Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17200 Brassica napus
A08p29810 Brassica napus
Aa31LG1G15290 Aethionema arabicum
Aa31LG6G13460 Aethionema arabicum
Aa31LG7G4090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3823 Anthoceros agrestis
Actinidia15318 Actinidia chinensis
Actinidia22554 Actinidia chinensis
Actinidia25336 Actinidia chinensis
Actinidia36548 Actinidia chinensis
Ah.03g139460 Amaranthus hybridus
AL1G31980 Arabidopsis lyrata
AL7G14350 Arabidopsis lyrata
AL8G43240 Arabidopsis lyrata
Aqoxy6G01070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DN4PT9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DZY671 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5AA1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8TE87 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NXES65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TI5GXM Arachis hypogaea
AT1G19380 Arabidopsis thaliana
AT4G36660 Arabidopsis thaliana
AT5G65650 Arabidopsis thaliana
ATR0733G200 Amborella trichopoda
Atru.chr13.499 Acer truncatum
Atru.chr3.552 Acer truncatum
AUR62003168 Chenopodium quinoa
AUR62007986 Chenopodium quinoa
BcaB01g01792 Brassica carinata
BcaB02g09995 Brassica carinata
BcaB03g12915 Brassica carinata
BcaB04g20105 Brassica carinata
BcaC06g34738 Brassica carinata
BcaNung00713 Brassica carinata
BcaNung04430 Brassica carinata
BolC7t43037H Brassica oleracea
BolC8t49569H Brassica oleracea
BraA01t00211Z Brassica rapa
BraA03t15505Z Brassica rapa
BraA07t29447Z Brassica rapa
BraA08t34916Z Brassica rapa
C07p25060 Brassica napus
C08p19440 Brassica napus
CAN.G1028.4 Capsicum annuum
CAN.G1126.52 Capsicum annuum
CAN.G358.111 Capsicum annuum
CANSAT01G2790 Cannabis sativa
CANSAT25G2607 Cannabis sativa
CARHR019970 Cardamine hirsuta
CARHR245010 Cardamine hirsuta
CARHR280970 Cardamine hirsuta
Carub.0001s1897 Capsella rubella
Carub.0007s0366 Capsella rubella
Ca_00388_v3 Cicer arietinum L.
Ca_15518_v3 Cicer arietinum L.
Cc07_g09320 Coffea canephora
Cc10_g03020 Coffea canephora
CDE04G0045 Ceratophyllum demersum
CDE07G0861 Ceratophyllum demersum
Cfa004290 Carpinus fangiana
Cfa018142 Carpinus fangiana
Ciclev10027139m.g Citrus clementina
CiPaw.01G036000 Carya illinoinensis
CiPaw.02G015900 Carya illinoinensis
CiPaw.15G077100 Carya illinoinensis
CiPaw.16G055700 Carya illinoinensis
ClCG01G019440 Citrullus lanatus
ClCG08G015200 Citrullus lanatus
COL.COLO4_22102 Corchorus olitorius
COL.COLO4_26332 Corchorus olitorius
Cpa.g.sc544.4 Carica papaya
Cpa.g.sc64.80 Carica papaya
CsaV3_2G028610 Cucumis sativus L.
CsaV3_6G046150 Cucumis sativus L.
CSS0003250 Camellia sinensis var. sinensis
CSS0015114 Camellia sinensis var. sinensis
CSS0018931 Camellia sinensis var. sinensis
CSS0035416 Camellia sinensis var. sinensis
DCAR_008761 Daucus carota
DCAR_012744 Daucus carota
DCAR_017257 Daucus carota
DCAR_025923 Daucus carota
Dinv26820 Davidia involucrata
Dinv36070 Davidia involucrata
Dinv39409 Davidia involucrata
Duzib093G1976 Durio zibethinus
Duzib116G0079 Durio zibethinus
Duzib147G0895 Durio zibethinus
Duzib187G0654 Durio zibethinus
Duzib264G0162 Durio zibethinus
ECA238G2451 Erigeron canadensis
ECA246G4905 Erigeron canadensis
EL10Ac1g00828 Beta vulgaris
EL10Ac5g12251 Beta vulgaris
EL10Ac6g14925 Beta vulgaris
EL10Ac6g14932 Beta vulgaris
EL10Ac7g16257 Beta vulgaris
EL10Ac8g19021 Beta vulgaris
Eucgr.F01557 Eucalyptus grandis
Eucgr.H01264 Eucalyptus grandis
Eucgr.L00342 Eucalyptus grandis
FAN15G3285 Fragaria x ananassa
FAN19G2698 Fragaria x ananassa
FAN20G1970 Fragaria x ananassa
FAN23G2744 Fragaria x ananassa
FAN26G2804 Fragaria x ananassa
FAN27G1553 Fragaria x ananassa
FvH4_1g13540 Fragaria vesca
FvH4_2g39930 Fragaria vesca
Glyma.01G174700 Glycine max
Glyma.02G057900 Glycine max
Glyma.04G032800 Glycine max
Glyma.11G066800 Glycine max
Glyma.14G075900 Glycine max
Glyma.17G249800 Glycine max
Gohir.A02G164400 Gossypium hirsutum
Gohir.A05G194900 Gossypium hirsutum
Gohir.A06G010600 Gossypium hirsutum
Gohir.A11G185500 Gossypium hirsutum
Gohir.D03G015700 Gossypium hirsutum
Gohir.D05G198100 Gossypium hirsutum
Gohir.D06G008000 Gossypium hirsutum
Gohir.D11G191900 Gossypium hirsutum
Gorai.003G015900 Gossypium raimondii
Gorai.007G204600 Gossypium raimondii
Gorai.009G203200 Gossypium raimondii
Gorai.010G010700 Gossypium raimondii
GSVIVG01009694001 Vitis vinifera
GSVIVG01018986001 Vitis vinifera
HanXRQChr05g0151861 Helianthus annuus
HanXRQChr06g0179101 Helianthus annuus
HanXRQChr09g0262101 Helianthus annuus
HanXRQChr14g0441231 Helianthus annuus
HanXRQChr15g0495241 Helianthus annuus
HanXRQChr17g0560671 Helianthus annuus
Haze_15110 Corylus avellana
Haze_17981 Corylus avellana
Hma1.2p1_0203F.1_g086430 Hydrangea macrophylla
Hma1.2p1_0469F.1_g159150 Hydrangea macrophylla
Hma1.2p1_0581F.1_g182980 Hydrangea macrophylla
Hma1.2p1_0717F.1_g208230 Hydrangea macrophylla
HPP92_007729 Vanilla planifolia
HPP92_023604 Vanilla planifolia
Hund14145 Selenicereus undatus
Hund16585 Selenicereus undatus
Lalb_Chr05g0212891 Lupinus albus
Lalb_Chr09g0322531 Lupinus albus
Lalb_Chr14g0369181 Lupinus albus
Lj2C450T6 Lonicera japonica
Lj2g0021184 Lotus japonicus
Lj4A199T82 Lonicera japonica
Lj4A41G59 Lonicera japonica
Lsat_1_v5_gn_2_76660 Lactuca sativa
Lsat_1_v5_gn_4_150840 Lactuca sativa
Lsat_1_v5_gn_5_29201 Lactuca sativa
Lsat_1_v5_gn_8_96240 Lactuca sativa
Manes.01G133800 Manihot esculenta
Manes.02G092100 Manihot esculenta
Manes.05G161100 Manihot esculenta
MBI16_g15413_MAGBIO Magnolia biondii
MBI16_g37703_MAGBIO Magnolia biondii
MD02G1150600 Malus domestica
MD08G1034200 Malus domestica
MD15G1031100 Malus domestica
MD15G1265200 Malus domestica
Medtr3g111800 Medicago truncatula
Medtr5g019900 Medicago truncatula
MELO3C007818.2 Cucumis melo
MELO3C010933.2 Cucumis melo
Migut.C00713 Erythranthe guttata
Migut.H01004 Erythranthe guttata
MSTRG.1285 Avicennia marina
MSTRG.25163 Avicennia marina
MSTRG.3586 Avicennia marina
Nitab4.5_0000110g0540 Nicotiana tabacum
Nitab4.5_0000628g0010 Nicotiana tabacum
Nitab4.5_0001038g0120 Nicotiana tabacum
Nitab4.5_0001279g0010 Nicotiana tabacum
Nitab4.5_0001466g0090 Nicotiana tabacum
Nitab4.5_0001827g0020 Nicotiana tabacum
Nitab4.5_0003783g0030 Nicotiana tabacum
Nn1g05054 Nelumbo nucifera
Nn5g29554 Nelumbo nucifera
Oeu038418.1 Olea europaea
Oeu056186.1 Olea europaea
Os03g0411600 Oryza sativa ssp. japonica
Os07g0607500 Oryza sativa ssp. japonica
Peaxi162Scf00515g00315 Petunia axillaris
Peaxi162Scf00690g00215 Petunia axillaris
Peaxi162Scf00751g00412 Petunia axillaris
PGR083G0103 Punica granatum
PGR119G2568 Punica granatum
PGSC0003DMG400005160 Solanum tuberosum
PGSC0003DMG400014898 Solanum tuberosum
PGSC0003DMG400015090 Solanum tuberosum
PGSC0003DMG400017789 Solanum tuberosum
Phvul.002G028800 Phaseolus vulgaris
Phvul.003G252600 Phaseolus vulgaris
Phvul.009G057300 Phaseolus vulgaris
Potri.005G125000 Populus trichocarpa
Potri.007G027700 Populus trichocarpa
Potri.014G181600 Populus trichocarpa
Prupe.1G380800 Prunus persica
Prupe.6G064600 Prunus persica
Prupe.7G152400 Prunus persica
Psat0s3731g0080 Pisum sativum
Psat2g160760 Pisum sativum
PSO170G4517 Papaver somniferum
PSO541G3587 Papaver somniferum
PSO675G7251 Papaver somniferum
QL02p008016 Quercus lobata
QL06p045626 Quercus lobata
RcHm_v2.0_Chr2g0101931 Rosa chinensis
RcHm_v2.0_Chr6g0300851 Rosa chinensis
Sabra05G0102600 Salix brachista
Sabra14G0141700 Salix brachista
SalBow5G3835 Salvia bowleyana
SalBow7G4481 Salvia bowleyana
Sc03g0000800 Simmondsia chinensis
Sed0012521 Sechium edule
Sed0014674 Sechium edule
Sed0016352 Sechium edule
SEGI_20612 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10233 Striga asiatica
SGA_v2.0_scaffold482G52338 Striga asiatica
Solyc02g085480.4 Solanum lycopersicum
Solyc03g034090.3 Solanum lycopersicum
Solyc04g080230.3 Solanum lycopersicum
Sopen02g030160 Solanum pennellii
Sopen03g006870 Solanum pennellii
Sopen04g033810 Solanum pennellii
Sp1g17290 Schrenkiella parvula
Sp2g29950 Schrenkiella parvula
TAR376G0555 Trochodendron aralioides
TAR628G0968 Trochodendron aralioides
TAR628G1152 Trochodendron aralioides
THA.LOC104806349 Tarenaya hassleriana
THA.LOC104807445 Tarenaya hassleriana
THA.LOC104809062 Tarenaya hassleriana
THA.LOC104821281 Tarenaya hassleriana
THA.LOC104826929 Tarenaya hassleriana
Thecc.01G038100 Theobroma cacao
Thecc.08G025100 Theobroma cacao
Thhalv10004972m.g Eutrema salsugineum
Thhalv10008999m.g Eutrema salsugineum
Thhalv10026362m.g Eutrema salsugineum
TPR.G12500 Trifolium pratense
TPR.G28683 Trifolium pratense
TWI12G0534 Tripterygium wilfordii
TWI53G0626 Tripterygium wilfordii
TWI56G0895 Tripterygium wilfordii
TWI73G1255 Tripterygium wilfordii
unitig_32.g11134 Utricularia gibba
unitig_37.g12367 Utricularia gibba
unitig_85.g27237 Utricularia gibba
vmacro12722 Vaccinium macrocarpon
vmacro21633 Vaccinium macrocarpon
VMungo0251G1453 Vigna mungo
VMungo1215G3241 Vigna mungo
VMungo1309G0368 Vigna mungo
Zm00001eb108720 Zea mays
Zm00001eb393020 Zea mays

User provided reference genes

Program Settings