Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02630 Brassica napus
A02p04760 Brassica napus
A03p08680 Brassica napus
A03p12270 Brassica napus
A10p15880 Brassica napus
A10p21350 Brassica napus
Aa31LG11G11450 Aethionema arabicum
Aa31LG11G170 Aethionema arabicum
Actinidia17304 Actinidia chinensis
Actinidia23847 Actinidia chinensis
Actinidia34487 Actinidia chinensis
Actinidia38614 Actinidia chinensis
Ah.04g153170 Amaranthus hybridus
AL6G25370 Arabidopsis lyrata
AL6G29350 Arabidopsis lyrata
AL8G34530 Arabidopsis lyrata
Aqoxy2G00734 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.70V5E3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BJ4LEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLS04B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GK9JFI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1115Z Arachis hypogaea
AT5G14602 Arabidopsis thaliana
AT5G18150 Arabidopsis thaliana
AT5G58375 Arabidopsis thaliana
ATR0737G176 Amborella trichopoda
Atru.chr1.2537 Acer truncatum
Atru.chr2.1382 Acer truncatum
Atru.chr2.1386 Acer truncatum
AUR62032050 Chenopodium quinoa
AUR62032697 Chenopodium quinoa
AUR62036222 Chenopodium quinoa
BcaB01g04526 Brassica carinata
BcaB01g04528 Brassica carinata
BcaB01g05178 Brassica carinata
BcaB01g06400 Brassica carinata
BcaB05g23301 Brassica carinata
BcaB08g36175 Brassica carinata
BcaB08g36701 Brassica carinata
BcaC03g13463 Brassica carinata
BcaC03g13464 Brassica carinata
BcaC03g13465 Brassica carinata
BcaC03g13467 Brassica carinata
BcaC03g13469 Brassica carinata
BcaC03g13580 Brassica carinata
BcaC03g13581 Brassica carinata
BcaC04g19872 Brassica carinata
BcaNung03110 Brassica carinata
BcaNung03112 Brassica carinata
BolC2t06644H Brassica oleracea
BolC2t06645H Brassica oleracea
BolC2t06881H Brassica oleracea
BolC3t13498H Brassica oleracea
BolC3t13884H Brassica oleracea
BolC9t57882H Brassica oleracea
BolC9t58726H Brassica oleracea
BraA02t05231Z Brassica rapa
BraA02t05232Z Brassica rapa
BraA02t05435Z Brassica rapa
BraA03t10191Z Brassica rapa
BraA03t10538Z Brassica rapa
BraA10t43637Z Brassica rapa
BraA10t44198Z Brassica rapa
C02p07110 Brassica napus
C02p09720 Brassica napus
C03p10120 Brassica napus
C03p14410 Brassica napus
C09p50250 Brassica napus
C09p58820 Brassica napus
CAN.G1001.29 Capsicum annuum
CAN.G1359.2 Capsicum annuum
CANSAT54G2954 Cannabis sativa
CANSAT78G1855 Cannabis sativa
CARHR194910 Cardamine hirsuta
CARHR198710 Cardamine hirsuta
CARHR272210 Cardamine hirsuta
Carub.0006s1278 Capsella rubella
Carub.0006s1644 Capsella rubella
Carub.0008s1896 Capsella rubella
Ca_07568_v3 Cicer arietinum L.
Ca_08265_v3 Cicer arietinum L.
Ca_15030_v3 Cicer arietinum L.
Cc01_g15160 Coffea canephora
Cc06_g22980 Coffea canephora
CDE02G2185 Ceratophyllum demersum
CDE02G4642 Ceratophyllum demersum
CDE04G3004 Ceratophyllum demersum
CDE07G1433 Ceratophyllum demersum
Cfa011808 Carpinus fangiana
Cfa016443 Carpinus fangiana
Ciclev10002982m.g Citrus clementina
Ciclev10022769m.g Citrus clementina
CiPaw.10G001000 Carya illinoinensis
CiPaw.13G065700 Carya illinoinensis
CiPaw.14G052100 Carya illinoinensis
ClCG03G000250 Citrullus lanatus
ClCG04G005330 Citrullus lanatus
ClCG06G014220 Citrullus lanatus
COL.COLO4_13595 Corchorus olitorius
Cpa.g.sc51.116 Carica papaya
CsaV3_1G036660 Cucumis sativus L.
CsaV3_4G013260 Cucumis sativus L.
CSS0002166 Camellia sinensis var. sinensis
CSS0015391 Camellia sinensis var. sinensis
CSS0028749 Camellia sinensis var. sinensis
DCAR_013687 Daucus carota
DCAR_017052 Daucus carota
DCAR_019877 Daucus carota
Dinv12265 Davidia involucrata
Dinv28717 Davidia involucrata
Duzib128G1093 Durio zibethinus
Duzib168G0931 Durio zibethinus
Duzib177G0910 Durio zibethinus
Duzib177G1131 Durio zibethinus
ECA233G6097 Erigeron canadensis
ECA248G0635 Erigeron canadensis
EL10Ac3g06824 Beta vulgaris
EL10Ac7g15859 Beta vulgaris
Eucgr.A02098 Eucalyptus grandis
FAN11G2828 Fragaria x ananassa
FAN14G4634 Fragaria x ananassa
FAN16G0018 Fragaria x ananassa
FAN21G0562 Fragaria x ananassa
FAN25G0299 Fragaria x ananassa
FvH4_3g40240 Fragaria vesca
Glyma.02G072300 Glycine max
Glyma.02G234900 Glycine max
Glyma.11G161000 Glycine max
Glyma.14G202800 Glycine max
Glyma.16G041100 Glycine max
Glyma.16G153500 Glycine max
Glyma.18G054800 Glycine max
Glyma.19G112000 Glycine max
Gohir.A03G023700 Gossypium hirsutum
Gohir.A11G259700 Gossypium hirsutum
Gohir.A11G296400 Gossypium hirsutum
Gohir.A13G171950 Gossypium hirsutum
Gohir.D03G144900 Gossypium hirsutum
Gohir.D11G269800 Gossypium hirsutum
Gohir.D11G310500 Gossypium hirsutum
Gohir.D13G177800 Gossypium hirsutum
Gorai.003G152100 Gossypium raimondii
Gorai.007G289900 Gossypium raimondii
Gorai.007G343300 Gossypium raimondii
Gorai.013G203100 Gossypium raimondii
GSVIVG01001063001 Vitis vinifera
GSVIVG01024585001 Vitis vinifera
GSVIVG01033404001 Vitis vinifera
HanXRQChr02g0054231 Helianthus annuus
HanXRQChr13g0397721 Helianthus annuus
HanXRQChr14g0438171 Helianthus annuus
Haze_19420 Corylus avellana
Haze_19449 Corylus avellana
Haze_24448 Corylus avellana
Hma1.2p1_0119F.1_g056820 Hydrangea macrophylla
Hma1.2p1_1637F.1_g294900 Hydrangea macrophylla
Hma1.2p1_2270F.1_g318500 Hydrangea macrophylla
Hma1.2p1_3399F.1_g335800 Hydrangea macrophylla
HPP92_015429 Vanilla planifolia
Hund19234 Selenicereus undatus
Lalb_Chr02g0157121 Lupinus albus
Lalb_Chr06g0173991 Lupinus albus
Lalb_Chr15g0085951 Lupinus albus
Lalb_Chr18g0054341 Lupinus albus
Lj1g0009743 Lotus japonicus
Lj3g0011171 Lotus japonicus
Lj3g0024798 Lotus japonicus
Lj6g0011789 Lotus japonicus
LjContig00141g0020471 Lotus japonicus
Lsat_1_v5_gn_5_175200 Lactuca sativa
Lsat_1_v5_gn_6_37000 Lactuca sativa
Manes.08G144400 Manihot esculenta
Manes.09G141300 Manihot esculenta
Manes.18G137400 Manihot esculenta
Mapoly0027s0077 Marchantia polymorpha
MBI04_g38345_MAGBIO Magnolia biondii
MBI15_g31429_MAGBIO Magnolia biondii
MD03G1054900 Malus domestica
MD11G1056300 Malus domestica
MD12G1003700 Malus domestica
MD12G1185100 Malus domestica
MD14G1002600 Malus domestica
Medtr0398s0030 Medicago truncatula
Medtr3g466420 Medicago truncatula
Medtr5g075070 Medicago truncatula
Medtr5g098200 Medicago truncatula
Medtr5g098280 Medicago truncatula
Medtr6g029390 Medicago truncatula
Medtr7g085610 Medicago truncatula
MELO3C008804.2 Cucumis melo
MELO3C017370.2 Cucumis melo
Migut.D00831 Erythranthe guttata
Migut.J01886 Erythranthe guttata
Nitab4.5_0000002g0140 Nicotiana tabacum
Nitab4.5_0000394g0010 Nicotiana tabacum
Nitab4.5_0000626g0060 Nicotiana tabacum
Nitab4.5_0001234g0020 Nicotiana tabacum
Nn2g10356 Nelumbo nucifera
Nn2g15866 Nelumbo nucifera
Nn5g26900 Nelumbo nucifera
Oeu011368.1 Olea europaea
Oeu024504.1 Olea europaea
Oeu027171.1 Olea europaea
Oeu027176.1 Olea europaea
Os11g0113300 Oryza sativa ssp. japonica
Os12g0112800 Oryza sativa ssp. japonica
Peaxi162Scf00463g00001 Petunia axillaris
PGR042G1972 Punica granatum
PGSC0003DMG400003369 Solanum tuberosum
Phvul.001G110700 Phaseolus vulgaris
Phvul.004G080100 Phaseolus vulgaris
Phvul.006G076400 Phaseolus vulgaris
Potri.013G058200 Populus trichocarpa
Potri.013G155800 Populus trichocarpa
Potri.019G035000 Populus trichocarpa
Potri.019G127900 Populus trichocarpa
Pp3c23_14750 Physcomitrium patens
Pp3c8_19160 Physcomitrium patens
Prupe.6G043500 Prunus persica
Prupe.6G290500 Prunus persica
Prupe.7G004200 Prunus persica
Psat0s1971g0080 Pisum sativum
Psat1g092160 Pisum sativum
Psat2g051720 Pisum sativum
Psat5g150400 Pisum sativum
PSO384G4494 Papaver somniferum
QL01p025218 Quercus lobata
QL07p019482 Quercus lobata
RcHm_v2.0_Chr3g0460941 Rosa chinensis
RcHm_v2.0_Chr5g0025021 Rosa chinensis
RcHm_v2.0_Chr5g0072461 Rosa chinensis
Rhsim04G0087700 Rhododendron simsii
Sabra13G0051700 Salix brachista
Sabra13G0125700 Salix brachista
Sabra19G0042700 Salix brachista
Sabra19G0045000 Salix brachista
Sabra19G0125600 Salix brachista
Sabra19G0129700 Salix brachista
Sc06g0000380 Simmondsia chinensis
Sed0020218 Sechium edule
Sed0026925 Sechium edule
SEGI_01199 Sequoiadendron giganteum
SEGI_06891 Sequoiadendron giganteum
SEGI_12704 Sequoiadendron giganteum
SGA_v2.0_scaffold394G50716 Striga asiatica
Solyc06g075190.1 Solanum lycopersicum
Sopen06g031600 Solanum pennellii
Sp6g20040 Schrenkiella parvula
Sp6g26160 Schrenkiella parvula
TAR623G1300 Trochodendron aralioides
TAR633G0180 Trochodendron aralioides
TAR636G1900 Trochodendron aralioides
TAR636G3063 Trochodendron aralioides
THA.LOC104799381 Tarenaya hassleriana
THA.LOC104820773 Tarenaya hassleriana
THA.LOC104827276 Tarenaya hassleriana
Thecc.05G294700 Theobroma cacao
Thecc.09G361700 Theobroma cacao
Thhalv10015157m.g Eutrema salsugineum
Thhalv10015170m.g Eutrema salsugineum
Thhalv10015306m.g Eutrema salsugineum
TPR.G24952 Trifolium pratense
TPR.G25744 Trifolium pratense
TPR.G25748 Trifolium pratense
TPR.G5914 Trifolium pratense
TPR.G9137 Trifolium pratense
TWI32G0446 Tripterygium wilfordii
TWI79G1586 Tripterygium wilfordii
unitig_0.g2145 Utricularia gibba
unitig_747.g21449 Utricularia gibba
vmacro09139 Vaccinium macrocarpon
vmacro14633 Vaccinium macrocarpon
Zm00001eb163950 Zea mays
Zm00001eb406300 Zea mays

User provided reference genes

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