Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02460 Brassica napus
A07p24230 Brassica napus
A09p51130 Brassica napus
A09p51140 Brassica napus
Aa31LG10G13180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2631 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2759 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.253 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2428 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2429 Anthoceros agrestis
Actinidia10971 Actinidia chinensis
Actinidia11136 Actinidia chinensis
Actinidia11137 Actinidia chinensis
Ah.01g015690 Amaranthus hybridus
AL5G40370 Arabidopsis lyrata
Aqoxy1G03163 Aquilegia oxysepala
Aqoxy4G00412 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.38NM2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3R4QA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8E16K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1LS51 Arachis hypogaea
AT3G58610 Arabidopsis thaliana
ATR0602G294 Amborella trichopoda
Atru.chr10.1677 Acer truncatum
Atru.chr6.2807 Acer truncatum
AUR62038932 Chenopodium quinoa
AUR62039005 Chenopodium quinoa
BcaB02g07504 Brassica carinata
BcaB02g08246 Brassica carinata
BcaB02g08253 Brassica carinata
BcaC02g10020 Brassica carinata
BcaC07g40209 Brassica carinata
BcaC07g40243 Brassica carinata
BcaC08g44929 Brassica carinata
BolC4t24956H Brassica oleracea
BolC6t37717H Brassica oleracea
BolC8t50992H Brassica oleracea
BraA04t15975Z Brassica rapa
BraA07t30066Z Brassica rapa
BraA09t40558Z Brassica rapa
C04p33900 Brassica napus
C06p25560 Brassica napus
C08p33940 Brassica napus
CAN.G318.11 Capsicum annuum
CAN.G318.12 Capsicum annuum
CAN.G318.15 Capsicum annuum
CAN.G456.21 Capsicum annuum
CAN.G53.21 Capsicum annuum
CAN.G548.17 Capsicum annuum
CAN.G907.27 Capsicum annuum
CANSAT64G0729 Cannabis sativa
CARHR169000 Cardamine hirsuta
Carub.0005s2537 Capsella rubella
Ca_01459_v3 Cicer arietinum L.
Ca_18887_v3 Cicer arietinum L.
Ca_28966_v3 Cicer arietinum L.
CBR_g28546 Chara braunii
Cc05_g08250 Coffea canephora
CDE02G1877 Ceratophyllum demersum
CDE02G2443 Ceratophyllum demersum
CDE04G0506 Ceratophyllum demersum
CDE06G0070 Ceratophyllum demersum
CDE06G0955 Ceratophyllum demersum
CDE06G1117 Ceratophyllum demersum
CDE08G0861 Ceratophyllum demersum
Cfa000602 Carpinus fangiana
Cfa022940 Carpinus fangiana
Cfa025637 Carpinus fangiana
Ciclev10004615m.g Citrus clementina
Ciclev10014720m.g Citrus clementina
Ciclev10017187m.g Citrus clementina
CiPaw.03G187300 Carya illinoinensis
CiPaw.04G132100 Carya illinoinensis
CiPaw.11G165600 Carya illinoinensis
ClCG09G011420 Citrullus lanatus
COL.COLO4_31310 Corchorus olitorius
COL.COLO4_33562 Corchorus olitorius
Cpa.g.sc209.33 Carica papaya
Cre10.g434750 Chlamydomonas reinhardtii
CsaV3_7G005980 Cucumis sativus L.
CSS0000963 Camellia sinensis var. sinensis
CSS0011470 Camellia sinensis var. sinensis
CSS0014425 Camellia sinensis var. sinensis
CSS0019958 Camellia sinensis var. sinensis
CSS0028310 Camellia sinensis var. sinensis
CSS0038790 Camellia sinensis var. sinensis
CSS0040768 Camellia sinensis var. sinensis
CSS0042387 Camellia sinensis var. sinensis
CSS0046001 Camellia sinensis var. sinensis
CSS0050255 Camellia sinensis var. sinensis
CSS0050413 Camellia sinensis var. sinensis
DCAR_013065 Daucus carota
Dinv08789 Davidia involucrata
Dinv15454 Davidia involucrata
Dinv40668 Davidia involucrata
Duzib147G0562 Durio zibethinus
Duzib187G1628 Durio zibethinus
Duzib251G0383 Durio zibethinus
Duzib264G0877 Durio zibethinus
ECA234G3181 Erigeron canadensis
ECA236G2110 Erigeron canadensis
ECA236G3624 Erigeron canadensis
ECA246G3035 Erigeron canadensis
EL10Ac9g20918 Beta vulgaris
Eucgr.K01105 Eucalyptus grandis
FAN02G4596 Fragaria x ananassa
FAN05G4043 Fragaria x ananassa
FAN09G0392 Fragaria x ananassa
FAN14G2780 Fragaria x ananassa
FvH4_6g27150 Fragaria vesca
Glyma.04G181400 Glycine max
Glyma.06G283200 Glycine max
Glyma.06G283251 Glycine max
Glyma.12G122900 Glycine max
Glyma.12G210000 Glycine max
Glyma.13G291300 Glycine max
Gohir.A06G130904 Gossypium hirsutum
Gohir.A07G058900 Gossypium hirsutum
Gohir.A10G000200 Gossypium hirsutum
Gohir.D02G000025 Gossypium hirsutum
Gohir.D06G137000 Gossypium hirsutum
Gohir.D07G063800 Gossypium hirsutum
Gohir.D10G000300 Gossypium hirsutum
Gorai.001G067400 Gossypium raimondii
Gorai.006G234000 Gossypium raimondii
Gorai.010G159200 Gossypium raimondii
Gorai.011G000800 Gossypium raimondii
GSVIVG01020689001 Vitis vinifera
GSVIVG01021204001 Vitis vinifera
GSVIVG01021205001 Vitis vinifera
GSVIVG01024613001 Vitis vinifera
GSVIVG01028770001 Vitis vinifera
HanXRQChr02g0051221 Helianthus annuus
HanXRQChr02g0059141 Helianthus annuus
HanXRQChr03g0067261 Helianthus annuus
HanXRQChr03g0086661 Helianthus annuus
HanXRQChr03g0086961 Helianthus annuus
HanXRQChr06g0171391 Helianthus annuus
HanXRQChr08g0218111 Helianthus annuus
HanXRQChr13g0422371 Helianthus annuus
HanXRQChr16g0526211 Helianthus annuus
HanXRQChr17g0539941 Helianthus annuus
HanXRQChr17g0541211 Helianthus annuus
Haze_06241 Corylus avellana
Haze_13354 Corylus avellana
Hma1.2p1_0178F.1_g078150 Hydrangea macrophylla
HPP92_020168 Vanilla planifolia
HPP92_020179 Vanilla planifolia
HPP92_020180 Vanilla planifolia
Hund07818 Selenicereus undatus
Lalb_Chr14g0367421 Lupinus albus
Lalb_Chr19g0134901 Lupinus albus
Lalb_Chr24g0400091 Lupinus albus
Lalb_Chr24g0400101 Lupinus albus
Lj1A687T18 Lonicera japonica
Lj1C685T11 Lonicera japonica
Lj1C685T12 Lonicera japonica
Lj1C685T9 Lonicera japonica
Lj1C686T12 Lonicera japonica
Lj3g0007429 Lotus japonicus
Lj4A525T25 Lonicera japonica
Lj4A529T7 Lonicera japonica
Lj4A542T8 Lonicera japonica
Lj4A555T34 Lonicera japonica
Lj4P527T7 Lonicera japonica
Lj8C103T21 Lonicera japonica
Lsat_1_v5_gn_3_35820 Lactuca sativa
Manes.13G137600 Manihot esculenta
Manes.16G038300 Manihot esculenta
Manes.17G055100 Manihot esculenta
Mapoly0019s0065 Marchantia polymorpha
MBI06_g25996_MAGBIO Magnolia biondii
MBI07_g33321_MAGBIO Magnolia biondii
MCO07G354 Micromonas commoda
MD09G1239300 Malus domestica
MD17G1231900 Malus domestica
MD17G1232500 Malus domestica
Medtr2g091205 Medicago truncatula
Medtr4g079780 Medicago truncatula
MELO3C018695.2 Cucumis melo
Migut.F01859 Erythranthe guttata
MSTRG.15102 Avicennia marina
MSTRG.6793 Avicennia marina
Nitab4.5_0000359g0170 Nicotiana tabacum
Nitab4.5_0000537g0070 Nicotiana tabacum
Nitab4.5_0003691g0040 Nicotiana tabacum
Nitab4.5_0004426g0050 Nicotiana tabacum
Nitab4.5_0008326g0030 Nicotiana tabacum
Nn1g06764 Nelumbo nucifera
Nn1g09074 Nelumbo nucifera
Oeu006034.2 Olea europaea
Oeu018757.1 Olea europaea
Oeu032706.1 Olea europaea
Oeu054933.1 Olea europaea
Os01g0652600 Oryza sativa ssp. japonica
Os02g0151600 Oryza sativa ssp. japonica
Os05g0573700 Oryza sativa ssp. japonica
Os10g0446800 Oryza sativa ssp. japonica
Peaxi162Scf00384g00421 Petunia axillaris
Peaxi162Scf00469g00138 Petunia axillaris
PGR142G4236 Punica granatum
PGSC0003DMG400007859 Solanum tuberosum
PGSC0003DMG400020446 Solanum tuberosum
Phvul.005G095900 Phaseolus vulgaris
Phvul.011G134200 Phaseolus vulgaris
Potri.004G043700 Populus trichocarpa
Potri.011G052700 Populus trichocarpa
Potri.013G117532 Populus trichocarpa
Potri.014G055100 Populus trichocarpa
Potri.019G089366 Populus trichocarpa
Potri.019G089532 Populus trichocarpa
Pp3c18_1470 Physcomitrium patens
Pp3c19_22360 Physcomitrium patens
Pp3c21_20900 Physcomitrium patens
Pp3c22_20950 Physcomitrium patens
PRCOL_00005526 Prasinoderma coloniale
Prupe.3G122300 Prunus persica
Psat2g088160 Pisum sativum
Psat6g079000 Pisum sativum
Psat7g165680 Pisum sativum
Psat7g165720 Pisum sativum
PSO063G1919 Papaver somniferum
PSO063G2003 Papaver somniferum
PSO782G0144 Papaver somniferum
PSO782G5110 Papaver somniferum
QL08p041474 Quercus lobata
QL11p013354 Quercus lobata
RcHm_v2.0_Chr2g0129141 Rosa chinensis
RcHm_v2.0_Chr2g0144061 Rosa chinensis
RcHm_v2.0_Chr4g0402091 Rosa chinensis
RcHm_v2.0_Chr5g0001751 Rosa chinensis
Rhsim01G0086900 Rhododendron simsii
Rhsim03G0235200 Rhododendron simsii
Sabra04G0027000 Salix brachista
Sabra11G0036600 Salix brachista
Sabra19G0099600 Salix brachista
Sabra19G0100000 Salix brachista
SalBow7G2820 Salvia bowleyana
Sc12g0003470 Simmondsia chinensis
Sc12g0003480 Simmondsia chinensis
Sed0013763 Sechium edule
Sed0023359 Sechium edule
SEGI_00669 Sequoiadendron giganteum
SGA_v2.0_scaffold46G17469 Striga asiatica
SGA_v2.0_scaffold9G04805 Striga asiatica
SMO304G0118 Selaginella moellendorffii
Solyc07g053280.4 Solanum lycopersicum
Solyc12g010840.2 Solanum lycopersicum
Sopen07g027240 Solanum pennellii
Sopen12g006200 Solanum pennellii
Sp5g04260 Schrenkiella parvula
TAR627G1025 Trochodendron aralioides
TAR629G0390 Trochodendron aralioides
THA.LOC104802252 Tarenaya hassleriana
THA.LOC104802896 Tarenaya hassleriana
Thecc.01G149000 Theobroma cacao
Thecc.01G149100 Theobroma cacao
Thecc.06G171800 Theobroma cacao
Thhalv10005853m.g Eutrema salsugineum
TPR.G11127 Trifolium pratense
TPR.G11574 Trifolium pratense
TPR.G14245 Trifolium pratense
TPR.G8455 Trifolium pratense
TWI23G1135 Tripterygium wilfordii
TWI59G0600 Tripterygium wilfordii
TWI59G0834 Tripterygium wilfordii
unitig_62.g23144 Utricularia gibba
vmacro06268 Vaccinium macrocarpon
vmacro12370 Vaccinium macrocarpon
VMungo1080G0354 Vigna mungo
VMungo1127G1240 Vigna mungo
Zm00001eb154700 Zea mays
Zm00001eb158190 Zea mays
Zm00001eb344300 Zea mays

User provided reference genes

Program Settings