Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10610 Brassica napus
A06p22130 Brassica napus
A10p18660 Brassica napus
Aa31LG4G13720 Aethionema arabicum
Aa31LG4G13750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1756 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3374 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3380 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4315 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2426 Anthoceros agrestis
Actinidia34732 Actinidia chinensis
Actinidia35476 Actinidia chinensis
Actinidia37065 Actinidia chinensis
Ah.04g153400 Amaranthus hybridus
AL5G22260 Arabidopsis lyrata
AL6G33120 Arabidopsis lyrata
Aqoxy1G00666 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5RDT37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0CASP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J53S6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NV5ZPH Arachis hypogaea
AT3G44190 Arabidopsis thaliana
AT5G22140 Arabidopsis thaliana
ATR0686G123 Amborella trichopoda
ATR0686G173 Amborella trichopoda
ATR0772G054 Amborella trichopoda
Atru.chr12.1072 Acer truncatum
Atru.chr3.3129 Acer truncatum
AUR62035331 Chenopodium quinoa
AUR62035912 Chenopodium quinoa
BcaB01g01190 Brassica carinata
BcaB01g04739 Brassica carinata
BcaB05g22746 Brassica carinata
BcaB08g36451 Brassica carinata
BcaC01g02069 Brassica carinata
BcaC01g02107 Brassica carinata
BcaC03g13865 Brassica carinata
BcaC04g19541 Brassica carinata
BcaC04g19544 Brassica carinata
BcaC05g27896 Brassica carinata
BcaC08g43876 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00820 Brassica napus
BolC2t07142H Brassica oleracea
BolC3t19148H Brassica oleracea
BolC5t32641H Brassica oleracea
BolC9t58320H Brassica oleracea
BolC9t58321H Brassica oleracea
BolC9t58550H Brassica oleracea
BolC9t58551H Brassica oleracea
BolC9t59497H Brassica oleracea
BraA02t05643Z Brassica rapa
BraA03t10373Z Brassica rapa
BraA06t25303Z Brassica rapa
BraA10t43945Z Brassica rapa
C02p10710 Brassica napus
C03p68930 Brassica napus
C09p54540 Brassica napus
CAN.G143.26 Capsicum annuum
CAN.G143.27 Capsicum annuum
CAN.G143.28 Capsicum annuum
CAN.G1433.4 Capsicum annuum
CAN.G689.12 Capsicum annuum
CAN.G92.1 Capsicum annuum
CANSAT54G2037 Cannabis sativa
CANSAT56G4253 Cannabis sativa
CANSAT56G4437 Cannabis sativa
CARHR152960 Cardamine hirsuta
CARHR191390 Cardamine hirsuta
Carub.0005s0994 Capsella rubella
Carub.0006s1978 Capsella rubella
Ca_26428_v3 Cicer arietinum L.
Ca_26429_v3 Cicer arietinum L.
CBR_g17681 Chara braunii
CBR_g20978 Chara braunii
Cc00_g24970 Coffea canephora
Cc01_g08540 Coffea canephora
Cc02_g09380 Coffea canephora
CDE02G3220 Ceratophyllum demersum
CDE06G0524 Ceratophyllum demersum
Cfa009943 Carpinus fangiana
Cfa009944 Carpinus fangiana
Cfa023807 Carpinus fangiana
Ciclev10018036m.g Citrus clementina
Ciclev10028687m.g Citrus clementina
CiPaw.13G043600 Carya illinoinensis
CiPaw.14G095000 Carya illinoinensis
ClCG01G011520 Citrullus lanatus
ClCG05G021940 Citrullus lanatus
COL.COLO4_10194 Corchorus olitorius
Cpa.g.sc754.3 Carica papaya
Cre12.g555803 Chlamydomonas reinhardtii
Cre12.g556228 Chlamydomonas reinhardtii
CsaV3_1G015280 Cucumis sativus L.
CsaV3_5G035200 Cucumis sativus L.
CSS0022345 Camellia sinensis var. sinensis
CSS0023522 Camellia sinensis var. sinensis
CSS0034317 Camellia sinensis var. sinensis
DCAR_018200 Daucus carota
DCAR_027895 Daucus carota
Dinv08586 Davidia involucrata
Dinv17092 Davidia involucrata
Duzib168G0443 Durio zibethinus
Duzib170G0458 Durio zibethinus
ECA232G0048 Erigeron canadensis
ECA238G0852 Erigeron canadensis
EL10Ac3g06749 Beta vulgaris
Eucgr.B03822 Eucalyptus grandis
Eucgr.G02679 Eucalyptus grandis
Eucgr.J00288 Eucalyptus grandis
FAN11G1042 Fragaria x ananassa
FAN21G3592 Fragaria x ananassa
FAN25G2624 Fragaria x ananassa
FvH4_3g26670 Fragaria vesca
Glyma.11G179300 Glycine max
Glyma.11G179400 Glycine max
Glyma.12G093900 Glycine max
Glyma.12G094000 Glycine max
Glyma.12G094100 Glycine max
Gohir.A07G113000 Gossypium hirsutum
Gohir.A13G221900 Gossypium hirsutum
Gohir.D07G116500 Gossypium hirsutum
Gohir.D13G225900 Gossypium hirsutum
Gorai.001G125100 Gossypium raimondii
Gorai.013G256800 Gossypium raimondii
GSVIVG01034628001 Vitis vinifera
GSVIVG01037560001 Vitis vinifera
HanXRQChr05g0146151 Helianthus annuus
HanXRQChr14g0432361 Helianthus annuus
Haze_23310 Corylus avellana
Haze_23314 Corylus avellana
Haze_23315 Corylus avellana
Hma1.2p1_0101F.1_g049340 Hydrangea macrophylla
Hma1.2p1_0101F.1_g049360 Hydrangea macrophylla
Hma1.2p1_0926F.1_g237520 Hydrangea macrophylla
HPP92_005753 Vanilla planifolia
HPP92_005787 Vanilla planifolia
HPP92_005799 Vanilla planifolia
HPP92_017138 Vanilla planifolia
Lalb_Chr01g0005001 Lupinus albus
Lalb_Chr01g0005011 Lupinus albus
Lalb_Chr03g0028371 Lupinus albus
Lj1A265T34 Lonicera japonica
Lj3A923T54 Lonicera japonica
Lj3g0017539 Lotus japonicus
Lj3g0019995 Lotus japonicus
Lsat_1_v5_gn_0_21141 Lactuca sativa
Lsat_1_v5_gn_2_33761 Lactuca sativa
Manes.02G202900 Manihot esculenta
Mapoly0070s0041 Marchantia polymorpha
Mapoly0121s0004 Marchantia polymorpha
MBI01_g04532_MAGBIO Magnolia biondii
MBI17_g09804_MAGBIO Magnolia biondii
MBI17_g09805_MAGBIO Magnolia biondii
MBI17_g40151_MAGBIO Magnolia biondii
MCO03G192 Micromonas commoda
MCO05G216 Micromonas commoda
MCO09G701 Micromonas commoda
MCO10G175 Micromonas commoda
MD00G1071200 Malus domestica
MD02G1258500 Malus domestica
Medtr2g061440 Medicago truncatula
Medtr4g051622 Medicago truncatula
Medtr4g051645 Medicago truncatula
MELO3C012334.2 Cucumis melo
Migut.D02370 Erythranthe guttata
Migut.D02393 Erythranthe guttata
Migut.F00846 Erythranthe guttata
MSTRG.18787 Avicennia marina
MSTRG.27552 Avicennia marina
Nitab4.5_0000687g0200 Nicotiana tabacum
Nitab4.5_0001781g0170 Nicotiana tabacum
Nitab4.5_0003419g0010 Nicotiana tabacum
Nitab4.5_0006688g0010 Nicotiana tabacum
Nitab4.5_0007799g0010 Nicotiana tabacum
Nitab4.5_0008285g0010 Nicotiana tabacum
Nitab4.5_0011469g0010 Nicotiana tabacum
Nn2g14298 Nelumbo nucifera
Nn6g34698 Nelumbo nucifera
Oeu048839.1 Olea europaea
Os02g0150300 Oryza sativa ssp. japonica
Os11g0158200 Oryza sativa ssp. japonica
Peaxi162Scf00120g01530 Petunia axillaris
Peaxi162Scf00429g00714 Petunia axillaris
Peaxi162Scf00519g00049 Petunia axillaris
Peaxi162Scf00649g00045 Petunia axillaris
Peaxi162Scf00725g00527 Petunia axillaris
PGR102G0444 Punica granatum
PGR142G0523 Punica granatum
PGR142G3093 Punica granatum
PGSC0003DMG400023398 Solanum tuberosum
PGSC0003DMG402001978 Solanum tuberosum
Phvul.011G098300 Phaseolus vulgaris
Phvul.011G098400 Phaseolus vulgaris
Phvul.011G098500 Phaseolus vulgaris
Potri.001G217800 Populus trichocarpa
Pp3c16_18890 Physcomitrium patens
Pp3c6_7760 Physcomitrium patens
Pp3s30_930 Physcomitrium patens
Pp3s30_931 Physcomitrium patens
PRCOL_00001845 Prasinoderma coloniale
Prupe.2G072100 Prunus persica
Prupe.6G143400 Prunus persica
Psat7g186000 Pisum sativum
Psat7g186040 Pisum sativum
PSO339G2150 Papaver somniferum
PSO339G2607 Papaver somniferum
PSO384G1562 Papaver somniferum
PSO384G4674 Papaver somniferum
PSO478G3195 Papaver somniferum
PSO782G2252 Papaver somniferum
PSO782G5308 Papaver somniferum
QL01p011172 Quercus lobata
QL04p047911 Quercus lobata
RcHm_v2.0_Chr5g0048121 Rosa chinensis
Rhsim01G0201600 Rhododendron simsii
Rhsim01G0201700 Rhododendron simsii
Rhsim09G0141000 Rhododendron simsii
Sabra16G0126100 Salix brachista
SalBow3G1476 Salvia bowleyana
Sc07g0003120 Simmondsia chinensis
Sc09g0005100 Simmondsia chinensis
Sc09g0005110 Simmondsia chinensis
Sed0017145 Sechium edule
Sed0025149 Sechium edule
SEGI_01692 Sequoiadendron giganteum
SEGI_07275 Sequoiadendron giganteum
SEGI_07884 Sequoiadendron giganteum
SEGI_09061 Sequoiadendron giganteum
SEGI_14516 Sequoiadendron giganteum
SEGI_16166 Sequoiadendron giganteum
SEGI_20138 Sequoiadendron giganteum
SEGI_21182 Sequoiadendron giganteum
SEGI_25576 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29632 Striga asiatica
SGA_v2.0_scaffold887G53694 Striga asiatica
SHI19175 Sapria himalayana
SHI19176 Sapria himalayana
SMO124G0002 Selaginella moellendorffii
Solyc05g055180.3 Solanum lycopersicum
Solyc11g006540.2 Solanum lycopersicum
Solyc11g042760.1 Solanum lycopersicum
Solyc11g071440.2 Solanum lycopersicum
Solyc11g071990.2 Solanum lycopersicum
Sopen05g033600 Solanum pennellii
Sopen11g002440 Solanum pennellii
Sopen11g029650 Solanum pennellii
Sp5g17130 Schrenkiella parvula
Sp6g23040 Schrenkiella parvula
TAR633G2788 Trochodendron aralioides
TAR636G2585 Trochodendron aralioides
THA.LOC104799565 Tarenaya hassleriana
Thecc.09G274100 Theobroma cacao
Thhalv10013885m.g Eutrema salsugineum
TPR.G4633 Trifolium pratense
TPR.G4670 Trifolium pratense
TWI31G0172 Tripterygium wilfordii
TWI31G1293 Tripterygium wilfordii
unitig_46.g18645 Utricularia gibba
vmacro10322 Vaccinium macrocarpon
vmacro14323 Vaccinium macrocarpon
vmacro14324 Vaccinium macrocarpon
VMungo0331G1828 Vigna mungo
VMungo1127G0594 Vigna mungo
VMungo1127G1774 Vigna mungo
VMungo1127G2202 Vigna mungo
Zm00001eb207980 Zea mays
Zm00001eb323980 Zea mays
Zm00001eb365150 Zea mays

User provided reference genes

Program Settings