Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00660 Brassica napus
A08p35540 Brassica napus
A10p06120 Brassica napus
A10p33270 Brassica napus
Aa31LG1G22410 Aethionema arabicum
Aa31sc13G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4044 Anthoceros agrestis
Actinidia05311 Actinidia chinensis
Actinidia07036 Actinidia chinensis
Actinidia13143 Actinidia chinensis
Actinidia37204 Actinidia chinensis
Ah.12g062380 Amaranthus hybridus
Ah.15g097300 Amaranthus hybridus
AL1G17810 Arabidopsis lyrata
AL6G11620 Arabidopsis lyrata
Aqoxy4G02918 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6LJ86G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9EM8VP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D53E9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0Y7SM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3EUR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWI603 Arachis hypogaea
AT1G07620 Arabidopsis thaliana
AT5G02390 Arabidopsis thaliana
ATR0559G060 Amborella trichopoda
Atru.chr3.3898 Acer truncatum
Atru.chr8.1972 Acer truncatum
AUR62001789 Chenopodium quinoa
AUR62009577 Chenopodium quinoa
AUR62041766 Chenopodium quinoa
BcaB03g13383 Brassica carinata
BcaC05g24685 Brassica carinata
BcaC06g31985 Brassica carinata
BcaNung05921 Brassica carinata
BolC5t29333H Brassica oleracea
BolC8t47120H Brassica oleracea
BolC9t60151H Brassica oleracea
BraA08t35460Z Brassica rapa
BraA10t45358Z Brassica rapa
C05p05620 Brassica napus
C08p03220 Brassica napus
C09p74180 Brassica napus
CAN.G324.5 Capsicum annuum
CANSAT35G0014 Cannabis sativa
CANSAT54G1460 Cannabis sativa
CARHR007410 Cardamine hirsuta
CARHR211020 Cardamine hirsuta
Carub.0001s0695 Capsella rubella
Carub.0006s0118 Capsella rubella
Ca_01328_v3 Cicer arietinum L.
Ca_20526_v3 Cicer arietinum L.
Ca_30765_v3 Cicer arietinum L.
Cc01_g12840 Coffea canephora
Cc06_g02660 Coffea canephora
CDE04G3739 Ceratophyllum demersum
CDE07G1359 Ceratophyllum demersum
Cfa011498 Carpinus fangiana
Cfa017383 Carpinus fangiana
Ciclev10013810m.g Citrus clementina
Ciclev10027797m.g Citrus clementina
CiPaw.09G192400 Carya illinoinensis
CiPaw.13G094800 Carya illinoinensis
ClCG02G020160 Citrullus lanatus
ClCG04G004860 Citrullus lanatus
COL.COLO4_14800 Corchorus olitorius
COL.COLO4_18507 Corchorus olitorius
Cpa.g.sc81.155 Carica papaya
CsaV3_4G031780 Cucumis sativus L.
CsaV3_6G016870 Cucumis sativus L.
CSS0008176 Camellia sinensis var. sinensis
CSS0015566 Camellia sinensis var. sinensis
CSS0017977 Camellia sinensis var. sinensis
CSS0018360 Camellia sinensis var. sinensis
CSS0020060 Camellia sinensis var. sinensis
CSS0024264 Camellia sinensis var. sinensis
CSS0025806 Camellia sinensis var. sinensis
CSS0028630 Camellia sinensis var. sinensis
CSS0029440 Camellia sinensis var. sinensis
CSS0030774 Camellia sinensis var. sinensis
CSS0034492 Camellia sinensis var. sinensis
CSS0041206 Camellia sinensis var. sinensis
CSS0044145 Camellia sinensis var. sinensis
CSS0045597 Camellia sinensis var. sinensis
CSS0048347 Camellia sinensis var. sinensis
DCAR_005334 Daucus carota
DCAR_005973 Daucus carota
DCAR_009231 Daucus carota
Dinv12421 Davidia involucrata
Dinv16998 Davidia involucrata
Dinv35605 Davidia involucrata
Dinv35606 Davidia involucrata
Dinv42947 Davidia involucrata
Dinv43153 Davidia involucrata
Duzib093G1384 Durio zibethinus
Duzib128G0266 Durio zibethinus
Duzib150G0343 Durio zibethinus
Duzib168G0968 Durio zibethinus
Duzib170G0473 Durio zibethinus
ECA236G1034 Erigeron canadensis
ECA247G2589 Erigeron canadensis
EL10Ac5g11575 Beta vulgaris
EL10Ac7g16016 Beta vulgaris
Eucgr.J02056 Eucalyptus grandis
Eucgr.K03137 Eucalyptus grandis
FAN02G3265 Fragaria x ananassa
FAN05G1797 Fragaria x ananassa
FAN05G5490 Fragaria x ananassa
FAN09G4793 Fragaria x ananassa
FAN11G3380 Fragaria x ananassa
FAN14G0333 Fragaria x ananassa
FAN16G3741 Fragaria x ananassa
FAN21G0377 Fragaria x ananassa
FAN25G0844 Fragaria x ananassa
FvH4_3g36010 Fragaria vesca
FvH4_6g13720 Fragaria vesca
Glyma.03G082500 Glycine max
Glyma.07G112350 Glycine max
Glyma.10G126600 Glycine max
Glyma.13G335900 Glycine max
Glyma.15G038400 Glycine max
Glyma.20G077800 Glycine max
Gohir.A03G042033 Gossypium hirsutum
Gohir.A05G095700 Gossypium hirsutum
Gohir.A11G326700 Gossypium hirsutum
Gohir.D03G125800 Gossypium hirsutum
Gohir.D05G096000 Gossypium hirsutum
Gohir.D11G345600 Gossypium hirsutum
Gorai.003G132000 Gossypium raimondii
Gorai.007G375900 Gossypium raimondii
Gorai.009G099300 Gossypium raimondii
GSVIVG01024972001 Vitis vinifera
GSVIVG01034175001 Vitis vinifera
HanXRQChr02g0035881 Helianthus annuus
HanXRQChr03g0075701 Helianthus annuus
HanXRQChr04g0105731 Helianthus annuus
HanXRQChr15g0470071 Helianthus annuus
Haze_20788 Corylus avellana
Haze_24092 Corylus avellana
HPP92_000806 Vanilla planifolia
HPP92_019190 Vanilla planifolia
HPP92_019199 Vanilla planifolia
Hund04961 Selenicereus undatus
Hund18912 Selenicereus undatus
Lalb_Chr01g0011081 Lupinus albus
Lalb_Chr01g0011091 Lupinus albus
Lalb_Chr03g0036731 Lupinus albus
Lalb_Chr07g0193901 Lupinus albus
Lalb_Chr22g0349941 Lupinus albus
Lalb_Chr24g0394151 Lupinus albus
Lj2A1062T48 Lonicera japonica
Lj2A95G42 Lonicera japonica
Lj3g0010198 Lotus japonicus
Lj3g0026583 Lotus japonicus
Lj6g0009284 Lotus japonicus
Lsat_1_v5_gn_8_109380 Lactuca sativa
Lsat_1_v5_gn_8_73101 Lactuca sativa
Lsat_1_v5_gn_9_23360 Lactuca sativa
Manes.04G034800 Manihot esculenta
Manes.09G091300 Manihot esculenta
Manes.11G128400 Manihot esculenta
Mapoly0001s0174 Marchantia polymorpha
Mapoly0151s0019 Marchantia polymorpha
MBI14_g20110_MAGBIO Magnolia biondii
MD04G1128800 Malus domestica
MD11G1109700 Malus domestica
MD12G1141400 Malus domestica
Medtr1g047660 Medicago truncatula
Medtr2g096870 Medicago truncatula
Medtr4g021865 Medicago truncatula
MELO3C008878.2 Cucumis melo
MELO3C025918.2 Cucumis melo
Migut.D02105 Erythranthe guttata
Migut.L01943 Erythranthe guttata
Migut.N00705 Erythranthe guttata
Nitab4.5_0000202g0110 Nicotiana tabacum
Nitab4.5_0000216g0300 Nicotiana tabacum
Nitab4.5_0002018g0030 Nicotiana tabacum
Nitab4.5_0003753g0020 Nicotiana tabacum
Nitab4.5_0004156g0040 Nicotiana tabacum
Nitab4.5_0006455g0020 Nicotiana tabacum
Nn2g10370 Nelumbo nucifera
Oeu011404.1 Olea europaea
Oeu036148.1 Olea europaea
Oeu054145.1 Olea europaea
Os01g0149900 Oryza sativa ssp. japonica
Os12g0570500 Oryza sativa ssp. japonica
Peaxi162Scf00094g00141 Petunia axillaris
Peaxi162Scf00165g01219 Petunia axillaris
Peaxi162Scf00774g00001 Petunia axillaris
PGR004G0883 Punica granatum
PGR102G2381 Punica granatum
PGR119G0741 Punica granatum
PGSC0003DMG400008910 Solanum tuberosum
PGSC0003DMG400011004 Solanum tuberosum
PGSC0003DMG400030320 Solanum tuberosum
Phvul.007G107700 Phaseolus vulgaris
Phvul.010G012600 Phaseolus vulgaris
Phvul.L005343 Phaseolus vulgaris
Potri.001G239500 Populus trichocarpa
Potri.009G030700 Populus trichocarpa
Potri.016G095500 Populus trichocarpa
Prupe.6G078200 Prunus persica
Prupe.6G254700 Prunus persica
Psat5g284520 Pisum sativum
Psat6g048200 Pisum sativum
Psat7g237000 Pisum sativum
PSO339G4477 Papaver somniferum
PSO384G3367 Papaver somniferum
QL01p032098 Quercus lobata
QL07p048238 Quercus lobata
RcHm_v2.0_Chr3g0466591 Rosa chinensis
RcHm_v2.0_Chr5g0064421 Rosa chinensis
Rhsim04G0156800 Rhododendron simsii
Rhsim04G0157000 Rhododendron simsii
Rhsim13G0082900 Rhododendron simsii
Sabra09G0021700 Salix brachista
Sabra16G0101300 Salix brachista
Sabra16G0144400 Salix brachista
SalBow3G0449 Salvia bowleyana
SalBow4G1848 Salvia bowleyana
Sc01g0004350 Simmondsia chinensis
Sc12g0001520 Simmondsia chinensis
Sed0003539 Sechium edule
Sed0017939 Sechium edule
SGA_v2.0_scaffold203G41512 Striga asiatica
SGA_v2.0_scaffold35G14232 Striga asiatica
SMO172G0152 Selaginella moellendorffii
SMO201G0184 Selaginella moellendorffii
Solyc06g076130.3 Solanum lycopersicum
Solyc09g010790.2 Solanum lycopersicum
Solyc10g084750.1 Solanum lycopersicum
Sopen06g032530 Solanum pennellii
Sopen09g005510 Solanum pennellii
Sopen10g034200 Solanum pennellii
Sp1g06340 Schrenkiella parvula
Sp6g40090 Schrenkiella parvula
TAR362G0019 Trochodendron aralioides
TAR362G0487 Trochodendron aralioides
TAR362G0515 Trochodendron aralioides
TAR362G0676 Trochodendron aralioides
TAR362G1002 Trochodendron aralioides
TAR633G1102 Trochodendron aralioides
TAR636G0061 Trochodendron aralioides
TAR636G0721 Trochodendron aralioides
TAR636G1413 Trochodendron aralioides
TAR636G1669 Trochodendron aralioides
THA.LOC104800658 Tarenaya hassleriana
THA.LOC104816274 Tarenaya hassleriana
Thecc.05G040000 Theobroma cacao
Thecc.09G300700 Theobroma cacao
Thecc.09G322100 Theobroma cacao
Thhalv10007259m.g Eutrema salsugineum
Thhalv10012673m.g Eutrema salsugineum
Thhalv10015221m.g Eutrema salsugineum
TPR.G27274 Trifolium pratense
TPR.G31257 Trifolium pratense
TPR.G34265 Trifolium pratense
TWI74G1566 Tripterygium wilfordii
TWI79G0006 Tripterygium wilfordii
unitig_0.g700 Utricularia gibba
unitig_899.g15252 Utricularia gibba
unitig_899.g15253 Utricularia gibba
vmacro03074 Vaccinium macrocarpon
vmacro08655 Vaccinium macrocarpon
VMungo0331G1811 Vigna mungo
VMungo0720G0231 Vigna mungo
VMungo1080G0109 Vigna mungo
Zm00001eb029260 Zea mays
Zm00001eb124370 Zea mays
Zm00001eb335890 Zea mays

User provided reference genes

Program Settings