Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11730 Brassica napus
A03p52010 Brassica napus
A03p52180 Brassica napus
Aa31LG5G13790 Aethionema arabicum
Aa31LG5G1790 Aethionema arabicum
Aa31LG6G2330 Aethionema arabicum
Aa31LG9G8160 Aethionema arabicum
Actinidia03257 Actinidia chinensis
Actinidia03259 Actinidia chinensis
Actinidia22393 Actinidia chinensis
Actinidia31354 Actinidia chinensis
Ah.06g195330 Amaranthus hybridus
Ah.14g079550 Amaranthus hybridus
Ah.14g086000 Amaranthus hybridus
AL3G12940 Arabidopsis lyrata
AL7G34220 Arabidopsis lyrata
Aqoxy1G01480 Aquilegia oxysepala
Aqoxy2G04087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05QLFH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.16A6WD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31FE81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31N1MT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57G84F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8BFK0M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FC0PQ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8NWVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K724YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9MPK0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2XHCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQ3K6M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3WNCL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YX69JE Arachis hypogaea
AT3G03310 Arabidopsis thaliana
AT4G19860 Arabidopsis thaliana
ATR0743G070 Amborella trichopoda
ATR0763G244 Amborella trichopoda
Atru.chr10.502 Acer truncatum
Atru.chr12.1678 Acer truncatum
AUR62000281 Chenopodium quinoa
AUR62006629 Chenopodium quinoa
AUR62027349 Chenopodium quinoa
AUR62038587 Chenopodium quinoa
AUR62038588 Chenopodium quinoa
BcaC05g30304 Brassica carinata
BcaC06g30623 Brassica carinata
BcaC07g40199 Brassica carinata
BcaC09g51362 Brassica carinata
BcaNung01747 Brassica carinata
BcaNung02546 Brassica carinata
BolC1t01359H Brassica oleracea
BolC5t35011H Brassica oleracea
BolC7t45559H Brassica oleracea
BraA01t01115Z Brassica rapa
BraA03t14113Z Brassica rapa
BraA03t14288Z Brassica rapa
C01p13910 Brassica napus
C07p50570 Brassica napus
CAN.G149.53 Capsicum annuum
CAN.G321.24 Capsicum annuum
CANSAT35G1934 Cannabis sativa
CANSAT54G0338 Cannabis sativa
CARHR077350 Cardamine hirsuta
CARHR226640 Cardamine hirsuta
Carub.0003s0248 Capsella rubella
Carub.0007s2135 Capsella rubella
Ca_08008_v3 Cicer arietinum L.
Ca_18767_v3 Cicer arietinum L.
CBR_g34450 Chara braunii
CBR_g34454 Chara braunii
Cc09_g04010 Coffea canephora
Cc09_g06170 Coffea canephora
CDE05G2432 Ceratophyllum demersum
CDE09G0761 Ceratophyllum demersum
Cfa000718 Carpinus fangiana
Cfa006232 Carpinus fangiana
Ciclev10011705m.g Citrus clementina
Ciclev10013161m.g Citrus clementina
Ciclev10014844m.g Citrus clementina
CiPaw.07G083300 Carya illinoinensis
CiPaw.09G078100 Carya illinoinensis
ClCG01G009420 Citrullus lanatus
ClCG11G009130 Citrullus lanatus
COL.COLO4_25020 Corchorus olitorius
COL.COLO4_30986 Corchorus olitorius
COL.COLO4_32063 Corchorus olitorius
Cpa.g.sc135.16 Carica papaya
CsaV3_1G046370 Cucumis sativus L.
CsaV3_2G010330 Cucumis sativus L.
CSS0027418 Camellia sinensis var. sinensis
CSS0030732 Camellia sinensis var. sinensis
DCAR_001322 Daucus carota
DCAR_017790 Daucus carota
DCAR_023897 Daucus carota
DCAR_023898 Daucus carota
Dinv13252 Davidia involucrata
Dinv21360 Davidia involucrata
Duzib106G0244 Durio zibethinus
Duzib192G0239 Durio zibethinus
Duzib235G1346 Durio zibethinus
ECA232G4524 Erigeron canadensis
ECA233G2688 Erigeron canadensis
EL10Ac4g10013 Beta vulgaris
EL10Ac8g19515 Beta vulgaris
Eucgr.B01436 Eucalyptus grandis
Eucgr.E01878 Eucalyptus grandis
Eucgr.K00007 Eucalyptus grandis
FAN02G1567 Fragaria x ananassa
FAN09G1532 Fragaria x ananassa
FAN09G4410 Fragaria x ananassa
FAN14G0048 Fragaria x ananassa
FAN16G3083 Fragaria x ananassa
FAN21G0714 Fragaria x ananassa
FAN25G2866 Fragaria x ananassa
FvH4_3g12200 Fragaria vesca
FvH4_6g00170 Fragaria vesca
Glyma.07G221800 Glycine max
Glyma.18G244500 Glycine max
Glyma.20G020800 Glycine max
Gohir.A06G195900 Gossypium hirsutum
Gohir.A08G227100 Gossypium hirsutum
Gohir.A10G044900 Gossypium hirsutum
Gohir.D02G115100 Gossypium hirsutum
Gohir.D06G203400 Gossypium hirsutum
Gohir.D08G098466 Gossypium hirsutum
Gohir.D08G247500 Gossypium hirsutum
Gohir.D10G046200 Gossypium hirsutum
Gorai.004G264000 Gossypium raimondii
Gorai.010G237300 Gossypium raimondii
Gorai.011G049000 Gossypium raimondii
Gorai.011G158600 Gossypium raimondii
GSVIVG01012079001 Vitis vinifera
GSVIVG01019050001 Vitis vinifera
HanXRQChr04g0116151 Helianthus annuus
HanXRQChr08g0226181 Helianthus annuus
HanXRQChr09g0258261 Helianthus annuus
HanXRQChr15g0488131 Helianthus annuus
Haze_04600 Corylus avellana
Haze_06033 Corylus avellana
Hma1.2p1_0831F.1_g225280 Hydrangea macrophylla
HPP92_002668 Vanilla planifolia
HPP92_002724 Vanilla planifolia
HPP92_013206 Vanilla planifolia
HPP92_027937 Vanilla planifolia
Hund07370 Selenicereus undatus
Hund17654 Selenicereus undatus
Lalb_Chr03g0038081 Lupinus albus
Lalb_Chr16g0385271 Lupinus albus
Lj1C1144G8 Lonicera japonica
Lj1g0014123 Lotus japonicus
Lj2C352T14 Lonicera japonica
Lj4g0014554 Lotus japonicus
Lj8A197T40 Lonicera japonica
Lsat_1_v5_gn_8_117661 Lactuca sativa
Lsat_1_v5_gn_8_2381 Lactuca sativa
Lsat_1_v5_gn_8_2401 Lactuca sativa
Lsat_1_v5_gn_8_2441 Lactuca sativa
Manes.03G069300 Manihot esculenta
Manes.13G001900 Manihot esculenta
Mapoly0131s0029 Marchantia polymorpha
MBI08_g18906_MAGBIO Magnolia biondii
MBI18_g12211_MAGBIO Magnolia biondii
MD04G1247600 Malus domestica
MD05G1252800 Malus domestica
MD10G1233900 Malus domestica
MD12G1262800 Malus domestica
Medtr0875s0010 Medicago truncatula
Medtr4g083980 Medicago truncatula
Medtr7g080450 Medicago truncatula
MELO3C008598.2 Cucumis melo
MELO3C021759.2 Cucumis melo
Migut.E00891 Erythranthe guttata
Migut.E01639 Erythranthe guttata
Migut.F01851 Erythranthe guttata
Migut.F02099 Erythranthe guttata
Migut.M01976 Erythranthe guttata
MSTRG.16343 Avicennia marina
MSTRG.27408 Avicennia marina
MSTRG.7586 Avicennia marina
MSTRG.8198 Avicennia marina
Nitab4.5_0001003g0010 Nicotiana tabacum
Nitab4.5_0001288g0020 Nicotiana tabacum
Nitab4.5_0003303g0020 Nicotiana tabacum
Nitab4.5_0006561g0030 Nicotiana tabacum
Nitab4.5_0008482g0030 Nicotiana tabacum
Nn7g38135 Nelumbo nucifera
Nn7g38138 Nelumbo nucifera
Oeu001210.1 Olea europaea
Oeu034697.1 Olea europaea
Oeu052671.1 Olea europaea
Oeu060349.1 Olea europaea
Os04g0615100 Oryza sativa ssp. japonica
Os09g0513100 Oryza sativa ssp. japonica
Peaxi162Scf00149g00722 Petunia axillaris
Peaxi162Scf00296g00910 Petunia axillaris
PGR042G2594 Punica granatum
PGR119G0566 Punica granatum
PGSC0003DMG400010352 Solanum tuberosum
PGSC0003DMG400016253 Solanum tuberosum
Phvul.002G098800 Phaseolus vulgaris
Phvul.008G052100 Phaseolus vulgaris
Potri.008G076300 Populus trichocarpa
Potri.012G121596 Populus trichocarpa
Potri.015G121000 Populus trichocarpa
Pp3c19_18650 Physcomitrium patens
Pp3c21_17660 Physcomitrium patens
Pp3c22_13120 Physcomitrium patens
Pp3c5_28340 Physcomitrium patens
Prupe.4G111100 Prunus persica
Prupe.6G364000 Prunus persica
Psat3g137960 Pisum sativum
Psat5g267760 Pisum sativum
Psat7g130640 Pisum sativum
Psat7g130720 Pisum sativum
Psat7g130760 Pisum sativum
Psat7g130880 Pisum sativum
PSO017G3824 Papaver somniferum
PSO541G2869 Papaver somniferum
PSO675G0931 Papaver somniferum
PSO675G2482 Papaver somniferum
PSO675G4121 Papaver somniferum
QL01p047893 Quercus lobata
QL11p017881 Quercus lobata
RcHm_v2.0_Chr2g0113811 Rosa chinensis
RcHm_v2.0_Chr3g0447541 Rosa chinensis
RcHm_v2.0_Chr5g0020001 Rosa chinensis
Rhsim05G0165300 Rhododendron simsii
Rhsim13G0131800 Rhododendron simsii
Rhsim13G0131900 Rhododendron simsii
Sabra08G0056700 Salix brachista
Sabra15G0137500 Salix brachista
SalBow1G8055 Salvia bowleyana
SalBow3G4030 Salvia bowleyana
SalBow3G4128 Salvia bowleyana
SalBow7G0928 Salvia bowleyana
Sc09g0001370 Simmondsia chinensis
Sc24g0002630 Simmondsia chinensis
Sed0014102 Sechium edule
Sed0014126 Sechium edule
SEGI_08567 Sequoiadendron giganteum
SEGI_29749 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33202 Striga asiatica
SGA_v2.0_scaffold341G49376 Striga asiatica
SGA_v2.0_scaffold71G24019 Striga asiatica
SMO196G0246 Selaginella moellendorffii
SMO367G0746 Selaginella moellendorffii
Solyc02g068920.3 Solanum lycopersicum
Solyc11g008550.3 Solanum lycopersicum
Sopen02g018020 Solanum pennellii
Sopen11g004340 Solanum pennellii
Sp3g02340 Schrenkiella parvula
Sp7g18360 Schrenkiella parvula
TAR369G1051 Trochodendron aralioides
TAR627G0427 Trochodendron aralioides
TAR633G2364 Trochodendron aralioides
THA.LOC104811523 Tarenaya hassleriana
THA.LOC104820844 Tarenaya hassleriana
Thecc.05G187600 Theobroma cacao
Thecc.06G141700 Theobroma cacao
Thhalv10020730m.g Eutrema salsugineum
Thhalv10024879m.g Eutrema salsugineum
TPR.G16811 Trifolium pratense
TPR.G20991 Trifolium pratense
TPR.G37489 Trifolium pratense
TWI36G1318 Tripterygium wilfordii
TWI38G1296 Tripterygium wilfordii
unitig_61.g26076 Utricularia gibba
vmacro03515 Vaccinium macrocarpon
vmacro19581 Vaccinium macrocarpon
VMungo0251G2180 Vigna mungo
VMungo1383G2506 Vigna mungo
Zm00001eb070790 Zea mays
Zm00001eb318230 Zea mays

User provided reference genes

Program Settings