Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24870 Brassica napus
A03p26080 Brassica napus
Aa31LG1G29180 Aethionema arabicum
Aa31LG5G2190 Aethionema arabicum
Actinidia00673 Actinidia chinensis
Actinidia00674 Actinidia chinensis
Actinidia02760 Actinidia chinensis
Actinidia02761 Actinidia chinensis
Actinidia02762 Actinidia chinensis
Actinidia21062 Actinidia chinensis
Actinidia24843 Actinidia chinensis
Actinidia28538 Actinidia chinensis
Actinidia28539 Actinidia chinensis
Actinidia32248 Actinidia chinensis
Actinidia32249 Actinidia chinensis
Actinidia32250 Actinidia chinensis
Ah.15g093860 Amaranthus hybridus
AL4G47410 Arabidopsis lyrata
AL6G50490 Arabidopsis lyrata
Aqoxy5G00699 Aquilegia oxysepala
Aqoxy5G00702 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5I5ID6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66ANXA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6G1AZV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.INQ3MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0WASJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea
AT2G47830 Arabidopsis thaliana
AT4G02560 Arabidopsis thaliana
ATR0706G146 Amborella trichopoda
ATR0706G272 Amborella trichopoda
Atru.chr5.1230 Acer truncatum
Atru.chr5.1231 Acer truncatum
Atru.chr5.1232 Acer truncatum
AUR62033190 Chenopodium quinoa
AUR62033191 Chenopodium quinoa
AUR62033197 Chenopodium quinoa
AUR62043263 Chenopodium quinoa
AUR62043270 Chenopodium quinoa
BcaB01g02031 Brassica carinata
BcaB01g03155 Brassica carinata
BcaB05g23644 Brassica carinata
BcaC01g05016 Brassica carinata
BcaC03g16147 Brassica carinata
BcaC04g23997 Brassica carinata
BolC2t09940H Brassica oleracea
BolC3t15458H Brassica oleracea
BraA02t07474Z Brassica rapa
BraA03t11823Z Brassica rapa
C02p39290 Brassica napus
C03p31100 Brassica napus
CAN.G1562.6 Capsicum annuum
CAN.G1562.7 Capsicum annuum
CANSAT25G2282 Cannabis sativa
CANSAT25G3369 Cannabis sativa
CARHR055860 Cardamine hirsuta
CARHR143220 Cardamine hirsuta
CARHR220570 Cardamine hirsuta
CARHR250850 Cardamine hirsuta
Carub.0004s3055 Capsella rubella
Carub.0006s3458 Capsella rubella
Ca_09134_v3 Cicer arietinum L.
Ca_10357_v3 Cicer arietinum L.
CBR_g48344 Chara braunii
CBR_g48346 Chara braunii
Cc01_g20510 Coffea canephora
Cc01_g20520 Coffea canephora
CDE02G2579 Ceratophyllum demersum
CDE05G3083 Ceratophyllum demersum
CDE11G0231 Ceratophyllum demersum
Cfa003705 Carpinus fangiana
Cfa005987 Carpinus fangiana
Cfa024758 Carpinus fangiana
Ciclev10006598m.g Citrus clementina
Ciclev10018617m.g Citrus clementina
Ciclev10019856m.g Citrus clementina
CiPaw.07G103600 Carya illinoinensis
CiPaw.07G103700 Carya illinoinensis
ClCG09G006190 Citrullus lanatus
ClCG09G006200 Citrullus lanatus
COL.COLO4_07998 Corchorus olitorius
Cpa.g.sc9.189 Carica papaya
Cpa.g.sc9.190 Carica papaya
CsaV3_7G028930 Cucumis sativus L.
CsaV3_7G028940 Cucumis sativus L.
CSS0004593 Camellia sinensis var. sinensis
CSS0018114 Camellia sinensis var. sinensis
DCAR_012404 Daucus carota
DCAR_017872 Daucus carota
DCAR_018344 Daucus carota
Dinv19731 Davidia involucrata
Dinv19733 Davidia involucrata
Dinv33021 Davidia involucrata
Duzib133G0811 Durio zibethinus
Duzib133G1109 Durio zibethinus
Duzib133G1128 Durio zibethinus
Duzib138G0932 Durio zibethinus
ECA236G0908 Erigeron canadensis
ECA248G3501 Erigeron canadensis
EL10Ac7g17491 Beta vulgaris
EL10Ac7g17517 Beta vulgaris
Eucgr.H01191 Eucalyptus grandis
Eucgr.H01192 Eucalyptus grandis
Eucgr.K03452 Eucalyptus grandis
FAN15G0803 Fragaria x ananassa
FAN15G3695 Fragaria x ananassa
FAN19G1365 Fragaria x ananassa
FAN20G1419 Fragaria x ananassa
FAN20G2691 Fragaria x ananassa
FAN24G0094 Fragaria x ananassa
FAN24G0883 Fragaria x ananassa
FAN27G3038 Fragaria x ananassa
FvH4_2g25100 Fragaria vesca
FvH4_c6g00080 Fragaria vesca
FvH4_c6g00110 Fragaria vesca
Glyma.02G153800 Glycine max
Glyma.03G211500 Glycine max
Glyma.10G020300 Glycine max
Glyma.19G208700 Glycine max
Gohir.A08G074400 Gossypium hirsutum
Gohir.A08G074500 Gossypium hirsutum
Gohir.D08G083700 Gossypium hirsutum
Gohir.D08G083800 Gossypium hirsutum
Gorai.004G088100 Gossypium raimondii
Gorai.004G088200 Gossypium raimondii
GSVIVG01010967001 Vitis vinifera
GSVIVG01010968001 Vitis vinifera
HanXRQChr01g0001661 Helianthus annuus
HanXRQChr04g0118111 Helianthus annuus
Haze_04858 Corylus avellana
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla
HPP92_011840 Vanilla planifolia
HPP92_025217 Vanilla planifolia
Hund05401 Selenicereus undatus
Hund18109 Selenicereus undatus
Lalb_Chr06g0163361 Lupinus albus
Lalb_Chr15g0078671 Lupinus albus
Lalb_Chr18g0047261 Lupinus albus
Lalb_Chr18g0047271 Lupinus albus
Lj1g0027200 Lotus japonicus
Lj2A1188T56 Lonicera japonica
Lj2C1188T12 Lonicera japonica
Lj2C1189T5 Lonicera japonica
Lj5g0023248 Lotus japonicus
Lsat_1_v5_gn_0_19060 Lactuca sativa
Lsat_1_v5_gn_5_189341 Lactuca sativa
Lsat_1_v5_gn_8_54500 Lactuca sativa
Manes.05G065800 Manihot esculenta
Manes.05G065900 Manihot esculenta
Mapoly0004s0277 Marchantia polymorpha
Mapoly0007s0103 Marchantia polymorpha
Mapoly0030s0133 Marchantia polymorpha
Mapoly0032s0010 Marchantia polymorpha
Mapoly0055s0074 Marchantia polymorpha
MBI01_g23938_MAGBIO Magnolia biondii
MBI02_g41934_MAGBIO Magnolia biondii
MBI05_g31851_MAGBIO Magnolia biondii
MBI19_g12821_MAGBIO Magnolia biondii
MBI19_g13121_MAGBIO Magnolia biondii
MBI19_g13122_MAGBIO Magnolia biondii
MCO08G095 Micromonas commoda
MD03G1284200 Malus domestica
MD03G1284300 Malus domestica
MD11G1302000 Malus domestica
Medtr1g088870 Medicago truncatula
Medtr7g108390 Medicago truncatula
MELO3C016044.2 Cucumis melo
MELO3C016045.2 Cucumis melo
Migut.D00183 Erythranthe guttata
Migut.D00184 Erythranthe guttata
Nitab4.5_0001447g0040 Nicotiana tabacum
Nitab4.5_0001697g0140 Nicotiana tabacum
Nitab4.5_0005578g0030 Nicotiana tabacum
Nitab4.5_0011064g0040 Nicotiana tabacum
Nn3g18179 Nelumbo nucifera
Nn3g21405 Nelumbo nucifera
Nn5g30059 Nelumbo nucifera
Nn5g30061 Nelumbo nucifera
Oeu011428.1 Olea europaea
Oeu011429.1 Olea europaea
Oeu046707.1 Olea europaea
Oeu046708.2 Olea europaea
Os01g0934300 Oryza sativa ssp. japonica
Os03g0346800 Oryza sativa ssp. japonica
Peaxi162Scf00067g01812 Petunia axillaris
Peaxi162Scf00067g01813 Petunia axillaris
Peaxi162Scf00067g01814 Petunia axillaris
Peaxi162Scf00067g01819 Petunia axillaris
PGR044G2614 Punica granatum
PGR119G0460 Punica granatum
PGSC0003DMG402011364 Solanum tuberosum
Phvul.001G204600 Phaseolus vulgaris
Phvul.007G165166 Phaseolus vulgaris
Potri.002G209023 Populus trichocarpa
Potri.002G209216 Populus trichocarpa
Potri.014G132800 Populus trichocarpa
Pp3c10_1060 Physcomitrium patens
Pp3c14_1830 Physcomitrium patens
Pp3c7_5840 Physcomitrium patens
PRCOL_00000973 Prasinoderma coloniale
Prupe.8G255600 Prunus persica
Prupe.8G255700 Prunus persica
Psat0s3384g0160 Pisum sativum
Psat3g022840 Pisum sativum
Psat6g167000 Pisum sativum
PSO210G0804 Papaver somniferum
PSO832G0331 Papaver somniferum
PSO832G4557 Papaver somniferum
QL12p030562 Quercus lobata
QL12p030584 Quercus lobata
RcHm_v2.0_Chr2g0170231 Rosa chinensis
RcHm_v2.0_Chr6g0293161 Rosa chinensis
RcHm_v2.0_Chr6g0293181 Rosa chinensis
Rhsim01G0282400 Rhododendron simsii
Rhsim13G0015100 Rhododendron simsii
Sabra02G0150900 Salix brachista
Sabra14G0099200 Salix brachista
SalBow3G3633 Salvia bowleyana
Sc05g0004310 Simmondsia chinensis
Sc17g0003440 Simmondsia chinensis
Sed0015917 Sechium edule
Sed0021907 Sechium edule
Sed0025005 Sechium edule
SEGI_29117 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00388 Striga asiatica
SHI15302 Sapria himalayana
SMO119G0396 Selaginella moellendorffii
SMO145G0291 Selaginella moellendorffii
Solyc09g074690.3 Solanum lycopersicum
Solyc09g074700.2 Solanum lycopersicum
Solyc09g074710.2 Solanum lycopersicum
Solyc09g074730.3 Solanum lycopersicum
Solyc09g074740.2 Solanum lycopersicum
Solyc09g074750.3 Solanum lycopersicum
Sopen09g029570 Solanum pennellii
Sopen09g029580 Solanum pennellii
Sopen09g029590 Solanum pennellii
Sopen09g029600 Solanum pennellii
Sp4g29760 Schrenkiella parvula
Sp6g02470 Schrenkiella parvula
TAR362G0158 Trochodendron aralioides
TAR362G0989 Trochodendron aralioides
TAR365G0282 Trochodendron aralioides
TAR399G0002 Trochodendron aralioides
TAR633G1653 Trochodendron aralioides
THA.LOC104815934 Tarenaya hassleriana
THA.LOC104817512 Tarenaya hassleriana
Thecc.01G293900 Theobroma cacao
Thecc.01G294000 Theobroma cacao
Thhalv10001431m.g Eutrema salsugineum
Thhalv10028403m.g Eutrema salsugineum
TPR.G33972 Trifolium pratense
TPR.G9283 Trifolium pratense
TWI14G0289 Tripterygium wilfordii
TWI14G0999 Tripterygium wilfordii
TWI59G0117 Tripterygium wilfordii
unitig_26.g10168 Utricularia gibba
vmacro02487 Vaccinium macrocarpon
vmacro14988 Vaccinium macrocarpon
VMungo0720G1827 Vigna mungo
VMungo1383G1965 Vigna mungo
Zm00001eb016640 Zea mays
Zm00001eb142180 Zea mays

User provided reference genes

Program Settings