Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31700 Brassica napus
A07p09190 Brassica napus
A07p09210 Brassica napus
A07p19820 Brassica napus
A08p03200 Brassica napus
Aa31LG8G9820 Aethionema arabicum
Aa31LG9G2960 Aethionema arabicum
Aa31LG9G4840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3253 Anthoceros agrestis
Actinidia04444 Actinidia chinensis
Actinidia09542 Actinidia chinensis
Actinidia25796 Actinidia chinensis
Actinidia40051 Actinidia chinensis
Ah.02g112090 Amaranthus hybridus
Ah.04g155710 Amaranthus hybridus
AL3G37930 Arabidopsis lyrata
AL7G41860 Arabidopsis lyrata
Aqoxy2G03654 Aquilegia oxysepala
Aqoxy2G03657 Aquilegia oxysepala
Aqoxy5G00220 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CN7ZZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KT8NWR Arachis hypogaea
AT3G23280 Arabidopsis thaliana
AT4G14365 Arabidopsis thaliana
ATR0736G123 Amborella trichopoda
Atru.chr4.2051 Acer truncatum
Atru.chr5.1706 Acer truncatum
AUR62002144 Chenopodium quinoa
AUR62011846 Chenopodium quinoa
AUR62011847 Chenopodium quinoa
AUR62015562 Chenopodium quinoa
AUR62024688 Chenopodium quinoa
AUR62024689 Chenopodium quinoa
AUR62024690 Chenopodium quinoa
BcaB02g07997 Brassica carinata
BcaB02g10114 Brassica carinata
BcaB04g20456 Brassica carinata
BcaB04g20457 Brassica carinata
BcaB05g22560 Brassica carinata
BcaB06g26468 Brassica carinata
BcaB06g26471 Brassica carinata
BcaB07g32373 Brassica carinata
BcaC01g01224 Brassica carinata
BcaC05g26297 Brassica carinata
BcaC08g44403 Brassica carinata
BcaC09g49278 Brassica carinata
BcaC09g49281 Brassica carinata
BolC1t04012H Brassica oleracea
BolC3t21272H Brassica oleracea
BolC5t31013H Brassica oleracea
BolC6t37052H Brassica oleracea
BolC7t41914H Brassica oleracea
BolC7t41916H Brassica oleracea
BraA01t03298Z Brassica rapa
BraA07t28714Z Brassica rapa
BraA07t28717Z Brassica rapa
BraA07t29686Z Brassica rapa
BraA08t32352Z Brassica rapa
C01p40590 Brassica napus
C01p40620 Brassica napus
C03p89580 Brassica napus
C05p23120 Brassica napus
C06p18390 Brassica napus
C07p14180 Brassica napus
C07p14220 Brassica napus
CAN.G1492.3 Capsicum annuum
CAN.G1634.1 Capsicum annuum
CAN.G1634.2 Capsicum annuum
CANSAT01G0753 Cannabis sativa
CANSAT78G1529 Cannabis sativa
CARHR099240 Cardamine hirsuta
CARHR099250 Cardamine hirsuta
CARHR220580 Cardamine hirsuta
Carub.0003s2638 Capsella rubella
Carub.0007s2789 Capsella rubella
Ca_09864_v3 Cicer arietinum L.
Ca_24934_v3 Cicer arietinum L.
CBR_g28052 Chara braunii
Cc03_g05610 Coffea canephora
CDE05G0726 Ceratophyllum demersum
CDE08G0895 Ceratophyllum demersum
Cfa002436 Carpinus fangiana
Cfa022964 Carpinus fangiana
Ciclev10004847m.g Citrus clementina
Ciclev10024413m.g Citrus clementina
CiPaw.01G183700 Carya illinoinensis
CiPaw.02G111500 Carya illinoinensis
CiPaw.03G265300 Carya illinoinensis
ClCG05G004300 Citrullus lanatus
ClCG06G007010 Citrullus lanatus
COL.COLO4_03874 Corchorus olitorius
COL.COLO4_04034 Corchorus olitorius
COL.COLO4_15884 Corchorus olitorius
Cpa.g.sc44.48 Carica papaya
Cre06.g255050 Chlamydomonas reinhardtii
CsaV3_2G012750 Cucumis sativus L.
CsaV3_3G012040 Cucumis sativus L.
CSS0001322 Camellia sinensis var. sinensis
CSS0018016 Camellia sinensis var. sinensis
CSS0040189 Camellia sinensis var. sinensis
DCAR_027320 Daucus carota
DCAR_030746 Daucus carota
Dinv27056 Davidia involucrata
Dinv27057 Davidia involucrata
Dinv29852 Davidia involucrata
Dinv29853 Davidia involucrata
Duzib138G1857 Durio zibethinus
Duzib151G0140 Durio zibethinus
ECA240G2110 Erigeron canadensis
ECA240G4098 Erigeron canadensis
ECA248G3269 Erigeron canadensis
EL10Ac3g04997 Beta vulgaris
EL10As5g23489 Beta vulgaris
EL10As5g23490 Beta vulgaris
Eucgr.H03040 Eucalyptus grandis
FAN12G1556 Fragaria x ananassa
FAN17G1768 Fragaria x ananassa
FvH4_4g03720 Fragaria vesca
FvH4_4g03730 Fragaria vesca
Glyma.10G181100 Glycine max
Glyma.20G209400 Glycine max
Gohir.A10G111700 Gossypium hirsutum
Gohir.A11G131300 Gossypium hirsutum
Gohir.A12G159700 Gossypium hirsutum
Gohir.D10G156800 Gossypium hirsutum
Gohir.D11G137000 Gossypium hirsutum
Gorai.007G146700 Gossypium raimondii
Gorai.011G174600 Gossypium raimondii
GSVIVG01020545001 Vitis vinifera
GSVIVG01027825001 Vitis vinifera
HanXRQChr03g0091461 Helianthus annuus
HanXRQChr13g0421991 Helianthus annuus
Haze_11390 Corylus avellana
Haze_24642 Corylus avellana
Hma1.2p1_0992F.1_g245230 Hydrangea macrophylla
HPP92_008602 Vanilla planifolia
Hund02928 Selenicereus undatus
Hund02929 Selenicereus undatus
Hund03046 Selenicereus undatus
Lalb_Chr02g0152451 Lupinus albus
Lalb_Chr06g0169051 Lupinus albus
Lalb_Chr21g0312051 Lupinus albus
Lj2A1150T38 Lonicera japonica
Lj3C693G7 Lonicera japonica
Lj5g0007229 Lotus japonicus
Lj6C635T4 Lonicera japonica
Lsat_1_v5_gn_3_116681 Lactuca sativa
Lsat_1_v5_gn_3_118301 Lactuca sativa
Lsat_1_v5_gn_5_183540 Lactuca sativa
Manes.03G163633 Manihot esculenta
Manes.03G163701 Manihot esculenta
Manes.13G034900 Manihot esculenta
Manes.15G041400 Manihot esculenta
Mapoly0139s0018 Marchantia polymorpha
MBI07_g16924_MAGBIO Magnolia biondii
MBI07_g16925_MAGBIO Magnolia biondii
MBI10_g20268_MAGBIO Magnolia biondii
MCO11G527 Micromonas commoda
MD05G1075400 Malus domestica
MD13G1214800 Malus domestica
MD16G1219900 Malus domestica
Medtr1g476030 Medicago truncatula
MELO3C006418.2 Cucumis melo
MELO3C022999.2 Cucumis melo
Migut.G00512 Erythranthe guttata
Migut.N00275 Erythranthe guttata
MSTRG.24679 Avicennia marina
MSTRG.4140 Avicennia marina
MSTRG.9887 Avicennia marina
Nitab4.5_0000044g0360 Nicotiana tabacum
Nitab4.5_0000326g0080 Nicotiana tabacum
Nitab4.5_0001327g0060 Nicotiana tabacum
Nitab4.5_0003591g0010 Nicotiana tabacum
Nitab4.5_0003591g0020 Nicotiana tabacum
Nn1g02785 Nelumbo nucifera
Nn3g19668 Nelumbo nucifera
Oeu011506.1 Olea europaea
Oeu011507.1 Olea europaea
Oeu014761.1 Olea europaea
Oeu055234.1 Olea europaea
Oeu059152.2 Olea europaea
Os07g0446100 Oryza sativa ssp. japonica
Peaxi162Scf00485g01323 Petunia axillaris
Peaxi162Scf01265g00121 Petunia axillaris
Peaxi162Scf01265g00122 Petunia axillaris
Peaxi162Scf01265g00123 Petunia axillaris
PGR004G2720 Punica granatum
PGSC0003DMG400017222 Solanum tuberosum
PGSC0003DMG401010896 Solanum tuberosum
Phvul.007G108300 Phaseolus vulgaris
Potri.005G225300 Populus trichocarpa
Potri.008G167600 Populus trichocarpa
Potri.010G070750 Populus trichocarpa
Potri.010G070800 Populus trichocarpa
Potri.018G011300 Populus trichocarpa
Pp3c13_4370 Physcomitrium patens
Pp3c23_11570 Physcomitrium patens
Pp3c24_10150 Physcomitrium patens
Pp3c2_26760 Physcomitrium patens
Pp3c4_25520 Physcomitrium patens
Prupe.1G040200 Prunus persica
Psat6g116360 Pisum sativum
PSO210G2672 Papaver somniferum
PSO210G2687 Papaver somniferum
PSO210G4323 Papaver somniferum
PSO675G0825 Papaver somniferum
PSO675G4716 Papaver somniferum
PSO832G1311 Papaver somniferum
QL06p018143 Quercus lobata
QL09p039216 Quercus lobata
QL09p039258 Quercus lobata
QL09p039271 Quercus lobata
RcHm_v2.0_Chr4g0393331 Rosa chinensis
RcHm_v2.0_Chr4g0393371 Rosa chinensis
Rhsim01G0262700 Rhododendron simsii
Rhsim04G0178700 Rhododendron simsii
Rhsim04G0178900 Rhododendron simsii
Rhsim04G0179100 Rhododendron simsii
Rhsim04G0179200 Rhododendron simsii
Rhsim04G0180000 Rhododendron simsii
Rhsim04G0180100 Rhododendron simsii
Rhsim04G0180200 Rhododendron simsii
Rhsim04G0180300 Rhododendron simsii
Rhsim04G0180400 Rhododendron simsii
Rhsim04G0180500 Rhododendron simsii
Sabra05G0173900 Salix brachista
Sabra08G0127700 Salix brachista
Sabra10G0036600 Salix brachista
SalBow3G2693 Salvia bowleyana
Sc05g0000590 Simmondsia chinensis
Sc05g0000600 Simmondsia chinensis
Sc13g0005750 Simmondsia chinensis
Sed0022557 Sechium edule
Sed0027434 Sechium edule
SEGI_11041 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22739 Striga asiatica
SHI00710 Sapria himalayana
SMO356G0454 Selaginella moellendorffii
SMO356G0496 Selaginella moellendorffii
SMO358G0400 Selaginella moellendorffii
Solyc06g008500.3 Solanum lycopersicum
Solyc09g090160.3 Solanum lycopersicum
Sopen06g003270 Solanum pennellii
Sopen09g033080 Solanum pennellii
Sp3g20940 Schrenkiella parvula
Sp7g12440 Schrenkiella parvula
TAR362G1190 Trochodendron aralioides
TAR365G0526 Trochodendron aralioides
TAR633G0638 Trochodendron aralioides
THA.LOC104804754 Tarenaya hassleriana
THA.LOC104808626 Tarenaya hassleriana
Thecc.01G257100 Theobroma cacao
Thecc.04G256300 Theobroma cacao
Thhalv10020731m.g Eutrema salsugineum
Thhalv10025615m.g Eutrema salsugineum
Thhalv10026129m.g Eutrema salsugineum
Thhalv10026740m.g Eutrema salsugineum
TPR.G1502 Trifolium pratense
TWI09G0763 Tripterygium wilfordii
TWI53G1948 Tripterygium wilfordii
unitig_32.g10847 Utricularia gibba
unitig_747.g21682 Utricularia gibba
vmacro08479 Vaccinium macrocarpon
vmacro14817 Vaccinium macrocarpon
VMungo0720G2161 Vigna mungo
Zm00001eb306280 Zea mays

User provided reference genes

Program Settings