Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31470 Brassica napus
A02p16140 Brassica napus
A03p43300 Brassica napus
A04p07880 Brassica napus
A04p07890 Brassica napus
A06p10610 Brassica napus
A08p31920 Brassica napus
Aa31LG1G500 Aethionema arabicum
Aa31LG2G7850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_129.2 Anthoceros agrestis
Actinidia12423 Actinidia chinensis
Actinidia37468 Actinidia chinensis
Ah.03g147140 Amaranthus hybridus
AL1G26540 Arabidopsis lyrata
AL1G52320 Arabidopsis lyrata
AL2G17520 Arabidopsis lyrata
AL3G38280 Arabidopsis lyrata
AL6G41760 Arabidopsis lyrata
AL7G42080 Arabidopsis lyrata
AL7G42090 Arabidopsis lyrata
Aqoxy3G04176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6E4I8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7JC2E Arachis hypogaea
AT1G14570 Arabidopsis thaliana
AT1G59550 Arabidopsis thaliana
AT3G23605 Arabidopsis thaliana
AT4G14245 Arabidopsis thaliana
AT4G14250 Arabidopsis thaliana
ATR0807G182 Amborella trichopoda
Atru.chr11.1078 Acer truncatum
Atru.chr4.986 Acer truncatum
AUR62003473 Chenopodium quinoa
AUR62017782 Chenopodium quinoa
BcaB02g06515 Brassica carinata
BcaB02g08624 Brassica carinata
BcaB02g08625 Brassica carinata
BcaB02g08626 Brassica carinata
BcaB03g13093 Brassica carinata
BcaB03g13133 Brassica carinata
BcaB03g14621 Brassica carinata
BcaB04g20438 Brassica carinata
BcaC01g03368 Brassica carinata
BcaC01g03369 Brassica carinata
BcaC02g09341 Brassica carinata
BcaC02g09342 Brassica carinata
BcaC02g09344 Brassica carinata
BcaC03g15119 Brassica carinata
BcaC05g25366 Brassica carinata
BcaC07g38745 Brassica carinata
BcaC07g41562 Brassica carinata
BcaC09g48957 Brassica carinata
BolC1t03966H Brassica oleracea
BolC2t08752H Brassica oleracea
BolC3t17585H Brassica oleracea
BolC4t25733H Brassica oleracea
BolC4t25734H Brassica oleracea
BolC4t25738H Brassica oleracea
BolC5t29995H Brassica oleracea
BolC8t49298H Brassica oleracea
BraA01t03273Z Brassica rapa
BraA03t13469Z Brassica rapa
BraA04t16477Z Brassica rapa
BraA04t16478Z Brassica rapa
BraA06t24241Z Brassica rapa
BraA08t35114Z Brassica rapa
C01p40100 Brassica napus
C02p26820 Brassica napus
C03p53210 Brassica napus
C04p41520 Brassica napus
C04p41530 Brassica napus
C04p41550 Brassica napus
C05p12480 Brassica napus
C08p16780 Brassica napus
CAN.G458.8 Capsicum annuum
CANSAT78G0539 Cannabis sativa
CARHR015070 Cardamine hirsuta
CARHR099530 Cardamine hirsuta
CARHR115340 Cardamine hirsuta
CARHR115350 Cardamine hirsuta
CARHR152270 Cardamine hirsuta
CARHR220370 Cardamine hirsuta
CARHR220380 Cardamine hirsuta
CARHR220390 Cardamine hirsuta
Carub.0001s1433 Capsella rubella
Carub.0003s2383 Capsella rubella
Carub.0007s2809 Capsella rubella
Carub.0007s2810 Capsella rubella
Ca_22531_v3 Cicer arietinum L.
CBR_g6541 Chara braunii
Cc11_g03300 Coffea canephora
CDE02G1991 Ceratophyllum demersum
CDE04G3285 Ceratophyllum demersum
Cfa027193 Carpinus fangiana
Ciclev10005240m.g Citrus clementina
Ciclev10013211m.g Citrus clementina
Ciclev10017670m.g Citrus clementina
CiPaw.05G163700 Carya illinoinensis
ClCG11G000930 Citrullus lanatus
COL.COLO4_27532 Corchorus olitorius
Cpa.g.sc2.94 Carica papaya
Cre03.g191150 Chlamydomonas reinhardtii
CsaV3_5G012900 Cucumis sativus L.
DCAR_002634 Daucus carota
DCAR_030326 Daucus carota
Dinv02580 Davidia involucrata
Duzib251G0507 Durio zibethinus
Duzib268G0161 Durio zibethinus
ECA233G3057 Erigeron canadensis
ECA234G0623 Erigeron canadensis
EL10Ac6g15401 Beta vulgaris
Eucgr.B02622 Eucalyptus grandis
FAN05G3815 Fragaria x ananassa
FAN07G0524 Fragaria x ananassa
FAN07G1375 Fragaria x ananassa
FAN09G4266 Fragaria x ananassa
FAN12G2627 Fragaria x ananassa
FAN14G2364 Fragaria x ananassa
FAN17G1140 Fragaria x ananassa
FAN17G2204 Fragaria x ananassa
FAN22G2254 Fragaria x ananassa
FvH4_4g36080 Fragaria vesca
Glyma.08G267900 Glycine max
Glyma.16G100500 Glycine max
Gohir.A03G116000 Gossypium hirsutum
Gohir.D02G139100 Gossypium hirsutum
Gorai.005G158000 Gossypium raimondii
GSVIVG01010276001 Vitis vinifera
HanXRQChr08g0224381 Helianthus annuus
HanXRQChr08g0224401 Helianthus annuus
HanXRQChr12g0365861 Helianthus annuus
HanXRQChr17g0568711 Helianthus annuus
Haze_01578 Corylus avellana
Haze_01579 Corylus avellana
Haze_26537 Corylus avellana
Hma1.2p1_0513F.1_g169530 Hydrangea macrophylla
HPP92_028142 Vanilla planifolia
HPP92_028143 Vanilla planifolia
Hund12797 Selenicereus undatus
Lalb_Chr05g0229091 Lupinus albus
Lalb_Chr09g0334561 Lupinus albus
Lj4g0010787 Lotus japonicus
Lj6C725T28 Lonicera japonica
Lsat_1_v5_gn_4_21881 Lactuca sativa
Lsat_1_v5_gn_5_9520 Lactuca sativa
Lsat_1_v5_gn_8_33860 Lactuca sativa
Manes.17G092500 Manihot esculenta
Mapoly0009s0063 Marchantia polymorpha
MBI06_g25394_MAGBIO Magnolia biondii
MBI08_g40000_MAGBIO Magnolia biondii
MBI12_g20130_MAGBIO Magnolia biondii
MD13G1012500 Malus domestica
MD16G1009200 Malus domestica
Medtr4g006220 Medicago truncatula
Medtr4g006310 Medicago truncatula
Medtr4g011870 Medicago truncatula
Medtr8g070760 Medicago truncatula
MELO3C020075.2 Cucumis melo
Migut.E00586 Erythranthe guttata
Migut.E00622 Erythranthe guttata
MSTRG.13658 Avicennia marina
MSTRG.2089 Avicennia marina
Nitab4.5_0000129g0480 Nicotiana tabacum
Nitab4.5_0000223g0280 Nicotiana tabacum
Nitab4.5_0006607g0010 Nicotiana tabacum
Nitab4.5_0010205g0040 Nicotiana tabacum
Nn3g18401 Nelumbo nucifera
Nn4g24811 Nelumbo nucifera
Nn5g30340 Nelumbo nucifera
Nn8g38695 Nelumbo nucifera
Oeu001131.1 Olea europaea
Oeu044054.1 Olea europaea
Oeu062079.1 Olea europaea
Os02g0640700 Oryza sativa ssp. japonica
Os04g0670800 Oryza sativa ssp. japonica
Peaxi162Scf00074g00114 Petunia axillaris
Peaxi162Scf00074g10113 Petunia axillaris
Peaxi162Scf00213g00163 Petunia axillaris
Peaxi162Scf00213g01618 Petunia axillaris
Peaxi162Scf00329g00935 Petunia axillaris
Peaxi162Scf00329g00945 Petunia axillaris
PGR044G0319 Punica granatum
PGSC0003DMG400012300 Solanum tuberosum
PGSC0003DMG400029482 Solanum tuberosum
Phvul.003G282600 Phaseolus vulgaris
Potri.008G142800 Populus trichocarpa
Potri.010G098800 Populus trichocarpa
Pp3c14_20650 Physcomitrium patens
PRCOL_00003482 Prasinoderma coloniale
Prupe.1G341400 Prunus persica
Psat4g111880 Pisum sativum
PSO063G7414 Papaver somniferum
PSO384G1202 Papaver somniferum
PSO384G1424 Papaver somniferum
PSO384G2771 Papaver somniferum
PSO541G0534 Papaver somniferum
PSO541G0801 Papaver somniferum
PSO541G3010 Papaver somniferum
PSO541G3561 Papaver somniferum
PSO541G3681 Papaver somniferum
PSO541G6440 Papaver somniferum
PSO541G6557 Papaver somniferum
PSO675G1787 Papaver somniferum
PSO675G2042 Papaver somniferum
PSO675G3239 Papaver somniferum
PSO675G3997 Papaver somniferum
PSO675G5774 Papaver somniferum
PSO675G8334 Papaver somniferum
PSO782G3229 Papaver somniferum
QL03p041323 Quercus lobata
QL03p041389 Quercus lobata
QL05p030299 Quercus lobata
QL05p030304 Quercus lobata
QL05p030359 Quercus lobata
QL05p030518 Quercus lobata
RcHm_v2.0_Chr4g0445701 Rosa chinensis
Rhsim03G0166900 Rhododendron simsii
Rhsim09G0080400 Rhododendron simsii
Sabra08G0108100 Salix brachista
Sabra10G0071300 Salix brachista
SalBow2G0664 Salvia bowleyana
SalBow2G2563 Salvia bowleyana
Sc03g0005500 Simmondsia chinensis
Sed0012874 Sechium edule
SEGI_05189 Sequoiadendron giganteum
SEGI_31429 Sequoiadendron giganteum
SGA_v2.0_scaffold127G33969 Striga asiatica
Solyc04g008510.3 Solanum lycopersicum
Solyc08g082050.3 Solanum lycopersicum
Sopen04g003660 Solanum pennellii
Sopen08g030340 Solanum pennellii
Sp1g12920 Schrenkiella parvula
Sp3g21280 Schrenkiella parvula
Sp6g06930 Schrenkiella parvula
Sp7g12210 Schrenkiella parvula
Sp7g12220 Schrenkiella parvula
Sp7g12230 Schrenkiella parvula
Sp7g12240 Schrenkiella parvula
Sp7g12270 Schrenkiella parvula
Sp7g12380 Schrenkiella parvula
TAR374G0464 Trochodendron aralioides
TAR374G0678 Trochodendron aralioides
TAR374G0885 Trochodendron aralioides
TAR622G0274 Trochodendron aralioides
THA.LOC104798911 Tarenaya hassleriana
THA.LOC104798955 Tarenaya hassleriana
THA.LOC104799986 Tarenaya hassleriana
THA.LOC104805119 Tarenaya hassleriana
THA.LOC104824106 Tarenaya hassleriana
Thecc.01G377200 Theobroma cacao
Thecc.02G298300 Theobroma cacao
Thhalv10007578m.g Eutrema salsugineum
Thhalv10021701m.g Eutrema salsugineum
Thhalv10027144m.g Eutrema salsugineum
Thhalv10027208m.g Eutrema salsugineum
Thhalv10027233m.g Eutrema salsugineum
Thhalv10027532m.g Eutrema salsugineum
TPR.G19836 Trifolium pratense
TWI59G0816 Tripterygium wilfordii
TWI74G0827 Tripterygium wilfordii
TWI77G0239 Tripterygium wilfordii
unitig_22.g6352 Utricularia gibba
vmacro10777 Vaccinium macrocarpon
VMungo0251G3689 Vigna mungo
Zm00001eb066780 Zea mays
Zm00001eb185740 Zea mays
Zm00001eb433390 Zea mays

User provided reference genes

Program Settings