Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18990 Brassica napus
A03p68590 Brassica napus
Aa31LG2G12270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3233 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.470 Anthoceros agrestis
Actinidia05762 Actinidia chinensis
Actinidia30924 Actinidia chinensis
AL1G64960 Arabidopsis lyrata
Aqoxy5G00475 Aquilegia oxysepala
Aqoxy6G02478 Aquilegia oxysepala
Aqoxy6G02480 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05WSPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0W6IGB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8NAY1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PGP8Y3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V47NKJ Arachis hypogaea
AT1G54520 Arabidopsis thaliana
ATR0737G105 Amborella trichopoda
Atru.chr2.723 Acer truncatum
Atru.chr3.1216_Atru.chr3.1217 Acer truncatum
Atru.chr5.905 Acer truncatum
AUR62000974 Chenopodium quinoa
AUR62004992 Chenopodium quinoa
BcaC06g31949 Brassica carinata
BcaC09g50560 Brassica carinata
BolC1t02342H Brassica oleracea
BraA01t01842Z Brassica rapa
BraSC39t46201Z Brassica rapa
C01p23920 Brassica napus
CAN.G134.169 Capsicum annuum
CANSAT54G0369 Cannabis sativa
CANSAT78G0261 Cannabis sativa
CARHR055610 Cardamine hirsuta
Carub.0002s0913 Capsella rubella
Carub.0002s0917 Capsella rubella
Carub.0002s0918 Capsella rubella
Carub.0002s0919 Capsella rubella
Ca_09406_v3 Cicer arietinum L.
Ca_15105_v3 Cicer arietinum L.
CBR_g11898 Chara braunii
Cc02_g31530 Coffea canephora
Cc02_g31610 Coffea canephora
CDE10G0348 Ceratophyllum demersum
CDE10G0574 Ceratophyllum demersum
CDE10G1257 Ceratophyllum demersum
Cfa006468 Carpinus fangiana
Ciclev10001390m.g Citrus clementina
CiPaw.07G006900 Carya illinoinensis
CiPaw.08G179100 Carya illinoinensis
ClCG06G009090 Citrullus lanatus
COL.COLO4_04251 Corchorus olitorius
COL.COLO4_04252 Corchorus olitorius
COL.COLO4_04253 Corchorus olitorius
COL.COLO4_04728 Corchorus olitorius
COL.COLO4_04732 Corchorus olitorius
COL.COLO4_15262 Corchorus olitorius
COL.COLO4_15276 Corchorus olitorius
COL.COLO4_15277 Corchorus olitorius
COL.COLO4_15279 Corchorus olitorius
COL.COLO4_15281 Corchorus olitorius
COL.COLO4_15282 Corchorus olitorius
Cpa.g.sc264.12 Carica papaya
Cre01.g004450 Chlamydomonas reinhardtii
Cre11.g467692 Chlamydomonas reinhardtii
Cre11.g467693 Chlamydomonas reinhardtii
Cre11.g468400 Chlamydomonas reinhardtii
CsaV3_1G045680 Cucumis sativus L.
CSS0020760 Camellia sinensis var. sinensis
DCAR_006263 Daucus carota
DCAR_006611 Daucus carota
DCAR_008673 Daucus carota
DCAR_013149 Daucus carota
DCAR_013725 Daucus carota
DCAR_014351 Daucus carota
Dinv11559 Davidia involucrata
Dinv17758 Davidia involucrata
Dinv44533 Davidia involucrata
Duzib128G0462 Durio zibethinus
Duzib151G0609 Durio zibethinus
Duzib177G0067 Durio zibethinus
ECA238G2290 Erigeron canadensis
ECA238G3450 Erigeron canadensis
ECA238G3598 Erigeron canadensis
ECA238G3644 Erigeron canadensis
EL10Ac4g09186 Beta vulgaris
EL10As1g23139 Beta vulgaris
Eucgr.H04386 Eucalyptus grandis
FAN02G1997 Fragaria x ananassa
FAN04G2199 Fragaria x ananassa
FAN05G1585 Fragaria x ananassa
FAN05G1889 Fragaria x ananassa
FAN05G2276 Fragaria x ananassa
FAN05G2994 Fragaria x ananassa
FAN05G3932 Fragaria x ananassa
FAN05G4665 Fragaria x ananassa
FAN05G4815 Fragaria x ananassa
FAN05G5491 Fragaria x ananassa
FAN07G0240 Fragaria x ananassa
FAN07G1131 Fragaria x ananassa
FAN07G2592 Fragaria x ananassa
FAN08G0971 Fragaria x ananassa
FAN08G2952 Fragaria x ananassa
FAN09G1127 Fragaria x ananassa
FAN09G1451 Fragaria x ananassa
FAN09G1742 Fragaria x ananassa
FAN09G2163 Fragaria x ananassa
FAN09G2813 Fragaria x ananassa
FAN09G3215 Fragaria x ananassa
FAN09G3673 Fragaria x ananassa
FAN12G0146 Fragaria x ananassa
FAN12G2920 Fragaria x ananassa
FAN12G4298 Fragaria x ananassa
FAN13G0100 Fragaria x ananassa
FAN13G1811 Fragaria x ananassa
FAN13G3169 Fragaria x ananassa
FAN14G0010 Fragaria x ananassa
FAN14G3559 Fragaria x ananassa
FAN14G3949 Fragaria x ananassa
FAN17G1321 Fragaria x ananassa
FAN17G2294 Fragaria x ananassa
FAN17G2301 Fragaria x ananassa
FAN17G2682 Fragaria x ananassa
FAN18G0393 Fragaria x ananassa
FAN18G3439 Fragaria x ananassa
FAN18G3852 Fragaria x ananassa
FvH4_4g07650 Fragaria vesca
FvH4_4g09430 Fragaria vesca
FvH4_4g23340 Fragaria vesca
FvH4_4g23690 Fragaria vesca
FvH4_5g04910 Fragaria vesca
FvH4_5g29750 Fragaria vesca
FvH4_6g02170 Fragaria vesca
FvH4_6g03490 Fragaria vesca
FvH4_6g03500 Fragaria vesca
FvH4_6g03510 Fragaria vesca
FvH4_6g03520 Fragaria vesca
FvH4_6g03530 Fragaria vesca
Glyma.03G245400 Glycine max
Glyma.11G203600 Glycine max
Glyma.18G047400 Glycine max
Glyma.19G242800 Glycine max
Gohir.A02G032000 Gossypium hirsutum
Gohir.A11G255600 Gossypium hirsutum
Gohir.A11G298700 Gossypium hirsutum
Gohir.D02G038700 Gossypium hirsutum
Gohir.D11G265400 Gossypium hirsutum
Gohir.D11G313500 Gossypium hirsutum
Gorai.005G042600 Gossypium raimondii
Gorai.007G285400 Gossypium raimondii
Gorai.007G344700 Gossypium raimondii
GSVIVG01021855001 Vitis vinifera
HanXRQChr10g0295161 Helianthus annuus
HanXRQChr10g0295171 Helianthus annuus
HanXRQChr10g0295201 Helianthus annuus
HanXRQChr10g0295211 Helianthus annuus
HanXRQChr10g0295231 Helianthus annuus
HanXRQChr14g0446141 Helianthus annuus
Haze_04324 Corylus avellana
Hma1.2p1_0332F.1_g127690 Hydrangea macrophylla
HPP92_023569 Vanilla planifolia
Hund22109 Selenicereus undatus
Lalb_Chr15g0076881 Lupinus albus
Lalb_Chr15g0076891 Lupinus albus
Lalb_Chr15g0085441 Lupinus albus
Lalb_Chr18g0045101 Lupinus albus
Lj1g0020326 Lotus japonicus
Lj6g0007493 Lotus japonicus
Lj6g0008245 Lotus japonicus
Lj6g0015580 Lotus japonicus
Lj7A486G69 Lonicera japonica
Lsat_1_v5_gn_2_65020 Lactuca sativa
Lsat_1_v5_gn_2_65060 Lactuca sativa
Lsat_1_v5_gn_2_65120 Lactuca sativa
Lsat_1_v5_gn_2_65180 Lactuca sativa
Lsat_1_v5_gn_2_65200 Lactuca sativa
Lsat_1_v5_gn_2_65240 Lactuca sativa
Manes.03G179100 Manihot esculenta
Manes.08G127900 Manihot esculenta
Manes.09G156400 Manihot esculenta
Mapoly0007s0090 Marchantia polymorpha
MBI15_g04255_MAGBIO Magnolia biondii
MBI16_g16415_MAGBIO Magnolia biondii
MCO12G238 Micromonas commoda
MD04G1220400 Malus domestica
MD12G1236800 Malus domestica
Medtr3g063940 Medicago truncatula
Medtr3g063950 Medicago truncatula
Medtr7g114660 Medicago truncatula
Medtr8g031500 Medicago truncatula
Medtr8g465010 Medicago truncatula
MELO3C024679.2 Cucumis melo
MELO3C027297.2 Cucumis melo
Migut.N01927 Erythranthe guttata
Migut.N01928 Erythranthe guttata
Migut.N01929 Erythranthe guttata
Migut.N01931 Erythranthe guttata
Migut.N01932 Erythranthe guttata
Migut.O00598 Erythranthe guttata
Nitab4.5_0002361g0140 Nicotiana tabacum
Nitab4.5_0002840g0020 Nicotiana tabacum
Nn1g02312 Nelumbo nucifera
Nn4g26312 Nelumbo nucifera
Oeu021635.2 Olea europaea
Os03g0695500 Oryza sativa ssp. japonica
Os08g0119100 Oryza sativa ssp. japonica
Peaxi162Scf00404g00027 Petunia axillaris
PGR004G0868 Punica granatum
PGSC0003DMG400022472 Solanum tuberosum
Phvul.006G083900 Phaseolus vulgaris
Phvul.006G099600 Phaseolus vulgaris
Potri.005G049500 Populus trichocarpa
Potri.008G152400 Populus trichocarpa
Potri.013G036201 Populus trichocarpa
Pp3c26_130 Physcomitrium patens
Pp3c9_18900 Physcomitrium patens
PRCOL_00000363 Prasinoderma coloniale
Prupe.6G339400 Prunus persica
Psat3g008240 Pisum sativum
Psat5g144480 Pisum sativum
PSO210G6821 Papaver somniferum
PSO210G6908 Papaver somniferum
PSO832G0752 Papaver somniferum
PSO832G1625 Papaver somniferum
QL03p024106 Quercus lobata
QL03p024181 Quercus lobata
QL06p002576 Quercus lobata
QL06p002592 Quercus lobata
QL06p002599 Quercus lobata
QL06p002607 Quercus lobata
RcHm_v2.0_Chr2g0174231 Rosa chinensis
RcHm_v2.0_Chr3g0451981 Rosa chinensis
RcHm_v2.0_Chr3g0451991 Rosa chinensis
RcHm_v2.0_Chr3g0452001 Rosa chinensis
RcHm_v2.0_Chr3g0452011 Rosa chinensis
RcHm_v2.0_Chr3g0452041 Rosa chinensis
RcHm_v2.0_Chr3g0452111 Rosa chinensis
RcHm_v2.0_Chr3g0452121 Rosa chinensis
Rhsim03G0069300 Rhododendron simsii
Rhsim07G0175700 Rhododendron simsii
Sabra05G0044700 Salix brachista
Sabra15G0050500 Salix brachista
Sabra15G0074400 Salix brachista
SalBow3G1967 Salvia bowleyana
Sc20g0000230 Simmondsia chinensis
Sed0022641 Sechium edule
Sed0025137 Sechium edule
SEGI_00249 Sequoiadendron giganteum
SEGI_20824 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40956 Striga asiatica
SMO337G0037 Selaginella moellendorffii
Solyc01g097860.4 Solanum lycopersicum
Sopen01g041460 Solanum pennellii
SpUn0001_0400 Schrenkiella parvula
TAR142G0001 Trochodendron aralioides
TAR365G1134 Trochodendron aralioides
THA.LOC104821125 Tarenaya hassleriana
Thecc.04G231500 Theobroma cacao
Thecc.05G289000 Theobroma cacao
Thhalv10023608m.g Eutrema salsugineum
Thhalv10023937m.g Eutrema salsugineum
TPR.G37432 Trifolium pratense
TPR.G5466 Trifolium pratense
TPR.G6975 Trifolium pratense
TWI36G0925 Tripterygium wilfordii
unitig_899.g15577 Utricularia gibba
vmacro05069 Vaccinium macrocarpon
vmacro18086 Vaccinium macrocarpon
vmacro18108 Vaccinium macrocarpon
VMungo0540G0191 Vigna mungo
VMungo0540G0316 Vigna mungo
Zm00001eb053770 Zea mays
Zm00001eb060740 Zea mays
Zm00001eb217000 Zea mays
Zm00001eb349380 Zea mays

User provided reference genes

Program Settings