Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p25830 Brassica napus
A05p11980 Brassica napus
Aa31LG9G13480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2839 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3565 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4466 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5537 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.820 Anthoceros agrestis
Actinidia09597 Actinidia chinensis
Actinidia18304 Actinidia chinensis
Actinidia22118 Actinidia chinensis
Actinidia25525 Actinidia chinensis
Actinidia30589 Actinidia chinensis
Actinidia33999 Actinidia chinensis
Ah.01g007700 Amaranthus hybridus
Ah.02g114620 Amaranthus hybridus
Ah.02g131450 Amaranthus hybridus
AL4G29220 Arabidopsis lyrata
Aqoxy1G00445 Aquilegia oxysepala
Aqoxy5G03143 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.85CPFH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6HYPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QC7JPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VMJF59 Arachis hypogaea
AT2G33550 Arabidopsis thaliana
ATR0582G285 Amborella trichopoda
ATR0594G084 Amborella trichopoda
ATR0626G112 Amborella trichopoda
ATR0736G114 Amborella trichopoda
Atru.chr12.1406 Acer truncatum
Atru.chr6.1911 Acer truncatum
AUR62009533 Chenopodium quinoa
AUR62028844 Chenopodium quinoa
AUR62041696 Chenopodium quinoa
AUR62044304 Chenopodium quinoa
BcaB02g10573 Brassica carinata
BcaB06g28695 Brassica carinata
BcaB06g28696 Brassica carinata
BcaC02g07800 Brassica carinata
BcaC02g07801 Brassica carinata
BcaC02g11439 Brassica carinata
BolC4t23124H Brassica oleracea
BolC4t27781H Brassica oleracea
BraA04t18085Z Brassica rapa
BraA05t20141Z Brassica rapa
C04p15530 Brassica napus
C04p63060 Brassica napus
CAN.G1034.16 Capsicum annuum
CAN.G124.2 Capsicum annuum
CAN.G1724.2 Capsicum annuum
CAN.G843.13 Capsicum annuum
CARHR127560 Cardamine hirsuta
Carub.0004s1518 Capsella rubella
Ca_07076_v3 Cicer arietinum L.
Ca_16813_v3 Cicer arietinum L.
CBR_g38396 Chara braunii
Cc00_g33380 Coffea canephora
Cc00_g33880 Coffea canephora
Cc11_g15060 Coffea canephora
Cc11_g15070 Coffea canephora
CDE02G2776 Ceratophyllum demersum
CDE05G0009 Ceratophyllum demersum
CDE05G3192 Ceratophyllum demersum
CDE06G0988 Ceratophyllum demersum
Cfa009445 Carpinus fangiana
Ciclev10005329m.g Citrus clementina
Ciclev10033491m.g Citrus clementina
CiPaw.05G101900 Carya illinoinensis
CiPaw.06G109100 Carya illinoinensis
ClCG06G001740 Citrullus lanatus
COL.COLO4_21770 Corchorus olitorius
COL.COLO4_37251 Corchorus olitorius
Cpa.g.sc2461.1 Carica papaya
CsaV3_6G007760 Cucumis sativus L.
CSS0009758 Camellia sinensis var. sinensis
CSS0022489 Camellia sinensis var. sinensis
CSS0030889 Camellia sinensis var. sinensis
CSS0033009 Camellia sinensis var. sinensis
CSS0047452 Camellia sinensis var. sinensis
DCAR_000127 Daucus carota
DCAR_021402 Daucus carota
DCAR_024631 Daucus carota
Dinv01472 Davidia involucrata
Dinv13726 Davidia involucrata
Dinv19305 Davidia involucrata
Dinv23220 Davidia involucrata
Duzib052G0845 Durio zibethinus
Duzib084G0396 Durio zibethinus
Duzib132G0792 Durio zibethinus
ECA234G1825 Erigeron canadensis
ECA246G2368 Erigeron canadensis
EL10Ac5g11294 Beta vulgaris
EL10Ac6g13606 Beta vulgaris
Eucgr.B03553 Eucalyptus grandis
FAN04G1977 Fragaria x ananassa
FAN07G0908 Fragaria x ananassa
FAN08G1434 Fragaria x ananassa
FAN12G1604 Fragaria x ananassa
FAN13G0340 Fragaria x ananassa
FAN17G1050 Fragaria x ananassa
FAN18G1947 Fragaria x ananassa
FvH4_4g22720 Fragaria vesca
FvH4_5g09440 Fragaria vesca
Glyma.05G200400 Glycine max
Glyma.08G007800 Glycine max
Glyma.08G257500 Glycine max
Glyma.10G298700 Glycine max
Glyma.18G281800 Glycine max
Glyma.20G249900 Glycine max
Gohir.A01G020800 Gossypium hirsutum
Gohir.D01G019300 Gossypium hirsutum
Gorai.002G021600 Gossypium raimondii
GSVIVG01001081001 Vitis vinifera
GSVIVG01008644001 Vitis vinifera
HanXRQChr05g0155411 Helianthus annuus
HanXRQChr12g0384721 Helianthus annuus
HanXRQChr16g0529331 Helianthus annuus
HanXRQChr16g0529341 Helianthus annuus
Haze_12497 Corylus avellana
Hma1.2p1_0577F.1_g182310 Hydrangea macrophylla
Hma1.2p1_0787F.1_g217860 Hydrangea macrophylla
HPP92_023028 Vanilla planifolia
Hund02506 Selenicereus undatus
Hund25508 Selenicereus undatus
Lalb_Chr02g0144711 Lupinus albus
Lalb_Chr04g0258121 Lupinus albus
Lalb_Chr07g0183791 Lupinus albus
Lalb_Chr07g0183801 Lupinus albus
Lalb_Chr10g0092211 Lupinus albus
Lalb_Chr12g0202481 Lupinus albus
Lalb_Chr12g0202491 Lupinus albus
Lalb_Chr13g0296971 Lupinus albus
Lalb_Chr13g0296981 Lupinus albus
Lj1g0023956 Lotus japonicus
Lj4g0017089 Lotus japonicus
Lj6A837G33 Lonicera japonica
Lj9C486T16 Lonicera japonica
LjContig00470g0023601 Lotus japonicus
Lsat_1_v5_gn_4_1480 Lactuca sativa
Lsat_1_v5_gn_5_10240 Lactuca sativa
Manes.06G126500 Manihot esculenta
Manes.08G101700 Manihot esculenta
Manes.09G187700 Manihot esculenta
Mapoly0001s0020 Marchantia polymorpha
Mapoly0011s0045 Marchantia polymorpha
Mapoly0013s0135 Marchantia polymorpha
Mapoly0043s0010 Marchantia polymorpha
Mapoly0056s0059 Marchantia polymorpha
Mapoly0142s0034 Marchantia polymorpha
Mapoly0229s0008 Marchantia polymorpha
MBI07_g41899_MAGBIO Magnolia biondii
MBI10_g39274_MAGBIO Magnolia biondii
MD06G1131400 Malus domestica
MD13G1130000 Malus domestica
MD14G1147800 Malus domestica
MD16G1130200 Malus domestica
Medtr1g112650 Medicago truncatula
Medtr7g020870 Medicago truncatula
Medtr8g100130 Medicago truncatula
MELO3C022356.2 Cucumis melo
Migut.D01185 Erythranthe guttata
Migut.K01061 Erythranthe guttata
MSTRG.457 Avicennia marina
Nitab4.5_0000049g0070 Nicotiana tabacum
Nitab4.5_0000976g0050 Nicotiana tabacum
Nitab4.5_0007658g0010 Nicotiana tabacum
Nitab4.5_0010249g0020 Nicotiana tabacum
Nn3g16283 Nelumbo nucifera
Nn4g22137 Nelumbo nucifera
Oeu013658.5 Olea europaea
Oeu058895.1 Olea europaea
Os02g0516800 Oryza sativa ssp. japonica
Os04g0397500 Oryza sativa ssp. japonica
Peaxi162Scf00128g01777 Petunia axillaris
Peaxi162Scf00314g00642 Petunia axillaris
PGR102G0822 Punica granatum
PGR119G1955 Punica granatum
PGSC0003DMG400014176 Solanum tuberosum
PGSC0003DMG400037032 Solanum tuberosum
PGSC0003DMG400037364 Solanum tuberosum
PGSC0003DMG400037473 Solanum tuberosum
Phvul.002G281800 Phaseolus vulgaris
Phvul.007G000400 Phaseolus vulgaris
Phvul.008G019400 Phaseolus vulgaris
Potri.001G066900 Populus trichocarpa
Potri.003G163000 Populus trichocarpa
Potri.012G106650 Populus trichocarpa
Potri.015G105800 Populus trichocarpa
Pp3c12_22800 Physcomitrium patens
Pp3c15_4190 Physcomitrium patens
Pp3c26_2600 Physcomitrium patens
Pp3c26_2630 Physcomitrium patens
Pp3c4_22830 Physcomitrium patens
Pp3c4_22880 Physcomitrium patens
Pp3c4_270 Physcomitrium patens
Prupe.1G216100 Prunus persica
Prupe.5G142400 Prunus persica
Psat3g190160 Pisum sativum
Psat7g039360 Pisum sativum
PSO017G5279 Papaver somniferum
PSO478G1702 Papaver somniferum
QL03p049540 Quercus lobata
QL10p000562 Quercus lobata
RcHm_v2.0_Chr2g0112661 Rosa chinensis
RcHm_v2.0_Chr4g0428941 Rosa chinensis
RcHm_v2.0_Chr7g0188751 Rosa chinensis
Rhsim12G0017600 Rhododendron simsii
RhsimUnG0101800 Rhododendron simsii
Sabra01G0046500 Salix brachista
Sabra03G0118500 Salix brachista
Sabra12G0079000 Salix brachista
Sabra15G0126000 Salix brachista
SalBow1G7353 Salvia bowleyana
SalBow2G0780 Salvia bowleyana
Sc11g0000120 Simmondsia chinensis
Sed0006357 Sechium edule
Sed0027950 Sechium edule
SEGI_04955 Sequoiadendron giganteum
SEGI_11109 Sequoiadendron giganteum
SEGI_15793 Sequoiadendron giganteum
SEGI_15831 Sequoiadendron giganteum
SEGI_15899 Sequoiadendron giganteum
SEGI_25002 Sequoiadendron giganteum
SEGI_29537 Sequoiadendron giganteum
SEGI_31691 Sequoiadendron giganteum
SEGI_35765 Sequoiadendron giganteum
SEGI_36760 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15678 Striga asiatica
SHI04124 Sapria himalayana
SMO111G0168 Selaginella moellendorffii
SMO115G0244 Selaginella moellendorffii
SMO351G0173 Selaginella moellendorffii
Solyc01g065900.3 Solanum lycopersicum
Solyc03g118230.3 Solanum lycopersicum
Solyc04g045430.4 Solanum lycopersicum
Solyc09g015150.1 Solanum lycopersicum
Sopen03g037140 Solanum pennellii
Sopen04g017230 Solanum pennellii
Sopen09g008430 Solanum pennellii
Sp4g15890 Schrenkiella parvula
TAR371G1050 Trochodendron aralioides
TAR374G1592 Trochodendron aralioides
TAR475G0008 Trochodendron aralioides
TAR622G0948 Trochodendron aralioides
THA.LOC104812603 Tarenaya hassleriana
THA.LOC104814208 Tarenaya hassleriana
Thecc.02G193200 Theobroma cacao
Thecc.03G139900 Theobroma cacao
Thhalv10016974m.g Eutrema salsugineum
TPR.G12847 Trifolium pratense
TPR.G35704 Trifolium pratense
TPR.G40627 Trifolium pratense
TPR.G867 Trifolium pratense
TWI18G1224 Tripterygium wilfordii
TWI36G0118 Tripterygium wilfordii
TWI75G0641 Tripterygium wilfordii
unitig_22.g6378 Utricularia gibba
unitig_8.g3117 Utricularia gibba
vmacro01022 Vaccinium macrocarpon
VMungo0251G0975 Vigna mungo
VMungo0720G0377 Vigna mungo
VMungo1383G0533 Vigna mungo
Zm00001eb084860 Zea mays
Zm00001eb142600 Zea mays
Zm00001eb180800 Zea mays
Zm00001eb242030 Zea mays
Zm00001eb421380 Zea mays

User provided reference genes

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