineum
Thhalv10012182m.g Eutrema salsugineum
Thhalv10024448m.g Eutrema salsugineum
TPR.G37027 Trifolium pratense
TWI56G0280 Tripterygium wilfordii
TWI74G1198 Tripterygium wilfordii
vmacro05519 Vaccinium macrocarpon
VMungo0647G0151 Vigna mungo
VMungo1215G2859 Vigna mungo
Zm00001eb166550 Zea mays

User provided reference genes

Program Settings