Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21410 Brassica napus
A09p46170 Brassica napus
Aa31LG10G8350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.740 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.744 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.745 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.424 Anthoceros agrestis
Actinidia28922 Actinidia chinensis
Ah.15g091400 Amaranthus hybridus
AL5G34060 Arabidopsis lyrata
Aqoxy195s007 Aquilegia oxysepala
Aqoxy1G01087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7710RN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7YQ2TW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SIB7C5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YR6AFM Arachis hypogaea
AT3G53180 Arabidopsis thaliana
ATR0043G008 Amborella trichopoda
Atru.chr8.1743 Acer truncatum
AUR62026959 Chenopodium quinoa
AUR62041382 Chenopodium quinoa
BcaB01g00304 Brassica carinata
BcaC07g39674 Brassica carinata
BcaC08g44624 Brassica carinata
BolC6t37286H Brassica oleracea
BolC8t50450H Brassica oleracea
BraA07t29828Z Brassica rapa
BraA09t40081Z Brassica rapa
C06p21020 Brassica napus
C08p28400 Brassica napus
CAN.G1006.10 Capsicum annuum
CAN.G1138.22 Capsicum annuum
CAN.G541.44 Capsicum annuum
CAN.G541.45 Capsicum annuum
CANSAT35G1791 Cannabis sativa
CANSAT80G1527 Cannabis sativa
CANSAT80G2890 Cannabis sativa
CARHR060240 Cardamine hirsuta
CARHR163130 Cardamine hirsuta
Carub.0005s1971 Capsella rubella
Ca_05180_v3 Cicer arietinum L.
Ca_11569_v3 Cicer arietinum L.
CBR_g37575 Chara braunii
CBR_g51531 Chara braunii
Cc06_g04600 Coffea canephora
Cfa021472 Carpinus fangiana
Cfa022823 Carpinus fangiana
Cfa024801 Carpinus fangiana
Cfa026822 Carpinus fangiana
Ciclev10011061m.g Citrus clementina
CiPaw.09G003100 Carya illinoinensis
ClCG00G005960 Citrullus lanatus
ClCG00G006000 Citrullus lanatus
ClCG04G009500 Citrullus lanatus
ClCG04G009510 Citrullus lanatus
COL.COLO4_26904 Corchorus olitorius
Cpa.g.sc5.155 Carica papaya
Cre03.g146627 Chlamydomonas reinhardtii
CsaV3_6G040120 Cucumis sativus L.
CsaV3_6G040130 Cucumis sativus L.
CSS0049154 Camellia sinensis var. sinensis
DCAR_015012 Daucus carota
Dinv35818 Davidia involucrata
Dinv37345 Davidia involucrata
Duzib093G2252 Durio zibethinus
ECA233G1422 Erigeron canadensis
EL10Ac7g16696 Beta vulgaris
Eucgr.A01617 Eucalyptus grandis
FAN02G4184 Fragaria x ananassa
FAN05G4117 Fragaria x ananassa
FAN05G4263 Fragaria x ananassa
FAN09G3171 Fragaria x ananassa
FAN14G4746 Fragaria x ananassa
FvH4_6g16930 Fragaria vesca
Glyma.10G060100 Glycine max
Glyma.10G060200 Glycine max
Glyma.13G146751 Glycine max
Gohir.A04G069800 Gossypium hirsutum
Gohir.D01G129800 Gossypium hirsutum
Gohir.D03G082900 Gossypium hirsutum
Gohir.D04G108400 Gossypium hirsutum
Gohir.D05G325701 Gossypium hirsutum
Gohir.D06G163101 Gossypium hirsutum
Gohir.D13G165733 Gossypium hirsutum
Gorai.002G160800 Gossypium raimondii
Gorai.005G094900 Gossypium raimondii
Gorai.008G052500 Gossypium raimondii
Gorai.009G349900 Gossypium raimondii
Gorai.009G412500 Gossypium raimondii
Gorai.011G171800 Gossypium raimondii
GSVIVG01033692001 Vitis vinifera
HanXRQChr05g0144531 Helianthus annuus
HanXRQChr05g0144541 Helianthus annuus
Haze_19443 Corylus avellana
Hma1.2p1_0547F.1_g176480 Hydrangea macrophylla
HPP92_008392 Vanilla planifolia
Hund20555 Selenicereus undatus
Lalb_Chr02g0155471 Lupinus albus
Lalb_Chr02g0155491 Lupinus albus
Lalb_Chr21g0315141 Lupinus albus
Lalb_Chr21g0315151 Lupinus albus
Lalb_Chr21g0315161 Lupinus albus
Lj3A991G23 Lonicera japonica
Lj3C991T4 Lonicera japonica
Lj5g0002795 Lotus japonicus
Lj5g0007956 Lotus japonicus
Lsat_1_v5_gn_8_145640 Lactuca sativa
Manes.08G013600 Manihot esculenta
Manes.08G013700 Manihot esculenta
Mapoly0010s0006 Marchantia polymorpha
Mapoly0093s0034 Marchantia polymorpha
Mapoly0140s0025 Marchantia polymorpha
MBI17_g25733_MAGBIO Magnolia biondii
MD00G1214800 Malus domestica
MD13G1277900 Malus domestica
Medtr0417s0020 Medicago truncatula
Medtr1g062410 Medicago truncatula
Medtr1g062430 Medicago truncatula
Medtr1g062470 Medicago truncatula
Medtr1g062620 Medicago truncatula
Medtr1g062650 Medicago truncatula
Medtr1g062710 Medicago truncatula
Medtr3g035860 Medicago truncatula
Medtr3g035970 Medicago truncatula
MELO3C024485.2 Cucumis melo
MELO3C024486.2 Cucumis melo
Migut.L01723 Erythranthe guttata
MSTRG.26675 Avicennia marina
Nitab4.5_0000132g0100 Nicotiana tabacum
Nitab4.5_0000132g0480 Nicotiana tabacum
Nitab4.5_0000181g0090 Nicotiana tabacum
Nitab4.5_0000217g0050 Nicotiana tabacum
Nitab4.5_0000217g0060 Nicotiana tabacum
Nitab4.5_0000963g0030 Nicotiana tabacum
Nitab4.5_0001786g0030 Nicotiana tabacum
Nitab4.5_0003388g0010 Nicotiana tabacum
Nitab4.5_0003945g0140 Nicotiana tabacum
Nitab4.5_0003945g0150 Nicotiana tabacum
Nitab4.5_0003945g0160 Nicotiana tabacum
Nitab4.5_0003945g0170 Nicotiana tabacum
Nitab4.5_0004314g0020 Nicotiana tabacum
Nitab4.5_0005208g0050 Nicotiana tabacum
Nitab4.5_0007292g0030 Nicotiana tabacum
Nitab4.5_0008230g0010 Nicotiana tabacum
Nitab4.5_0008230g0030 Nicotiana tabacum
Nitab4.5_0008265g0020 Nicotiana tabacum
Nn6g35210 Nelumbo nucifera
Oeu041475.1 Olea europaea
Os10g0456500 Oryza sativa ssp. japonica
Peaxi162Scf00110g00034 Petunia axillaris
Peaxi162Scf00110g00514 Petunia axillaris
Peaxi162Scf00110g00619 Petunia axillaris
Peaxi162Scf00163g00216 Petunia axillaris
Peaxi162Scf00247g00105 Petunia axillaris
Peaxi162Scf00247g00111 Petunia axillaris
Peaxi162Scf00247g01011 Petunia axillaris
Peaxi162Scf00529g00035 Petunia axillaris
Peaxi162Scf00529g00036 Petunia axillaris
Peaxi162Scf00780g01013 Petunia axillaris
Peaxi162Scf00780g01019 Petunia axillaris
Peaxi162Scf00837g00009 Petunia axillaris
Peaxi162Scf00837g00515 Petunia axillaris
Peaxi162Scf00958g00520 Petunia axillaris
Peaxi162Scf02002g00013 Petunia axillaris
PGR004G2132 Punica granatum
PGSC0003DMG400019011 Solanum tuberosum
PGSC0003DMG400019013 Solanum tuberosum
PGSC0003DMG400019014 Solanum tuberosum
PGSC0003DMG400028171 Solanum tuberosum
PGSC0003DMG400028276 Solanum tuberosum
PGSC0003DMG400028277 Solanum tuberosum
PGSC0003DMG401009595 Solanum tuberosum
PGSC0003DMG401019012 Solanum tuberosum
PGSC0003DMG402009595 Solanum tuberosum
PGSC0003DMG403009595 Solanum tuberosum
Phvul.007G152300 Phaseolus vulgaris
Phvul.007G152500 Phaseolus vulgaris
Potri.006G121000 Populus trichocarpa
Pp3c14_19260 Physcomitrium patens
Pp3c1_32960 Physcomitrium patens
Pp3c20_2470 Physcomitrium patens
Pp3c21_9940 Physcomitrium patens
Pp3c22_1270 Physcomitrium patens
Pp3c26_11640 Physcomitrium patens
PRCOL_00005521 Prasinoderma coloniale
Prupe.7G124800 Prunus persica
Psat0s3029g0040 Pisum sativum
Psat6g071560 Pisum sativum
Psat6g074480 Pisum sativum
Psat6g075640 Pisum sativum
Psat6g075680 Pisum sativum
Psat6g075720 Pisum sativum
Psat6g076360 Pisum sativum
PSO063G7003 Papaver somniferum
PSO339G5475 Papaver somniferum
QL07p042117 Quercus lobata
QL07p042139 Quercus lobata
RcHm_v2.0_Chr3g0470971 Rosa chinensis
RcHm_v2.0_Chr5g0018301 Rosa chinensis
RcHm_v2.0_Chr6g0260941 Rosa chinensis
Rhsim03G0088700 Rhododendron simsii
Sabra06G0095200 Salix brachista
SalBow5G3646 Salvia bowleyana
SalBow5G4367 Salvia bowleyana
Sc20g0005720 Simmondsia chinensis
Sed0002653 Sechium edule
Sed0005462 Sechium edule
Sed0005893 Sechium edule
Sed0020289 Sechium edule
Sed0022969 Sechium edule
Sed0026659 Sechium edule
SEGI_20454 Sequoiadendron giganteum
SGA_v2.0_scaffold224G42925 Striga asiatica
SHI27836 Sapria himalayana
SHI27837 Sapria himalayana
SHI27841 Sapria himalayana
SMO356G0713 Selaginella moellendorffii
SMO367G0811 Selaginella moellendorffii
Solyc01g056380.1 Solanum lycopersicum
Solyc01g056390.1 Solanum lycopersicum
Solyc01g056400.1 Solanum lycopersicum
Solyc01g056410.1 Solanum lycopersicum
Solyc01g056430.2 Solanum lycopersicum
Solyc01g056440.1 Solanum lycopersicum
Solyc01g056450.3 Solanum lycopersicum
Solyc06g011290.3 Solanum lycopersicum
Solyc06g011320.2 Solanum lycopersicum
Solyc06g011330.3 Solanum lycopersicum
Solyc10g083550.1 Solanum lycopersicum
Solyc10g083840.1 Solanum lycopersicum
Solyc10g083850.3 Solanum lycopersicum
Sopen01g019520 Solanum pennellii
Sopen01g019530 Solanum pennellii
Sopen01g025450 Solanum pennellii
Sopen01g025490 Solanum pennellii
Sopen01g025510 Solanum pennellii
Sopen06g005510 Solanum pennellii
Sopen08g012650 Solanum pennellii
Sopen10g033020 Solanum pennellii
Sopen10g033280 Solanum pennellii
Sopen10g033290 Solanum pennellii
Sp5g09150 Schrenkiella parvula
TAR369G0251 Trochodendron aralioides
THA.LOC104825825 Tarenaya hassleriana
Thecc.05G072300 Theobroma cacao
Thhalv10010120m.g Eutrema salsugineum
TPR.G21005 Trifolium pratense
TPR.G21013 Trifolium pratense
TPR.G30717 Trifolium pratense
TWI53G0795 Tripterygium wilfordii
unitig_0.g678 Utricularia gibba
unitig_8.g4719 Utricularia gibba
vmacro07324 Vaccinium macrocarpon
VMungo0331G1282 Vigna mungo
VMungo0720G0437 Vigna mungo
VMungo0720G1363 Vigna mungo
VMungo0720G3162 Vigna mungo
Zm00001eb031620 Zea mays
Zm00001eb046790 Zea mays
Zm00001eb056640 Zea mays
Zm00001eb059870 Zea mays
Zm00001eb162900 Zea mays
Zm00001eb320250 Zea mays
Zm00001eb398810 Zea mays

User provided reference genes

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