Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42390 Brassica napus
A06p15070 Brassica napus
A06p29230 Brassica napus
Aa31LG11G1110 Aethionema arabicum
Aa31LG7G3620 Aethionema arabicum
Aa31sc17G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5522 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2581 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis
Actinidia04916 Actinidia chinensis
Actinidia19055 Actinidia chinensis
Actinidia34980 Actinidia chinensis
Actinidia37649 Actinidia chinensis
Ah.02g112510 Amaranthus hybridus
AL1G31390 Arabidopsis lyrata
AL8G39420 Arabidopsis lyrata
Aqoxy3G03288 Aquilegia oxysepala
Aqoxy3G03293 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0II3I9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.77YH77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea
AT1G18850 Arabidopsis thaliana
AT5G62530 Arabidopsis thaliana
ATR1120G016 Amborella trichopoda
ATR1120G185 Amborella trichopoda
Atru.BG.192.p Acer truncatum
Atru.chr9.2306 Acer truncatum
AUR62008369 Chenopodium quinoa
AUR62021730 Chenopodium quinoa
AUR62038455 Chenopodium quinoa
AUR62042153 Chenopodium quinoa
BcaB02g09655 Brassica carinata
BcaB07g29846 Brassica carinata
BcaB07g31903 Brassica carinata
BcaB07g32205 Brassica carinata
BcaC01g02484 Brassica carinata
BcaC03g18158 Brassica carinata
BcaC03g18163 Brassica carinata
BcaC05g25787 Brassica carinata
BolC2t12285H Brassica oleracea
BolC2t12286H Brassica oleracea
BolC3t18684H Brassica oleracea
BolC5t30427H Brassica oleracea
BraA02t09170Z Brassica rapa
BraA06t24622Z Brassica rapa
BraA06t25879Z Brassica rapa
C02p62280 Brassica napus
C02p62290 Brassica napus
C03p64300 Brassica napus
C05p17270 Brassica napus
CAN.G628.36 Capsicum annuum
CAN.G628.37 Capsicum annuum
CANSAT01G1674 Cannabis sativa
CANSAT78G1429 Cannabis sativa
CARHR019500 Cardamine hirsuta
CARHR276310 Cardamine hirsuta
Carub.0001s1850 Capsella rubella
Carub.0008s2320 Capsella rubella
Ca_16191_v3 Cicer arietinum L.
Ca_21843_v3 Cicer arietinum L.
CBR_g26261 Chara braunii
Cc04_g15410 Coffea canephora
Cc04_g15430 Coffea canephora
CDE05G2125 Ceratophyllum demersum
CDE07G0237 Ceratophyllum demersum
Cfa018980 Carpinus fangiana
Cfa018981 Carpinus fangiana
Cfa021306 Carpinus fangiana
Ciclev10019562m.g Citrus clementina
Ciclev10020527m.g Citrus clementina
Ciclev10033409m.g Citrus clementina
CiPaw.11G039400 Carya illinoinensis
CiPaw.11G039500 Carya illinoinensis
ClCG01G014440 Citrullus lanatus
ClCG01G016490 Citrullus lanatus
COL.COLO4_05456 Corchorus olitorius
COL.COLO4_31086 Corchorus olitorius
Cpa.g.sc17.218 Carica papaya
Cpa.g.sc17.219 Carica papaya
Cre03.g163700 Chlamydomonas reinhardtii
Cre12.g520350 Chlamydomonas reinhardtii
CsaV3_1G007880 Cucumis sativus L.
CsaV3_6G042770 Cucumis sativus L.
CSS0027489 Camellia sinensis var. sinensis
CSS0041593 Camellia sinensis var. sinensis
CSS0049848 Camellia sinensis var. sinensis
DCAR_001117 Daucus carota
DCAR_001954 Daucus carota
DCAR_001955 Daucus carota
Dinv02432 Davidia involucrata
Dinv02434 Davidia involucrata
Dinv09821 Davidia involucrata
Dinv19925 Davidia involucrata
Dinv38674 Davidia involucrata
Duzib068G0930 Durio zibethinus
Duzib205G0461 Durio zibethinus
Duzib205G1248 Durio zibethinus
ECA232G1281 Erigeron canadensis
ECA236G0190 Erigeron canadensis
EL10Ac5g10953 Beta vulgaris
EL10As5g23568 Beta vulgaris
Eucgr.A00822 Eucalyptus grandis
Eucgr.B00436 Eucalyptus grandis
FAN04G0870 Fragaria x ananassa
FAN04G1481 Fragaria x ananassa
FAN08G0998 Fragaria x ananassa
FAN13G2486 Fragaria x ananassa
FAN13G2799 Fragaria x ananassa
FAN18G2091 Fragaria x ananassa
FAN18G3736 Fragaria x ananassa
FvH4_5g15350 Fragaria vesca
FvH4_5g15370 Fragaria vesca
Glyma.05G029100 Glycine max
Glyma.05G029200 Glycine max
Glyma.05G029300 Glycine max
Glyma.17G097600 Glycine max
Glyma.17G097651 Glycine max
Glyma.17G097700 Glycine max
Glyma.17G097800 Glycine max
Gohir.A03G065300 Gossypium hirsutum
Gohir.A11G029531 Gossypium hirsutum
Gohir.D03G091600 Gossypium hirsutum
Gohir.D11G032900 Gossypium hirsutum
Gorai.003G095000 Gossypium raimondii
Gorai.007G035700 Gossypium raimondii
GSVIVG01008047001 Vitis vinifera
GSVIVG01008049001 Vitis vinifera
HanXRQChr02g0045291 Helianthus annuus
HanXRQChr05g0158781 Helianthus annuus
HanXRQChr06g0178031 Helianthus annuus
HanXRQChr09g0271081 Helianthus annuus
HanXRQChr13g0402801 Helianthus annuus
Haze_07366 Corylus avellana
Haze_07368 Corylus avellana
Hma1.2p1_0002F.1_g003110 Hydrangea macrophylla
Hma1.2p1_0002F.1_g003120 Hydrangea macrophylla
Hma1.2p1_0446F.1_g154690 Hydrangea macrophylla
HPP92_004873 Vanilla planifolia
HPP92_007639 Vanilla planifolia
Hund09366 Selenicereus undatus
Lalb_Chr07g0177901 Lupinus albus
Lalb_Chr12g0196751 Lupinus albus
Lalb_Chr13g0303401 Lupinus albus
Lj4g0008726 Lotus japonicus
Lj4g0024401 Lotus japonicus
Lj5P114T15 Lonicera japonica
Lj7P436T44 Lonicera japonica
Lj9C460G15 Lonicera japonica
Lsat_1_v5_gn_1_10961 Lactuca sativa
Lsat_1_v5_gn_1_10981 Lactuca sativa
Lsat_1_v5_gn_4_107620 Lactuca sativa
Manes.14G075600 Manihot esculenta
Manes.14G075700 Manihot esculenta
Mapoly0028s0021 Marchantia polymorpha
Mapoly0053s0041 Marchantia polymorpha
MBI03_g18947_MAGBIO Magnolia biondii
MBI03_g28522_MAGBIO Magnolia biondii
MBI04_g05752_MAGBIO Magnolia biondii
MBI06_g22348_MAGBIO Magnolia biondii
MBI11_g21312_MAGBIO Magnolia biondii
MD06G1189000 Malus domestica
MD09G1225500 Malus domestica
MD14G1195800 Malus domestica
MD14G1196000 Malus domestica
Medtr1g051515 Medicago truncatula
Medtr3g078030 Medicago truncatula
Medtr4g107940 Medicago truncatula
MELO3C002203.2 Cucumis melo
MELO3C007518.2 Cucumis melo
Migut.I00134 Erythranthe guttata
Migut.M00130 Erythranthe guttata
MSTRG.11396 Avicennia marina
MSTRG.4344 Avicennia marina
Nitab4.5_0000269g0140 Nicotiana tabacum
Nitab4.5_0000269g0160 Nicotiana tabacum
Nitab4.5_0007394g0010 Nicotiana tabacum
Nitab4.5_0007394g0020 Nicotiana tabacum
Nn3g16999 Nelumbo nucifera
Nn5g27262 Nelumbo nucifera
Nn5g27265 Nelumbo nucifera
Oeu022629.1 Olea europaea
Os01g0112100 Oryza sativa ssp. japonica
Os05g0536400 Oryza sativa ssp. japonica
Peaxi162Scf00013g00007 Petunia axillaris
Peaxi162Scf00013g00037 Petunia axillaris
PGR083G0441 Punica granatum
PGR083G1477 Punica granatum
PGSC0003DMG400033071 Solanum tuberosum
PGSC0003DMG400033072 Solanum tuberosum
Phvul.003G192100 Phaseolus vulgaris
Phvul.003G192200 Phaseolus vulgaris
Potri.015G064200 Populus trichocarpa
Potri.015G064300 Populus trichocarpa
Pp3c1_3820 Physcomitrium patens
Pp3c1_3850 Physcomitrium patens
Pp3c5_4940 Physcomitrium patens
Prupe.5G187600 Prunus persica
Prupe.5G187700 Prunus persica
Psat4g053760 Pisum sativum
Psat5g114360 Pisum sativum
PSO017G0663 Papaver somniferum
PSO063G6525 Papaver somniferum
PSO210G5644 Papaver somniferum
PSO478G0883 Papaver somniferum
PSO591G0510 Papaver somniferum
PSO832G2768 Papaver somniferum
QL10p005074 Quercus lobata
QL10p015753 Quercus lobata
QL10p015763 Quercus lobata
RcHm_v2.0_Chr7g0180701 Rosa chinensis
RcHm_v2.0_Chr7g0180721 Rosa chinensis
Rhsim08G0159000 Rhododendron simsii
Rhsim09G0050800 Rhododendron simsii
Rhsim12G0158400 Rhododendron simsii
Rhsim12G0158700 Rhododendron simsii
Sabra12G0030300 Salix brachista
Sabra15G0090000 Salix brachista
Sabra15G0090100 Salix brachista
SalBow5G0936 Salvia bowleyana
SalBow5G1952 Salvia bowleyana
SalBow5G4081 Salvia bowleyana
Sc10g0009970 Simmondsia chinensis
Sc12g0006220 Simmondsia chinensis
Sed0014360 Sechium edule
Sed0026511 Sechium edule
Sed0027525 Sechium edule
SEGI_08975 Sequoiadendron giganteum
SEGI_18201 Sequoiadendron giganteum
SEGI_23766 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32584 Striga asiatica
SGA_v2.0_scaffold25G10908 Striga asiatica
SGA_v2.0_scaffold56G20046 Striga asiatica
SGA_v2.0_scaffold6G03145 Striga asiatica
SHI03355 Sapria himalayana
SHI03938 Sapria himalayana
SMO118G0249 Selaginella moellendorffii
SMO367G0630 Selaginella moellendorffii
Solyc06g071000.3 Solanum lycopersicum
Solyc06g071010.4 Solanum lycopersicum
Sopen06g027300 Solanum pennellii
Sopen06g027310 Solanum pennellii
Sp1g16830 Schrenkiella parvula
Sp2g25700 Schrenkiella parvula
TAR374G0022 Trochodendron aralioides
TAR622G0396 Trochodendron aralioides
TAR622G0915 Trochodendron aralioides
THA.LOC104808328 Tarenaya hassleriana
THA.LOC104821429 Tarenaya hassleriana
Thecc.03G080700 Theobroma cacao
Thecc.03G080800 Theobroma cacao
Thhalv10003935m.g Eutrema salsugineum
Thhalv10007868m.g Eutrema salsugineum
TPR.G1695 Trifolium pratense
TPR.G28161 Trifolium pratense
TPR.G38417 Trifolium pratense
TPR.G5442 Trifolium pratense
TWI15G0064 Tripterygium wilfordii
TWI38G0829 Tripterygium wilfordii
TWI39G0444 Tripterygium wilfordii
unitig_0.g2534 Utricularia gibba
unitig_52.g17495 Utricularia gibba
vmacro16565 Vaccinium macrocarpon
vmacro17514 Vaccinium macrocarpon
VMungo1215G2696 Vigna mungo
VMungo1215G3404 Vigna mungo
Zm00001eb126250 Zea mays
Zm00001eb294160 Zea mays
Zm00001eb334590 Zea mays

User provided reference genes

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