Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46220 Brassica napus
A08p37200 Brassica napus
A09p22060 Brassica napus
Aa31LG1G9030 Aethionema arabicum
Aa31LG9G6820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2138 Anthoceros agrestis
Actinidia16575 Actinidia chinensis
Actinidia39481 Actinidia chinensis
Actinidia39484 Actinidia chinensis
Ah.12g060640 Amaranthus hybridus
Ah.14g089710 Amaranthus hybridus
Ah.15g093000 Amaranthus hybridus
AL1G13390 Arabidopsis lyrata
AL8G12440 Arabidopsis lyrata
Aqoxy4G00604 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BNQL10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T00U8Q Arachis hypogaea
AT1G03830 Arabidopsis thaliana
AT5G46070 Arabidopsis thaliana
ATR0602G206 Amborella trichopoda
Atru.chr10.1781 Acer truncatum
Atru.chr10.1782 Acer truncatum
AUR62008705 Chenopodium quinoa
AUR62014880 Chenopodium quinoa
AUR62025528 Chenopodium quinoa
AUR62031088 Chenopodium quinoa
BcaB07g30857 Brassica carinata
BcaC04g21734 Brassica carinata
BcaC06g31502 Brassica carinata
BcaC07g36941 Brassica carinata
BcaC07g36942 Brassica carinata
BolC2t10049H Brassica oleracea
BolC7t43466H Brassica oleracea
BolC8t46877H Brassica oleracea
BolC9t55694H Brassica oleracea
BraA06t27486Z Brassica rapa
BraA08t35619Z Brassica rapa
BraA09t37812Z Brassica rapa
C02p40240 Brassica napus
C07p29240 Brassica napus
C08p00790 Brassica napus
C09p28210 Brassica napus
CAN.G529.62 Capsicum annuum
CAN.G813.6 Capsicum annuum
CANSAT35G0219 Cannabis sativa
CARHR003160 Cardamine hirsuta
CARHR175860 Cardamine hirsuta
Carub.0001s0295 Capsella rubella
Carub.0008s0186 Capsella rubella
Ca_18600_v3 Cicer arietinum L.
CBR_g39543 Chara braunii
Cc02_g14020 Coffea canephora
CDE02G1050 Ceratophyllum demersum
CDE09G0660 Ceratophyllum demersum
Cfa000535 Carpinus fangiana
Ciclev10014139m.g Citrus clementina
CiPaw.09G064200 Carya illinoinensis
CiPaw.10G053200 Carya illinoinensis
ClCG00G002770 Citrullus lanatus
ClCG01G023320 Citrullus lanatus
COL.COLO4_31408 Corchorus olitorius
COL.COLO4_37677 Corchorus olitorius
Cpa.g.sc1080.3 Carica papaya
Cpa.g.sc83.100 Carica papaya
Cpa.g.sc83.101 Carica papaya
Cre03.g173400 Chlamydomonas reinhardtii
Cre08.g384200 Chlamydomonas reinhardtii
Cre11.g467610 Chlamydomonas reinhardtii
Cre16.g676200 Chlamydomonas reinhardtii
CsaV3_6G050460 Cucumis sativus L.
CSS0006869 Camellia sinensis var. sinensis
CSS0021581 Camellia sinensis var. sinensis
DCAR_024895 Daucus carota
DCAR_028041 Daucus carota
Dinv17362 Davidia involucrata
Dinv40607 Davidia involucrata
Duzib052G0745 Durio zibethinus
Duzib160G0687 Durio zibethinus
Duzib192G0543 Durio zibethinus
Duzib235G1107 Durio zibethinus
ECA234G1452 Erigeron canadensis
ECA236G0316 Erigeron canadensis
EL10Ac7g17568 Beta vulgaris
EL10Ac8g20445 Beta vulgaris
Eucgr.C03068 Eucalyptus grandis
Eucgr.D00590 Eucalyptus grandis
Eucgr.L03330 Eucalyptus grandis
FAN11G3059 Fragaria x ananassa
FAN16G1530 Fragaria x ananassa
FAN21G0308 Fragaria x ananassa
FAN25G0596 Fragaria x ananassa
FvH4_3g08471 Fragaria vesca
Glyma.07G202100 Glycine max
Glyma.13G174200 Glycine max
Glyma.13G234600 Glycine max
Glyma.15G078400 Glycine max
Glyma.15G078450 Glycine max
Gohir.A06G127200 Gossypium hirsutum
Gohir.A10G028300 Gossypium hirsutum
Gohir.D06G135500 Gossypium hirsutum
Gohir.D10G028700 Gossypium hirsutum
Gorai.010G157500 Gossypium raimondii
Gorai.011G030500 Gossypium raimondii
GSVIVG01021121001 Vitis vinifera
GSVIVG01021122001 Vitis vinifera
HanXRQChr11g0332691 Helianthus annuus
HanXRQChr15g0480031 Helianthus annuus
HanXRQChr17g0564931 Helianthus annuus
Haze_06366 Corylus avellana
Hma1.2p1_0206F.1_g087630 Hydrangea macrophylla
HPP92_020202 Vanilla planifolia
Hund18210 Selenicereus undatus
Hund21205 Selenicereus undatus
Hund23821 Selenicereus undatus
Lalb_Chr09g0327861 Lupinus albus
Lalb_Chr15g0089661 Lupinus albus
Lalb_Chr15g0089671 Lupinus albus
Lalb_Chr16g0384091 Lupinus albus
Lj1C1200G23 Lonicera japonica
Lj2C293T13 Lonicera japonica
Lj4g0011488 Lotus japonicus
Lsat_1_v5_gn_4_27980 Lactuca sativa
Lsat_1_v5_gn_5_184321 Lactuca sativa
Lsat_1_v5_gn_5_93501 Lactuca sativa
Lsat_1_v5_gn_7_30920 Lactuca sativa
Manes.16G032600 Manihot esculenta
Manes.17G050000 Manihot esculenta
Mapoly0197s0017 Marchantia polymorpha
Mapoly0197s0019 Marchantia polymorpha
MBI06_g04404_MAGBIO Magnolia biondii
MBI11_g47561_MAGBIO Magnolia biondii
MBI13_g03361_MAGBIO Magnolia biondii
MBI13_g05168_MAGBIO Magnolia biondii
MBI13_g45722_MAGBIO Magnolia biondii
MBI13_g45724_MAGBIO Magnolia biondii
MCO07G396 Micromonas commoda
MD05G1253900 Malus domestica
MD05G1309600 Malus domestica
MD10G1288200 Malus domestica
Medtr2g014740 Medicago truncatula
Medtr2g089300 Medicago truncatula
Medtr4g088220 Medicago truncatula
Medtr8g069150 Medicago truncatula
MELO3C007254.2 Cucumis melo
Migut.M01100 Erythranthe guttata
MSTRG.7364 Avicennia marina
Nitab4.5_0001955g0010 Nicotiana tabacum
Nitab4.5_0002114g0140 Nicotiana tabacum
Nitab4.5_0003315g0010 Nicotiana tabacum
Nitab4.5_0006826g0020 Nicotiana tabacum
Nitab4.5_0007082g0020 Nicotiana tabacum
Nitab4.5_0010054g0010 Nicotiana tabacum
Nn1g04247 Nelumbo nucifera
Nn1g06401 Nelumbo nucifera
Oeu012159.2 Olea europaea
Oeu050786.1 Olea europaea
Os02g0307000 Oryza sativa ssp. japonica
Os05g0563050 Oryza sativa ssp. japonica
Os05g0563100 Oryza sativa ssp. japonica
Peaxi162Scf00099g00079 Petunia axillaris
Peaxi162Scf00490g00311 Petunia axillaris
PGR004G1187 Punica granatum
PGSC0003DMG400015073 Solanum tuberosum
PGSC0003DMG400022833 Solanum tuberosum
Phvul.003G290500 Phaseolus vulgaris
Phvul.006G181400 Phaseolus vulgaris
Potri.004G049400 Populus trichocarpa
Potri.005G168402 Populus trichocarpa
Potri.011G058500 Populus trichocarpa
Potri.017G016800 Populus trichocarpa
Pp3c12_11340 Physcomitrium patens
Pp3c1_10700 Physcomitrium patens
Pp3c26_6269 Physcomitrium patens
Pp3c2_33790 Physcomitrium patens
Pp3c3_11940 Physcomitrium patens
PRCOL_00003946 Prasinoderma coloniale
Prupe.4G053400 Prunus persica
Psat7g116720 Pisum sativum
PSO210G7643 Papaver somniferum
PSO541G2371 Papaver somniferum
PSO675G8802 Papaver somniferum
PSO832G0299 Papaver somniferum
QL05p042992 Quercus lobata
QL05p045140 Quercus lobata
QL05p045510 Quercus lobata
RcHm_v2.0_Chr5g0009341 Rosa chinensis
Rhsim02G0135500 Rhododendron simsii
Rhsim13G0180600 Rhododendron simsii
Sabra03G0113700 Salix brachista
Sabra04G0031100 Salix brachista
Sabra11G0040600 Salix brachista
Sabra15G0033700 Salix brachista
Sabra15G0058100 Salix brachista
Sabra17G0013000 Salix brachista
Sabra17G0080300 Salix brachista
SalBow8G1315 Salvia bowleyana
SalBow8G4204 Salvia bowleyana
Sc17g0005890 Simmondsia chinensis
Sed0000642 Sechium edule
Sed0021408 Sechium edule
Sed0025742 Sechium edule
SEGI_39920 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07643 Striga asiatica
SGA_v2.0_scaffold309G48172 Striga asiatica
SHI01516 Sapria himalayana
SHI01520 Sapria himalayana
SHI01523 Sapria himalayana
SHI28093 Sapria himalayana
SHI28101 Sapria himalayana
SHI28102 Sapria himalayana
SMO137G0049 Selaginella moellendorffii
Solyc01g015010.1 Solanum lycopersicum
Solyc01g066614.1 Solanum lycopersicum
Solyc02g005007.1 Solanum lycopersicum
Solyc02g077600.3 Solanum lycopersicum
Solyc05g026370.3 Solanum lycopersicum
Solyc05g041770.3 Solanum lycopersicum
Solyc08g062250.3 Solanum lycopersicum
Solyc10g008950.3 Solanum lycopersicum
Solyc11g013740.3 Solanum lycopersicum
Solyc12g021363.1 Solanum lycopersicum
Sopen02g022500 Solanum pennellii
Sopen03g011240 Solanum pennellii
Sopen04g013900 Solanum pennellii
Sopen09g026580 Solanum pennellii
Sopen10g004740 Solanum pennellii
Sopen11g019190 Solanum pennellii
Sp1g02690 Schrenkiella parvula
Sp2g10920 Schrenkiella parvula
TAR624G0072 Trochodendron aralioides
TAR624G0825 Trochodendron aralioides
TAR624G1203 Trochodendron aralioides
TAR626G1005 Trochodendron aralioides
TAR627G0078 Trochodendron aralioides
TAR627G0221 Trochodendron aralioides
THA.LOC104798407 Tarenaya hassleriana
THA.LOC104801159 Tarenaya hassleriana
Thecc.02G187200 Theobroma cacao
Thecc.06G180200 Theobroma cacao
Thhalv10000755m.g Eutrema salsugineum
Thhalv10009747m.g Eutrema salsugineum
Thhalv10022496m.g Eutrema salsugineum
TPR.G108 Trifolium pratense
TPR.G13654 Trifolium pratense
TPR.G14940 Trifolium pratense
TPR.G36171 Trifolium pratense
TPR.G40284 Trifolium pratense
TPR.G7247 Trifolium pratense
TWI14G0291 Tripterygium wilfordii
TWI23G0843 Tripterygium wilfordii
TWI38G0418 Tripterygium wilfordii
unitig_27.g24978 Utricularia gibba
unitig_699.g19113 Utricularia gibba
vmacro03901 Vaccinium macrocarpon
vmacro15938 Vaccinium macrocarpon
vmacro22829 Vaccinium macrocarpon
vmacro22963 Vaccinium macrocarpon
VMungo0540G0056 Vigna mungo
VMungo1395G0001 Vigna mungo
Zm00001eb096460 Zea mays
Zm00001eb166970 Zea mays
Zm00001eb223600 Zea mays
Zm00001eb235320 Zea mays
Zm00001eb236960 Zea mays
Zm00001eb295820 Zea mays
Zm00001eb343670 Zea mays
Zm00001eb351370 Zea mays

User provided reference genes

Program Settings