Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25510 Brassica napus
A05p01590 Brassica napus
A06p12240 Brassica napus
A07p27100 Brassica napus
Aa31LG1G27600 Aethionema arabicum
Aa31LG4G1500 Aethionema arabicum
Aa31LG7G840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4384 Anthoceros agrestis
Actinidia28483 Actinidia chinensis
AL1G28440 Arabidopsis lyrata
AL2G40130 Arabidopsis lyrata
AL4G45480 Arabidopsis lyrata
AL891U10010 Arabidopsis lyrata
Aqoxy1G01405 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05C3SW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XT8EU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4XZDE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PM7ZWD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2D0FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3578E Arachis hypogaea
AT1G16320 Arabidopsis thaliana
AT1G79510 Arabidopsis thaliana
AT2G46220 Arabidopsis thaliana
ATR0329G068 Amborella trichopoda
ATR1131G064 Amborella trichopoda
Atru.chr1.69 Acer truncatum
Atru.chr5.602 Acer truncatum
AUR62004424 Chenopodium quinoa
AUR62022630 Chenopodium quinoa
BcaB01g03235 Brassica carinata
BcaB02g06611 Brassica carinata
BcaB02g07219 Brassica carinata
BcaB03g13043 Brassica carinata
BcaC01g05091 Brassica carinata
BcaC02g12507 Brassica carinata
BcaC02g12704 Brassica carinata
BcaC05g25583 Brassica carinata
BcaC08g45350 Brassica carinata
BolC3t15391H Brassica oleracea
BolC5t30174H Brassica oleracea
BolC6t38146H Brassica oleracea
BraA03t11768Z Brassica rapa
BraA05t19154Z Brassica rapa
BraA06t24392Z Brassica rapa
BraA07t30355Z Brassica rapa
C03p30430 Brassica napus
C04p01810 Brassica napus
C05p14490 Brassica napus
CAN.G602.8 Capsicum annuum
CAN.G78.140 Capsicum annuum
CANSAT56G2736 Cannabis sativa
CANSAT56G2893 Cannabis sativa
CARHR016790 Cardamine hirsuta
CARHR073170 Cardamine hirsuta
CARHR141490 Cardamine hirsuta
Carub.0001s1606 Capsella rubella
Carub.0002s2637 Capsella rubella
Carub.0004s2890 Capsella rubella
Ca_03173_v3 Cicer arietinum L.
Ca_03487_v3 Cicer arietinum L.
CBR_g20268 Chara braunii
Cc02_g38730 Coffea canephora
Cc05_g16510 Coffea canephora
CDE02G2738 Ceratophyllum demersum
CDE04G1514 Ceratophyllum demersum
CDE06G1910 Ceratophyllum demersum
CDE10G0725 Ceratophyllum demersum
CDE10G0880 Ceratophyllum demersum
CDE10G1032 Ceratophyllum demersum
CDE10G1313 Ceratophyllum demersum
Cfa019384 Carpinus fangiana
Ciclev10005641m.g Citrus clementina
Ciclev10021974m.g Citrus clementina
CiPaw.02G036900 Carya illinoinensis
CiPaw.11G058300 Carya illinoinensis
ClCG11G008240 Citrullus lanatus
COL.COLO4_04572 Corchorus olitorius
COL.COLO4_06366 Corchorus olitorius
Cpa.g.sc184.15 Carica papaya
Cpa.g.sc32.76 Carica papaya
Cre01.g047218 Chlamydomonas reinhardtii
Cre17.g731100 Chlamydomonas reinhardtii
CsaV3_2G033420 Cucumis sativus L.
CSS0011899 Camellia sinensis var. sinensis
CSS0020906 Camellia sinensis var. sinensis
CSS0021990 Camellia sinensis var. sinensis
CSS0036643 Camellia sinensis var. sinensis
CSS0042455 Camellia sinensis var. sinensis
DCAR_008643 Daucus carota
DCAR_013718 Daucus carota
DCAR_016848 Daucus carota
Duzib133G1226 Durio zibethinus
Duzib138G1781 Durio zibethinus
Duzib187G0591 Durio zibethinus
Duzib268G1315 Durio zibethinus
ECA236G2071 Erigeron canadensis
EL10Ac1g00339 Beta vulgaris
Eucgr.A00003 Eucalyptus grandis
Eucgr.E00085 Eucalyptus grandis
FAN01G2644 Fragaria x ananassa
FAN03G0161 Fragaria x ananassa
FAN05G0983 Fragaria x ananassa
FAN06G2411 Fragaria x ananassa
FAN06G4053 Fragaria x ananassa
FAN10G0527 Fragaria x ananassa
FAN10G4069 Fragaria x ananassa
FAN11G2418 Fragaria x ananassa
FAN16G0978 Fragaria x ananassa
FAN21G0183 Fragaria x ananassa
FAN25G2834 Fragaria x ananassa
FvH4_3g14540 Fragaria vesca
FvH4_3g40730 Fragaria vesca
FvH4_3g40750 Fragaria vesca
FvH4_7g15580 Fragaria vesca
Glyma.07G062300 Glycine max
Glyma.08G164500 Glycine max
Glyma.08G235000 Glycine max
Glyma.15G262600 Glycine max
Glyma.16G030300 Glycine max
Gohir.A08G032100 Gossypium hirsutum
Gohir.A08G033400 Gossypium hirsutum
Gohir.A11G219900 Gossypium hirsutum
Gohir.D08G043000 Gossypium hirsutum
Gohir.D08G044100 Gossypium hirsutum
Gorai.004G041600 Gossypium raimondii
Gorai.004G042900 Gossypium raimondii
GSVIVG01027017001 Vitis vinifera
GSVIVG01036740001 Vitis vinifera
HanXRQChr03g0093431 Helianthus annuus
HanXRQChr11g0321941 Helianthus annuus
Haze_07783 Corylus avellana
Hma1.2p1_0151F.1_g067130 Hydrangea macrophylla
Hma1.2p1_0384F.1_g140730 Hydrangea macrophylla
Hma1.2p1_0783F.1_g217000 Hydrangea macrophylla
HPP92_000529 Vanilla planifolia
HPP92_011008 Vanilla planifolia
HPP92_016696 Vanilla planifolia
Hund16679 Selenicereus undatus
Hund20119 Selenicereus undatus
Hund27236 Selenicereus undatus
Lalb_Chr04g0261811 Lupinus albus
Lalb_Chr15g0076101 Lupinus albus
Lalb_Chr25g0284441 Lupinus albus
Lj2C12T15 Lonicera japonica
Lj3g0005347 Lotus japonicus
Lj3g0009024 Lotus japonicus
Lj3g0021491 Lotus japonicus
Lj9C594G20 Lonicera japonica
Lsat_1_v5_gn_3_138521 Lactuca sativa
Lsat_1_v5_gn_7_110880 Lactuca sativa
Manes.01G251300 Manihot esculenta
Manes.16G047400 Manihot esculenta
Mapoly0082s0009 Marchantia polymorpha
MCO04G324 Micromonas commoda
MD01G1073100 Malus domestica
MD05G1235700 Malus domestica
MD10G1212200 Malus domestica
Medtr2g064370 Medicago truncatula
Medtr8g028425 Medicago truncatula
Medtr8g046460 Medicago truncatula
MELO3C008114.2 Cucumis melo
Migut.B01812 Erythranthe guttata
Migut.H01659 Erythranthe guttata
MSTRG.14570 Avicennia marina
MSTRG.4830 Avicennia marina
Nitab4.5_0000305g0350 Nicotiana tabacum
Nitab4.5_0002926g0020 Nicotiana tabacum
Nitab4.5_0003291g0070 Nicotiana tabacum
Nitab4.5_0003779g0130 Nicotiana tabacum
Nitab4.5_0009475g0020 Nicotiana tabacum
Nn1g01744 Nelumbo nucifera
Nn7g37324 Nelumbo nucifera
Nn7g38310 Nelumbo nucifera
Oeu005066.1 Olea europaea
Oeu023794.1 Olea europaea
Oeu026001.1 Olea europaea
Oeu054365.1 Olea europaea
Os01g0221500 Oryza sativa ssp. japonica
Os04g0613300 Oryza sativa ssp. japonica
Os05g0215600 Oryza sativa ssp. japonica
Peaxi162Scf00403g00833 Petunia axillaris
Peaxi162Scf01254g00026 Petunia axillaris
PGR042G2959 Punica granatum
PGR042G3909 Punica granatum
PGSC0003DMG400000075 Solanum tuberosum
PGSC0003DMG400033873 Solanum tuberosum
Phvul.005G049000 Phaseolus vulgaris
Phvul.006G108800 Phaseolus vulgaris
Phvul.010G105700 Phaseolus vulgaris
Phvul.011G178900 Phaseolus vulgaris
Potri.008G083400 Populus trichocarpa
Potri.010G173000 Populus trichocarpa
Potri.014G092200 Populus trichocarpa
Pp3c11_4620 Physcomitrium patens
Pp3c1_3310 Physcomitrium patens
Pp3c2_29320 Physcomitrium patens
PRCOL_00005450 Prasinoderma coloniale
Prupe.2G179500 Prunus persica
Prupe.4G130800 Prunus persica
Psat1g011600 Pisum sativum
Psat4g157240 Pisum sativum
Psat4g170520 Pisum sativum
PSO135G0267 Papaver somniferum
PSO384G1843 Papaver somniferum
PSO541G2937 Papaver somniferum
PSO675G5855 Papaver somniferum
QL04p059084 Quercus lobata
QL04p091467 Quercus lobata
QL04p092859 Quercus lobata
RcHm_v2.0_Chr1g0358261 Rosa chinensis
RcHm_v2.0_Chr5g0023911 Rosa chinensis
Rhsim01G0168200 Rhododendron simsii
Rhsim06G0243400 Rhododendron simsii
Sabra08G0061700 Salix brachista
Sabra10G0132500 Salix brachista
Sabra14G0066800 Salix brachista
SalBow4G1649 Salvia bowleyana
SalBow5G3780 Salvia bowleyana
SalBow8G0636 Salvia bowleyana
SalBow8G1988 Salvia bowleyana
SalBow8G3188 Salvia bowleyana
Sc23g0002460 Simmondsia chinensis
Sc26g0000810 Simmondsia chinensis
Sed0004294 Sechium edule
Sed0014231 Sechium edule
SEGI_21370 Sequoiadendron giganteum
SEGI_31894 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07061 Striga asiatica
SGA_v2.0_scaffold239G44015 Striga asiatica
SGA_v2.0_scaffold4G02270 Striga asiatica
SMO014G0031 Selaginella moellendorffii
SMO307G0010 Selaginella moellendorffii
Solyc01g095270.3 Solanum lycopersicum
Solyc05g050110.3 Solanum lycopersicum
Sopen01g039060 Solanum pennellii
Sopen05g028490 Solanum pennellii
Sp1g14510 Schrenkiella parvula
Sp4g28260 Schrenkiella parvula
Sp5g34560 Schrenkiella parvula
TAR376G0041 Trochodendron aralioides
TAR623G0187 Trochodendron aralioides
TAR624G0110 Trochodendron aralioides
TAR629G0280 Trochodendron aralioides
TAR629G3238 Trochodendron aralioides
THA.LOC104802051 Tarenaya hassleriana
THA.LOC104808135 Tarenaya hassleriana
THA.LOC104813605 Tarenaya hassleriana
THA.LOC104827610 Tarenaya hassleriana
Thecc.01G350300 Theobroma cacao
Thecc.07G187600 Theobroma cacao
Thhalv10001605m.g Eutrema salsugineum
Thhalv10008440m.g Eutrema salsugineum
Thhalv10019001m.g Eutrema salsugineum
TPR.G18162 Trifolium pratense
TPR.G27464 Trifolium pratense
TPR.G9406 Trifolium pratense
TWI38G2021 Tripterygium wilfordii
TWI59G0857 Tripterygium wilfordii
unitig_0.g333 Utricularia gibba
unitig_578.g16051 Utricularia gibba
unitig_699.g19805 Utricularia gibba
VMungo0331G0494 Vigna mungo
VMungo1080G0531 Vigna mungo
VMungo1127G0604 Vigna mungo
Zm00001eb070970 Zea mays
Zm00001eb119660 Zea mays
Zm00001eb338880 Zea mays
Zm00001eb389970 Zea mays
Zm00001eb430750 Zea mays

User provided reference genes

Program Settings