Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25680 Brassica napus
A07p39570 Brassica napus
Aa31LG4G4040 Aethionema arabicum
Aa31LG8G9510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.385__386 Anthoceros agrestis
Actinidia06778 Actinidia chinensis
Actinidia07831 Actinidia chinensis
Actinidia07832 Actinidia chinensis
Ah.01g005230 Amaranthus hybridus
Ah.06g188680 Amaranthus hybridus
Ah.06g188690 Amaranthus hybridus
Ah.13g068120 Amaranthus hybridus
Ah.13g068130 Amaranthus hybridus
Ah.13g068150 Amaranthus hybridus
Ah.13g068180 Amaranthus hybridus
Ah.13g068190 Amaranthus hybridus
AL2G33510 Arabidopsis lyrata
AL3G37420 Arabidopsis lyrata
AL3G37450 Arabidopsis lyrata
AL57U10010 Arabidopsis lyrata
Aqoxy2G03503 Aquilegia oxysepala
Aqoxy4G01360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0PND55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.13GU12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48HMV1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4AH5LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Z7TM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FY6522 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K92JXF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P90V4Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QX7DQR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SV1H5N Arachis hypogaea
AT1G73710 Arabidopsis thaliana
AT3G23020 Arabidopsis thaliana
ATR0665G174 Amborella trichopoda
ATR0693G368 Amborella trichopoda
Atru.chr4.2287 Acer truncatum
Atru.chr6.3047 Acer truncatum
AUR62000543 Chenopodium quinoa
AUR62006894 Chenopodium quinoa
AUR62037373 Chenopodium quinoa
AUR62038945 Chenopodium quinoa
BcaB03g15076 Brassica carinata
BcaB06g26423 Brassica carinata
BcaC01g03400 Brassica carinata
BcaC05g27985 Brassica carinata
BcaC05g27986 Brassica carinata
BcaC08g46792 Brassica carinata
BolC5t32738H Brassica oleracea
BolC5t32740H Brassica oleracea
BolC6t39821H Brassica oleracea
BraA05t21449Z Brassica rapa
BraA07t31506Z Brassica rapa
C05p39930 Brassica napus
C05p39950 Brassica napus
C06p47860 Brassica napus
CAN.G749.33 Capsicum annuum
CAN.G996.9 Capsicum annuum
CANSAT64G1102 Cannabis sativa
CANSAT78G2316 Cannabis sativa
CARHR066780 Cardamine hirsuta
CARHR098950 Cardamine hirsuta
Carub.0002s2046 Capsella rubella
Carub.0003s2318 Capsella rubella
Ca_05774_v3 Cicer arietinum L.
Ca_10409_v3 Cicer arietinum L.
Ca_12209_v3 Cicer arietinum L.
CBR_g22948 Chara braunii
CBR_g45232 Chara braunii
CBR_g48205 Chara braunii
Cc03_g04610 Coffea canephora
Cc05_g06520 Coffea canephora
CDE05G0026 Ceratophyllum demersum
CDE05G0456 Ceratophyllum demersum
CDE05G2893 Ceratophyllum demersum
CDE06G1783 Ceratophyllum demersum
Cfa008402 Carpinus fangiana
Cfa014560 Carpinus fangiana
Ciclev10004292m.g Citrus clementina
Ciclev10017547m.g Citrus clementina
CiPaw.01G192700 Carya illinoinensis
CiPaw.03G171300 Carya illinoinensis
ClCG01G020210 Citrullus lanatus
ClCG08G000450 Citrullus lanatus
COL.COLO4_13706 Corchorus olitorius
Cpa.g.sc34.115 Carica papaya
Cpa.g.sc58.9 Carica papaya
CsaV3_4G030850 Cucumis sativus L.
CsaV3_5G040330 Cucumis sativus L.
CSS0000020 Camellia sinensis var. sinensis
CSS0026566 Camellia sinensis var. sinensis
CSS0032076 Camellia sinensis var. sinensis
CSS0034469 Camellia sinensis var. sinensis
DCAR_005281 Daucus carota
Dinv01391 Davidia involucrata
Dinv05730 Davidia involucrata
Duzib212G0327 Durio zibethinus
Duzib248G0818 Durio zibethinus
ECA246G4149 Erigeron canadensis
EL10Ac4g08414 Beta vulgaris
EL10Ac4g09674 Beta vulgaris
EL10Ac5g11869 Beta vulgaris
EL10Ac9g20676 Beta vulgaris
EL10Ac9g21067 Beta vulgaris
Eucgr.D00099 Eucalyptus grandis
Eucgr.K00941 Eucalyptus grandis
FAN02G3196 Fragaria x ananassa
FAN05G3474 Fragaria x ananassa
FAN09G3013 Fragaria x ananassa
FAN12G1103 Fragaria x ananassa
FAN14G2792 Fragaria x ananassa
FAN17G1196 Fragaria x ananassa
FAN22G0099 Fragaria x ananassa
FvH4_4g02020 Fragaria vesca
FvH4_6g44930 Fragaria vesca
Glyma.08G174800 Glycine max
Glyma.10G001500 Glycine max
Glyma.10G193100 Glycine max
Glyma.20G197300 Glycine max
Gohir.A04G105300 Gossypium hirsutum
Gohir.A09G221700 Gossypium hirsutum
Gohir.D04G145100 Gossypium hirsutum
Gohir.D09G223800 Gossypium hirsutum
Gorai.006G245300 Gossypium raimondii
Gorai.012G131100 Gossypium raimondii
GSVIVG01018090001 Vitis vinifera
HanXRQChr06g0184931 Helianthus annuus
HanXRQChr14g0428761 Helianthus annuus
HanXRQChr15g0480341 Helianthus annuus
Haze_11266 Corylus avellana
Haze_13105 Corylus avellana
HPP92_006127 Vanilla planifolia
HPP92_016532 Vanilla planifolia
HPP92_016533 Vanilla planifolia
Hund08036 Selenicereus undatus
Lalb_Chr01g0020831 Lupinus albus
Lalb_Chr15g0088581 Lupinus albus
Lalb_Chr21g0312681 Lupinus albus
Lj1P569T5 Lonicera japonica
Lj5g0026763 Lotus japonicus
Lj6g0009664 Lotus japonicus
Lj8A304T45 Lonicera japonica
Lj8P116T30 Lonicera japonica
Lj8P116T32 Lonicera japonica
LjContig00141g0004174 Lotus japonicus
Lju1074C3T5 Lonicera japonica
Lsat_1_v5_gn_3_39301 Lactuca sativa
Lsat_1_v5_gn_5_67920 Lactuca sativa
Manes.13G150200 Manihot esculenta
Manes.15G035300 Manihot esculenta
Mapoly0019s0056 Marchantia polymorpha
Mapoly0078s0043 Marchantia polymorpha
MBI02_g29389_MAGBIO Magnolia biondii
MBI11_g15906_MAGBIO Magnolia biondii
MBI11_g15907_MAGBIO Magnolia biondii
MCO01G385 Micromonas commoda
MD09G1091700 Malus domestica
MD13G1203500 Malus domestica
MD16G1205100 Malus domestica
MD17G1081600 Malus domestica
MD17G1081700 Malus domestica
Medtr1g040765 Medicago truncatula
Medtr1g090120 Medicago truncatula
Medtr5g042370 Medicago truncatula
Medtr5g077220 Medicago truncatula
MELO3C014273.2 Cucumis melo
MELO3C033525.2 Cucumis melo
Migut.H01034 Erythranthe guttata
Migut.N00231 Erythranthe guttata
MSTRG.14189 Avicennia marina
MSTRG.24708 Avicennia marina
Nitab4.5_0007585g0010 Nicotiana tabacum
Nitab4.5_0009520g0020 Nicotiana tabacum
Nitab4.5_0027477g0010 Nicotiana tabacum
Nn1g02530 Nelumbo nucifera
Nn2g14806 Nelumbo nucifera
Nn2g14807 Nelumbo nucifera
Oeu043369.1 Olea europaea
Oeu064217.1 Olea europaea
Os03g0162900 Oryza sativa ssp. japonica
Os07g0472100 Oryza sativa ssp. japonica
Peaxi162Scf00007g00285 Petunia axillaris
Peaxi162Scf00788g00034 Petunia axillaris
PGR004G1668 Punica granatum
PGR142G0526 Punica granatum
PGSC0003DMG400006105 Solanum tuberosum
PGSC0003DMG400018365 Solanum tuberosum
Phvul.005G053800 Phaseolus vulgaris
Phvul.006G222000 Phaseolus vulgaris
Phvul.007G135000 Phaseolus vulgaris
Potri.010G078900 Populus trichocarpa
Potri.013G144800 Populus trichocarpa
Pp3c6_24160 Physcomitrium patens
Pp3c6_24167 Physcomitrium patens
Prupe.1G026500 Prunus persica
Prupe.3G233300 Prunus persica
Psat0s1548g0120 Pisum sativum
Psat2g044680 Pisum sativum
Psat6g170520 Pisum sativum
Psat7g237360 Pisum sativum
PSO170G3719 Papaver somniferum
PSO210G1488 Papaver somniferum
PSO528G0065 Papaver somniferum
QL06p014970 Quercus lobata
QL08p037589 Quercus lobata
RcHm_v2.0_Chr2g0162121 Rosa chinensis
RcHm_v2.0_Chr4g0388991 Rosa chinensis
RcHm_v2.0_Chr4g0389031 Rosa chinensis
RcHm_v2.0_Chr4g0389071 Rosa chinensis
RcHm_v2.0_Chr4g0389081 Rosa chinensis
RcHm_v2.0_Chr4g0389161 Rosa chinensis
RcHm_v2.0_Chr4g0389171 Rosa chinensis
Rhsim05G0175800 Rhododendron simsii
Sabra03G0030600 Salix brachista
Sabra03G0044700 Salix brachista
Sabra03G0044800 Salix brachista
Sabra10G0036100 Salix brachista
Sabra10G0064300 Salix brachista
Sabra11G0090800 Salix brachista
Sabra13G0116800 Salix brachista
Sabra15G0052600 Salix brachista
Sabra16G0279300 Salix brachista
Sabra19G0051900 Salix brachista
Sabra19G0052000 Salix brachista
SalBow1G6410 Salvia bowleyana
SalBow1G7344 Salvia bowleyana
SalBow1G7765 Salvia bowleyana
SalBow7G2923 Salvia bowleyana
SalBow7G3419 Salvia bowleyana
SalBow7G3718 Salvia bowleyana
Sc06g0009220 Simmondsia chinensis
Sc19g0003840 Simmondsia chinensis
Sed0003943 Sechium edule
Sed0011590 Sechium edule
SEGI_08322 Sequoiadendron giganteum
SEGI_09387 Sequoiadendron giganteum
SEGI_10062 Sequoiadendron giganteum
SEGI_10485 Sequoiadendron giganteum
SEGI_20909 Sequoiadendron giganteum
SEGI_37914 Sequoiadendron giganteum
SEGI_41252 Sequoiadendron giganteum
SGA_v2.0_scaffold117G32408 Striga asiatica
SGA_v2.0_scaffold79G25620 Striga asiatica
SMO364G0108 Selaginella moellendorffii
Solyc07g054480.3 Solanum lycopersicum
Solyc09g083110.3 Solanum lycopersicum
Sopen07g028420 Solanum pennellii
Sopen09g031990 Solanum pennellii
Sp3g20700 Schrenkiella parvula
Sp5g28900 Schrenkiella parvula
TAR365G0241 Trochodendron aralioides
TAR365G0877 Trochodendron aralioides
TAR365G1015 Trochodendron aralioides
TAR626G0455 Trochodendron aralioides
THA.LOC104808589 Tarenaya hassleriana
THA.LOC104824710 Tarenaya hassleriana
Thecc.02G174000 Theobroma cacao
Thecc.04G243400 Theobroma cacao
Thhalv10019624m.g Eutrema salsugineum
Thhalv10020060m.g Eutrema salsugineum
TPR.G22484 Trifolium pratense
TPR.G26194 Trifolium pratense
TPR.G37719 Trifolium pratense
TPR.G39814 Trifolium pratense
TPR.G9992 Trifolium pratense
TWI09G1194 Tripterygium wilfordii
TWI36G0440 Tripterygium wilfordii
vmacro20006 Vaccinium macrocarpon
VMungo0720G1235 Vigna mungo
VMungo0720G1484 Vigna mungo
VMungo1127G2107 Vigna mungo
Zm00001eb004770 Zea mays
Zm00001eb320050 Zea mays

User provided reference genes

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