Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22020 Brassica napus
A05p07100 Brassica napus
A07p22420 Brassica napus
Aa31LG10G10080 Aethionema arabicum
Aa31LG5G20280 Aethionema arabicum
Actinidia03008 Actinidia chinensis
Actinidia38230 Actinidia chinensis
Ah.04g149920 Amaranthus hybridus
Ah.10g033160 Amaranthus hybridus
Ah.13g077540 Amaranthus hybridus
Ah.13g077560 Amaranthus hybridus
AL4G36620 Arabidopsis lyrata
AL4G36640 Arabidopsis lyrata
AL5G36180 Arabidopsis lyrata
Aqoxy7G03758 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7RD402 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YI1C88 Arachis hypogaea
AT2G39300 Arabidopsis thaliana
AT3G55060 Arabidopsis thaliana
ATR0307G086 Amborella trichopoda
ATR1096G020 Amborella trichopoda
Atru.chr12.601 Acer truncatum
AUR62018473 Chenopodium quinoa
AUR62020951 Chenopodium quinoa
BcaB01g03601 Brassica carinata
BcaB01g03661 Brassica carinata
BcaB02g07700 Brassica carinata
BcaB02g09136 Brassica carinata
BcaC02g12048 Brassica carinata
BcaC08g44721 Brassica carinata
BolC4t22447H Brassica oleracea
BolC6t37450H Brassica oleracea
BraA03t11437Z Brassica rapa
BraA05t19675Z Brassica rapa
BraA07t29918Z Brassica rapa
C03p26100 Brassica napus
C04p08480 Brassica napus
C06p22590 Brassica napus
CAN.G1039.3 Capsicum annuum
CAN.G1039.4 Capsicum annuum
CAN.G10644.1 Capsicum annuum
CAN.G10736.1 Capsicum annuum
CAN.G11366.1 Capsicum annuum
CAN.G134.141 Capsicum annuum
CAN.G134.143 Capsicum annuum
CAN.G134.144 Capsicum annuum
CAN.G134.146 Capsicum annuum
CAN.G134.149 Capsicum annuum
CAN.G134.152 Capsicum annuum
CAN.G1353.11 Capsicum annuum
CAN.G1353.12 Capsicum annuum
CAN.G1353.17 Capsicum annuum
CAN.G1353.26 Capsicum annuum
CAN.G1353.7 Capsicum annuum
CAN.G1465.17 Capsicum annuum
CAN.G1484.14 Capsicum annuum
CAN.G1484.15 Capsicum annuum
CAN.G1563.4 Capsicum annuum
CAN.G1563.5 Capsicum annuum
CAN.G1563.6 Capsicum annuum
CAN.G1563.7 Capsicum annuum
CAN.G1578.25 Capsicum annuum
CAN.G1579.2 Capsicum annuum
CAN.G1579.3 Capsicum annuum
CAN.G1579.5 Capsicum annuum
CAN.G1579.6 Capsicum annuum
CAN.G1669.11 Capsicum annuum
CAN.G1669.12 Capsicum annuum
CAN.G1669.3 Capsicum annuum
CAN.G1669.6 Capsicum annuum
CAN.G1669.9 Capsicum annuum
CAN.G1703.4 Capsicum annuum
CAN.G1703.5 Capsicum annuum
CAN.G1703.7 Capsicum annuum
CAN.G1703.8 Capsicum annuum
CAN.G1751.10 Capsicum annuum
CAN.G1751.11 Capsicum annuum
CAN.G1751.14 Capsicum annuum
CAN.G1751.15 Capsicum annuum
CAN.G1783.3 Capsicum annuum
CAN.G2026.3 Capsicum annuum
CAN.G2026.5 Capsicum annuum
CAN.G2026.6 Capsicum annuum
CAN.G2026.8 Capsicum annuum
CAN.G20522.1 Capsicum annuum
CAN.G2070.1 Capsicum annuum
CAN.G2101.2 Capsicum annuum
CAN.G2462.1 Capsicum annuum
CAN.G2764.1 Capsicum annuum
CAN.G2802.2 Capsicum annuum
CAN.G282.58 Capsicum annuum
CAN.G282.59 Capsicum annuum
CAN.G309.105 Capsicum annuum
CAN.G309.108 Capsicum annuum
CAN.G309.111 Capsicum annuum
CAN.G309.118 Capsicum annuum
CAN.G309.119 Capsicum annuum
CAN.G309.122 Capsicum annuum
CAN.G309.127 Capsicum annuum
CAN.G309.133 Capsicum annuum
CAN.G309.140 Capsicum annuum
CAN.G309.141 Capsicum annuum
CAN.G309.142 Capsicum annuum
CAN.G309.97 Capsicum annuum
CAN.G337.10 Capsicum annuum
CAN.G3770.1 Capsicum annuum
CAN.G4577.1 Capsicum annuum
CAN.G486.2 Capsicum annuum
CAN.G486.4 Capsicum annuum
CAN.G5118.1 Capsicum annuum
CAN.G551.1 Capsicum annuum
CAN.G567.117 Capsicum annuum
CAN.G567.120 Capsicum annuum
CAN.G567.121 Capsicum annuum
CAN.G5735.1 Capsicum annuum
CAN.G575.109 Capsicum annuum
CAN.G575.110 Capsicum annuum
CAN.G575.111 Capsicum annuum
CAN.G5998.1 Capsicum annuum
CAN.G6001.1 Capsicum annuum
CAN.G6741.1 Capsicum annuum
CAN.G710.67 Capsicum annuum
CAN.G710.69 Capsicum annuum
CAN.G7504.1 Capsicum annuum
CAN.G792.1 Capsicum annuum
CAN.G792.3 Capsicum annuum
CAN.G792.5 Capsicum annuum
CAN.G792.6 Capsicum annuum
CAN.G792.7 Capsicum annuum
CANSAT35G0792 Cannabis sativa
CARHR134050 Cardamine hirsuta
CARHR165080 Cardamine hirsuta
Carub.0004s2135 Capsella rubella
Carub.0005s2169 Capsella rubella
Ca_11341_v3 Cicer arietinum L.
Ca_30327_v3 Cicer arietinum L.
Cc02_g08710 Coffea canephora
CDE08G0209 Ceratophyllum demersum
CDE09G0657 Ceratophyllum demersum
Cfa001564 Carpinus fangiana
Ciclev10030639m.g Citrus clementina
CiPaw.01G279100 Carya illinoinensis
ClCG02G013700 Citrullus lanatus
ClCG09G020340 Citrullus lanatus
COL.COLO4_06777 Corchorus olitorius
Cpa.g.sc10.58 Carica papaya
Cpa.g.sc10.59 Carica papaya
CsaV3_5G006490 Cucumis sativus L.
CsaV3_5G026090 Cucumis sativus L.
CSS0011254 Camellia sinensis var. sinensis
CSS0012201 Camellia sinensis var. sinensis
DCAR_015261 Daucus carota
DCAR_031727 Daucus carota
Dinv25940 Davidia involucrata
Dinv31385 Davidia involucrata
Duzib114G0996 Durio zibethinus
Duzib128G0274 Durio zibethinus
ECA238G0038 Erigeron canadensis
ECA238G3961 Erigeron canadensis
EL10Ac2g03516 Beta vulgaris
EL10Ac3g07389 Beta vulgaris
Eucgr.G02780 Eucalyptus grandis
FAN01G2220 Fragaria x ananassa
FAN01G2755 Fragaria x ananassa
FAN03G2748 Fragaria x ananassa
FAN06G0455 Fragaria x ananassa
FAN06G4611 Fragaria x ananassa
FAN10G2555 Fragaria x ananassa
FvH4_7g20660 Fragaria vesca
Glyma.10G292800 Glycine max
Glyma.20G243000 Glycine max
Gohir.A05G343300 Gossypium hirsutum
Gohir.A06G179010 Gossypium hirsutum
Gohir.A10G208600 Gossypium hirsutum
Gohir.D04G081600 Gossypium hirsutum
Gohir.D06G173800 Gossypium hirsutum
Gohir.D10G216901 Gossypium hirsutum
Gorai.010G203400 Gossypium raimondii
Gorai.011G242500 Gossypium raimondii
Gorai.012G092100 Gossypium raimondii
GSVIVG01032635001 Vitis vinifera
HanXRQChr07g0200471 Helianthus annuus
HanXRQChr14g0460781 Helianthus annuus
Haze_16965 Corylus avellana
Hma1.2p1_0207F.1_g088000 Hydrangea macrophylla
HPP92_021170 Vanilla planifolia
Hund19043 Selenicereus undatus
Hund19284 Selenicereus undatus
Lalb_Chr02g0143821 Lupinus albus
Lalb_Chr06g0164081 Lupinus albus
Lj1A929T68 Lonicera japonica
Lj1C927T17 Lonicera japonica
Lj1C927T18 Lonicera japonica
Lj5g0003286 Lotus japonicus
Lj8A93T66 Lonicera japonica
Lsat_1_v5_gn_2_115260 Lactuca sativa
Manes.07G106100 Manihot esculenta
Manes.10G039900 Manihot esculenta
MBI13_g32814_MAGBIO Magnolia biondii
MD07G1183400 Malus domestica
Medtr1g116070 Medicago truncatula
Medtr5g055130 Medicago truncatula
MELO3C011711.2 Cucumis melo
MELO3C025489.2 Cucumis melo
Migut.F01537 Erythranthe guttata
MSTRG.313 Avicennia marina
MSTRG.8231 Avicennia marina
Nitab4.5_0000914g0070 Nicotiana tabacum
Nitab4.5_0003965g0010 Nicotiana tabacum
Nn2g14619 Nelumbo nucifera
Oeu034489.1 Olea europaea
Oeu050634.1 Olea europaea
Oeu058329.1 Olea europaea
Os03g0322000 Oryza sativa ssp. japonica
Os07g0686400 Oryza sativa ssp. japonica
Peaxi162Scf00015g00273 Petunia axillaris
PGR142G2021 Punica granatum
PGSC0003DMG401023504 Solanum tuberosum
Phvul.007G007200 Phaseolus vulgaris
Potri.008G047200 Populus trichocarpa
Potri.010G214300 Populus trichocarpa
Prupe.2G222100 Prunus persica
Psat6g239640 Pisum sativum
PSO017G1865 Papaver somniferum
PSO063G5989 Papaver somniferum
PSO063G6194 Papaver somniferum
PSO421G0235 Papaver somniferum
QL08p057433 Quercus lobata
RcHm_v2.0_Chr1g0364701 Rosa chinensis
Rhsim03G0121000 Rhododendron simsii
Sabra08G0033400 Salix brachista
Sabra10G0165700 Salix brachista
SalBow6G2073 Salvia bowleyana
Sc06g0001850 Simmondsia chinensis
Sed0005867 Sechium edule
Sed0009032 Sechium edule
Sed0025529 Sechium edule
SEGI_17086 Sequoiadendron giganteum
SEGI_21585 Sequoiadendron giganteum
SEGI_23819 Sequoiadendron giganteum
SEGI_38280 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04439 Striga asiatica
SHI28186 Sapria himalayana
SMO340G0296 Selaginella moellendorffii
Solyc05g054930.3 Solanum lycopersicum
Sopen05g033390 Solanum pennellii
Sp4g21620 Schrenkiella parvula
Sp5g07360 Schrenkiella parvula
SpUn0018_0050 Schrenkiella parvula
TAR381G0532 Trochodendron aralioides
TAR633G0496 Trochodendron aralioides
TAR633G1082 Trochodendron aralioides
TAR633G1707 Trochodendron aralioides
THA.LOC104809994 Tarenaya hassleriana
THA.LOC104825243 Tarenaya hassleriana
Thecc.10G063600 Theobroma cacao
Thhalv10010113m.g Eutrema salsugineum
Thhalv10016225m.g Eutrema salsugineum
TPR.G10394 Trifolium pratense
TWI15G0312 Tripterygium wilfordii
TWI63G1198 Tripterygium wilfordii
unitig_26.g10021 Utricularia gibba
unitig_749.g14015 Utricularia gibba
vmacro07106 Vaccinium macrocarpon
VMungo0720G1865 Vigna mungo
Zm00001eb111790 Zea mays
Zm00001eb391420 Zea mays
Zm00001eb391440 Zea mays
Zm00001eb399770 Zea mays
Zm00001eb399780 Zea mays

User provided reference genes

Program Settings